FFCP PHASE1:Hg19::chr8:128387795..128387801,+: Difference between revisions
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|id=chr8:128387795..128387801,+
|short_description=p@chr8:128387795..128387801,+
|description=CAGE_peak_at_chr8:128387795..128387801,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:128387795..128387801,+ | |||
|description=CAGE_peak_at_chr8:128387795..128387801,+ | |||
|id=chr8:128387795..128387801,+ | |||
|ontology_enrichment_celltype=CL:0002551!2.39e-28!6;CL:0002620!2.16e-18!23;CL:0000057!7.76e-14!75;CL:0000188!1.69e-12!9;CL:0000055!4.78e-12!180;CL:0002600!1.68e-10!2;CL:0000317!3.86e-10!2;CL:1000448!3.86e-10!2;CL:0002308!3.86e-10!2;CL:0002140!3.86e-10!2;CL:0002582!5.82e-07!3;CL:0000594!7.83e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002551;8.05e-53;6!CL:0002600;2.37e-25;2!CL:0002620;7.92e-14;23!CL:0002552;6.97e-11;5!CL:0000057;1.14e-07;73!CL:0002367;1.99e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002551,8.06e-53,6;CL:0002600,1.85e-25,2;CL:0002620,7.92e-14,23;CL:0002552,7.51e-11,5;CL:0000057,8.30e-10,76;CL:0002367,1.64e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002067!1.08e-18!9;UBERON:0004016!1.08e-18!9;UBERON:0010083!1.08e-18!9;UBERON:0002199!4.36e-17!45;UBERON:0002416!4.36e-17!45;UBERON:0002097!1.01e-16!40;UBERON:0003102!4.26e-13!95;UBERON:0000914!1.19e-10!83;UBERON:0002329!1.19e-10!83;UBERON:0003077!1.19e-10!83;UBERON:0003059!1.19e-10!83;UBERON:0007282!1.19e-10!83;UBERON:0009618!1.19e-10!83;UBERON:0007285!1.19e-10!83;UBERON:0002419!3.86e-10!2;UBERON:0007771!3.86e-10!2;UBERON:0003297!3.86e-10!2;UBERON:0001821!3.86e-10!2;UBERON:0003487!3.86e-10!2;UBERON:0001820!3.86e-10!2;UBERON:0005089!3.86e-10!2;UBERON:0005088!3.86e-10!2;UBERON:0004290!6.20e-10!70;UBERON:0000486!4.81e-08!82;UBERON:0000475!6.59e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;2.83e-35;9!UBERON:0004923;6.21e-09;55!UBERON:0003126;6.29e-08;7!UBERON:0001005;6.29e-08;7!UBERON:0005969;1.99e-07;2!UBERON:0003956;1.99e-07;2!UBERON:0001828;3.96e-07;8!UBERON:0003102;6.18e-07;50!UBERON:0002199;8.56e-07;46!UBERON:0002416;8.56e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,2.83e-35,9;UBERON:0004016,2.83e-35,9;UBERON:0010083,2.83e-35,9;UBERON:0002329,2.86e-13,71;UBERON:0003059,2.86e-13,71;UBERON:0007282,2.86e-13,71;UBERON:0004290,2.86e-13,71;UBERON:0009618,2.86e-13,71;UBERON:0003077,4.51e-13,72;UBERON:0007285,4.51e-13,72;UBERON:0007524,7.03e-13,73;UBERON:0007503,5.47e-12,78;UBERON:0000486,3.33e-11,83;UBERON:0002199,1.24e-09,46;UBERON:0002416,1.24e-09,46;UBERON:0003102,2.74e-09,99;UBERON:0004923,8.53e-09,66;UBERON:0003126,5.87e-08,7;UBERON:0001005,5.87e-08,7;UBERON:0002097,1.02e-07,41;UBERON:0005969,1.64e-07,2;UBERON:0003956,1.64e-07,2;UBERON:0005256,2.79e-07,122;UBERON:0000490,3.21e-07,148;UBERON:0001828,4.15e-07,8 | |||
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| ||
|short_description=p@chr8:128387795..128387801,+ | |||
}} | }} |
Latest revision as of 14:53, 31 July 2015
Short description: | p@chr8:128387795..128387801, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:128387795..128387801, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of dermis | 8.06e-53 | 6 |
smooth muscle cell of trachea | 1.85e-25 | 2 |
skin fibroblast | 7.92e-14 | 23 |
fibroblast of gingiva | 7.51e-11 | 5 |
fibroblast | 8.30e-10 | 76 |
trabecular meshwork cell | 1.64e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
dermis | 2.83e-35 | 9 |
dermatome | 2.83e-35 | 9 |
future dermis | 2.83e-35 | 9 |
somite | 2.86e-13 | 71 |
presomitic mesoderm | 2.86e-13 | 71 |
presumptive segmental plate | 2.86e-13 | 71 |
dermomyotome | 2.86e-13 | 71 |
trunk paraxial mesoderm | 2.86e-13 | 71 |
paraxial mesoderm | 4.51e-13 | 72 |
presumptive paraxial mesoderm | 4.51e-13 | 72 |
dense mesenchyme tissue | 7.03e-13 | 73 |
epithelial vesicle | 5.47e-12 | 78 |
multilaminar epithelium | 3.33e-11 | 83 |
integument | 1.24e-09 | 46 |
integumental system | 1.24e-09 | 46 |
surface structure | 2.74e-09 | 99 |
organ component layer | 8.53e-09 | 66 |
trachea | 5.87e-08 | 7 |
respiratory airway | 5.87e-08 | 7 |
skin of body | 1.02e-07 | 41 |
reticulum trabeculare | 1.64e-07 | 2 |
aqueous drainage system | 1.64e-07 | 2 |
trunk mesenchyme | 2.79e-07 | 122 |
unilaminar epithelium | 3.21e-07 | 148 |
gingiva | 4.15e-07 | 8 |