FFCP PHASE1:Hg19::chr8:57354124..57354145,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:57354124..57354145,-
|short_description=p@chr8:57354124..57354145,-
|description=CAGE_peak_at_chr8:57354124..57354145,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:57354124..57354145,- | |||
|coexpression_cluster_id=C309 | |||
|description=CAGE_peak_at_chr8:57354124..57354145,- | |||
|id=chr8:57354124..57354145,- | |||
|ontology_enrichment_celltype=CL:0000153!1.17e-14!9;CL:0000447!1.17e-14!9;CL:0000667!5.33e-12!6;CL:0000058!5.33e-12!6;CL:0000138!5.33e-12!6;CL:0000135!3.32e-09!3;CL:0000386!3.32e-09!3;CL:0000388!3.32e-09!3;CL:0000327!5.64e-09!14;CL:0000499!2.06e-08!27;CL:0002556!1.65e-07!6;CL:0002540!5.71e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000138;1.28e-24;6!CL:0000153;3.00e-23;9!CL:0000447;3.00e-23;9!CL:0000135;5.33e-18;3!CL:0000388;5.33e-18;3!CL:0000499;1.67e-15;28!CL:0000327;9.88e-14;15!CL:0000062;1.85e-10;9!CL:0002556;1.37e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,1.22e-24,6;CL:0000138,1.22e-24,6;CL:0000153,3.00e-23,9;CL:0000447,3.00e-23,9;CL:0000135,4.23e-18,3;CL:0000388,4.23e-18,3;CL:0000499,1.56e-15,28;CL:0000327,9.89e-14,15;CL:0002556,1.37e-09,6;CL:0000062,1.57e-08,11;CL:0000375,1.57e-08,11;CL:0000335,1.57e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000335;1.42e-08;11!UBERON:0003099;1.45e-07;1!UBERON:0003852;1.45e-07;1!UBERON:0006222;2.37e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000369!4.70e-11!4;UBERON:0002435!4.70e-11!4;UBERON:0000204!4.70e-11!4;UBERON:0010082!4.70e-11!4;UBERON:0009663!2.53e-09!7;UBERON:0000043!3.32e-09!3;UBERON:0005383!5.23e-09!3;UBERON:0005382!5.23e-09!3;UBERON:0002240!1.97e-08!3;UBERON:0001758!1.65e-07!6;UBERON:0003672!1.65e-07!6;UBERON:0002308!3.73e-07!9;UBERON:0002420!3.73e-07!9;UBERON:0000125!3.73e-07!9;UBERON:0007245!3.73e-07!9;UBERON:0010009!3.73e-07!9;UBERON:0010011!3.73e-07!9;UBERON:0000454!3.73e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;5.33e-18;3!UBERON:0000043;5.33e-18;3!UBERON:0007845;5.33e-18;3!UBERON:0001758;1.37e-09;6!UBERON:0003672;1.37e-09;6!UBERON:0011137;5.45e-09;11!UBERON:0010323;5.45e-09;11!UBERON:0005383;9.26e-09;3!UBERON:0005382;9.26e-09;3!UBERON:0003129;2.78e-08;7!UBERON:0005705;1.45e-07;1!UBERON:0008193;1.45e-07;1!UBERON:0010912;1.45e-07;1!UBERON:0002514;1.45e-07;1!UBERON:0003457;1.45e-07;1!UBERON:0008907;1.45e-07;1!UBERON:0008001;1.45e-07;1!UBERON:0007213;1.45e-07;1!UBERON:0009891;1.45e-07;1!UBERON:0007914;1.45e-07;1!UBERON:0007375;1.45e-07;1!UBERON:0003323;1.45e-07;1!UBERON:0010258;1.45e-07;1!UBERON:0005253;1.45e-07;1!UBERON:0007842;1.45e-07;1!UBERON:0002397;1.45e-07;1!UBERON