FFCP PHASE1:Hg19::chr8:11314255..11314271,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:11314255..11314271,- | |||
|coexpression_cluster_id=C959 | |coexpression_cluster_id=C959 | ||
|description=CAGE_peak_at_chr8:11314255..11314271,- | |description=CAGE_peak_at_chr8:11314255..11314271,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.30e-51;5 | |ontology_enrichment_development_v019=UBERON:0007123;2.30e-51;5 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3112;1.33e-29;1 | |ontology_enrichment_disease_v019=DOID:3112;1.33e-29;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3112,1.33e-29,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.25e-15!57;UBERON:0005068!1.25e-15!57;UBERON:0006241!1.25e-15!57;UBERON:0007135!1.25e-15!57;UBERON:0002616!1.83e-13!59;UBERON:0002020!6.47e-12!34;UBERON:0003528!6.47e-12!34;UBERON:0000073!6.97e-12!94;UBERON:0001016!6.97e-12!94;UBERON:0002780!1.42e-11!41;UBERON:0001890!1.42e-11!41;UBERON:0006240!1.42e-11!41;UBERON:0003080!3.76e-11!42;UBERON:0000955!6.37e-11!69;UBERON:0006238!6.37e-11!69;UBERON:0002791!6.90e-11!33;UBERON:0001893!2.04e-10!34;UBERON:0001017!3.45e-10!82;UBERON:0002619!4.35e-10!22;UBERON:0005743!5.83e-10!86;UBERON:0007023!6.61e-10!115;UBERON:0001869!5.57e-09!32;UBERON:0002046!8.50e-09!5;UBERON:0004117!8.50e-09!5;UBERON:0007689!8.50e-09!5;UBERON:0007123!8.50e-09!5;UBERON:0003091!8.50e-09!5;UBERON:0003075!1.19e-08!86;UBERON:0007284!1.19e-08!86;UBERON:0000956!1.84e-08!25;UBERON:0000203!1.84e-08!25;UBERON:0001950!4.78e-08!20;UBERON:0002346!6.79e-08!90 | |ontology_enrichment_uberon=UBERON:0001049!1.25e-15!57;UBERON:0005068!1.25e-15!57;UBERON:0006241!1.25e-15!57;UBERON:0007135!1.25e-15!57;UBERON:0002616!1.83e-13!59;UBERON:0002020!6.47e-12!34;UBERON:0003528!6.47e-12!34;UBERON:0000073!6.97e-12!94;UBERON:0001016!6.97e-12!94;UBERON:0002780!1.42e-11!41;UBERON:0001890!1.42e-11!41;UBERON:0006240!1.42e-11!41;UBERON:0003080!3.76e-11!42;UBERON:0000955!6.37e-11!69;UBERON:0006238!6.37e-11!69;UBERON:0002791!6.90e-11!33;UBERON:0001893!2.04e-10!34;UBERON:0001017!3.45e-10!82;UBERON:0002619!4.35e-10!22;UBERON:0005743!5.83e-10!86;UBERON:0007023!6.61e-10!115;UBERON:0001869!5.57e-09!32;UBERON:0002046!8.50e-09!5;UBERON:0004117!8.50e-09!5;UBERON:0007689!8.50e-09!5;UBERON:0007123!8.50e-09!5;UBERON:0003091!8.50e-09!5;UBERON:0003075!1.19e-08!86;UBERON:0007284!1.19e-08!86;UBERON:0000956!1.84e-08!25;UBERON:0000203!1.84e-08!25;UBERON:0001950!4.78e-08!20;UBERON:0002346!6.79e-08!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0002046;2.30e-51;5!UBERON:0000007;2.21e-15;2!UBERON:0002368;5.88e-15;33!UBERON:0003296;2.35e-08;4!UBERON:0010133;2.35e-08;4 | |ontology_enrichment_uberon_v019=UBERON:0002046;2.30e-51;5!UBERON:0000007;2.21e-15;2!UBERON:0002368;5.88e-15;33!UBERON:0003296;2.35e-08;4!UBERON:0010133;2.35e-08;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,2.30e-51,5;UBERON:0004117,2.30e-51,5;UBERON:0007689,2.30e-51,5;UBERON:0007123,2.30e-51,5;UBERON:0003091,2.30e-51,5;UBERON:0009722,7.14e-24,11;UBERON:0007690,7.14e-24,11;UBERON:0000007,1.78e-15,2;UBERON:0008814,6.53e-15,18;UBERON:0002368,1.80e-13,35;UBERON:0000949,1.37e-10,45;UBERON:0003296,2.11e-08,4;UBERON:0010133,2.11e-08,4;UBERON:0002530,3.49e-08,59 | |||
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| ||
|short_description=p@chr8:11314255..11314271,- | |short_description=p@chr8:11314255..11314271,- | ||
}} | }} |
Latest revision as of 14:05, 31 July 2015
Short description: | p@chr8:11314255..11314271, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:11314255..11314271, - |
Coexpression cluster: | C959_small_thyroid_Smooth_Burkitt_Fibroblast_pineal_papillary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thyroid gland | 2.30e-51 | 5 |
pharyngeal pouch | 2.30e-51 | 5 |
thyroid diverticulum | 2.30e-51 | 5 |
pharyngeal pouch 2 | 2.30e-51 | 5 |
thyroid primordium | 2.30e-51 | 5 |
entire pharyngeal arch endoderm | 7.14e-24 | 11 |
early pharyngeal endoderm | 7.14e-24 | 11 |
pituitary gland | 1.78e-15 | 2 |
pharyngeal arch system | 6.53e-15 | 18 |
endocrine gland | 1.80e-13 | 35 |
endocrine system | 1.37e-10 | 45 |
gland of diencephalon | 2.11e-08 | 4 |
neuroendocrine gland | 2.11e-08 | 4 |
gland | 3.49e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 1.33e-29 | 1 |