:0003113;1.45e-07;1!UBERON:0003277;1.45e-07;1!UBERON:0001709;1.45e-07;1!UBERON:0002244;1.45e-07;1!UBERON:0005620;1.45e-07;1!UBERON:0010364;1.45e-07;1!UBERON:0004288;1.45e-07;1!UBERON:0001874;4.18e-07;1!UBERON:0000369;9.08e-07;4!UBERON:0002435;9.08e-07;4!UBERON:0000204;9.08e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,4.23e-18,3;UBERON:0000043,4.23e-18,3;UBERON:0007845,4.23e-18,3;UBERON:0001758,1.37e-09,6;UBERON:0003672,1.37e-09,6;UBERON:0010323,5.45e-09,11;UBERON:0005383,7.48e-09,3;UBERON:0005382,7.48e-09,3;UBERON:0003129,2.78e-08,7;UBERON:0005705,1.46e-07,1;UBERON:0008193,1.46e-07,1;UBERON:0010912,1.46e-07,1;UBERON:0002514,1.46e-07,1;UBERON:0003457,1.46e-07,1;UBERON:0008907,1.46e-07,1;UBERON:0008001,1.46e-07,1;UBERON:0007213,1.46e-07,1;UBERON:0009891,1.46e-07,1;UBERON:0007914,1.46e-07,1;UBERON:0009292,1.46e-07,1;UBERON:0003099,1.46e-07,1;UBERON:0007375,1.46e-07,1;UBERON:0003323,1.46e-07,1;UBERON:0010258,1.46e-07,1;UBERON:0007842,1.46e-07,1;UBERON:0009494,1.46e-07,1;UBERON:0010042,1.46e-07,1;UBERON:0010045,1.46e-07,1;UBERON:0010259,1.46e-07,1;UBERON:0010359,1.46e-07,1;UBERON:0009526,1.46e-07,1;UBERON:0002397,1.46e-07,1;UBERON:0003113,1.46e-07,1;UBERON:0003277,1.46e-07,1;UBERON:0001709,1.46e-07,1;UBERON:0004066,1.46e-07,1;UBERON:0002244,1.46e-07,1;UBERON:0005620,1.46e-07,1;UBERON:0004362,1.46e-07,1;UBERON:0010364,1.46e-07,1;UBERON:0010046,1.46e-07,1;UBERON:0005868,1.46e-07,1;UBERON:0007238,1.46e-07,1;UBERON:0004288,1.46e-07,1;UBERON:0004068,1.46e-07,1;UBERON:0010334,1.46e-07,1;UBERON:0003852,1.46e-07,1;UBERON:0010253,1.46e-07,1;UBERON:0001874,3.20e-07,1;UBERON:0011137,4.51e-07,14;UBERON:0000369,7.75e-07,4;UBERON:0002435,7.75e-07,4;UBERON:0000204,7.75e-07,4;UBERON:0010082,7.75e-07,4;UBERON:0000165,8.07e-07,29;UBERON:0000930,8.07e-07,29 | |||
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| ||
|short_description=p@chr8:57354124..57354145,- | |||
}} | }} |
Latest revision as of 19:02, 31 July 2015
Short description: | p@chr8:57354124..57354145, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:57354124..57354145, - |
Coexpression cluster: | C309_normal_Chondrocyte_small_Fibroblast_tenocyte_neuroepithelioma_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.22e-24 | 6 |
chondrocyte | 1.22e-24 | 6 |
GAG secreting cell | 3.00e-23 | 9 |
carbohydrate secreting cell | 3.00e-23 | 9 |
fibrocyte | 4.23e-18 | 3 |
tendon cell | 4.23e-18 | 3 |
stromal cell | 1.56e-15 | 28 |
extracellular matrix secreting cell | 9.89e-14 | 15 |
fibroblast of periodontium | 1.37e-09 | 6 |
osteoblast | 1.57e-08 | 11 |
osteoprogenitor cell | 1.57e-08 | 11 |
mesenchyme condensation cell | 1.57e-08 | 11 |