FFCP PHASE1:Hg19::chr7:38375259..38375289,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-22bp_to_uc010kxk.1_5end | |association_with_transcript=-22bp_to_uc010kxk.1_5end | ||
|cluster_id=chr7:38375259..38375289,- | |||
|coexpression_cluster_id=C1996 | |||
|description=CAGE_peak_2_at_uc010kxk.1_5end | |description=CAGE_peak_2_at_uc010kxk.1_5end | ||
|id=chr7:38375259..38375289,- | |id=chr7:38375259..38375289,- | ||
|ontology_enrichment_celltype=CL:0000738!5.59e-18!140;CL:0002087!6.07e-18!119;CL:0000037!1.06e-17!172;CL:0000566!1.06e-17!172;CL:0002032!2.12e-16!165;CL:0000837!2.12e-16!165;CL:0000988!2.40e-16!182;CL:0002031!3.57e-16!124;CL:0000625!2.97e-12!11;CL:0000791!4.05e-11!18;CL:0000789!4.05e-11!18;CL:0002420!4.05e-11!18;CL:0002419!4.05e-11!18;CL:0000790!4.05e-11!18;CL:0000838!8.76e-10!52;CL:0000084!1.22e-09!25;CL:0000827!1.22e-09!25;CL:0000542!2.11e-09!53;CL:0000051!2.11e-09!53;CL:0000766!1.16e-08!76;CL:0000763!4.74e-08!112;CL:0000049!4.74e-08!112;CL:0000839!6.03e-08!70;CL:0000557!1.11e-07!71;CL:0002194!1.32e-07!63;CL:0000576!1.32e-07!63;CL:0000040!1.32e-07!63;CL:0000559!1.32e-07!63;CL:0002009!4.51e-07!65 | |ontology_enrichment_celltype=CL:0000738!5.59e-18!140;CL:0002087!6.07e-18!119;CL:0000037!1.06e-17!172;CL:0000566!1.06e-17!172;CL:0002032!2.12e-16!165;CL:0000837!2.12e-16!165;CL:0000988!2.40e-16!182;CL:0002031!3.57e-16!124;CL:0000625!2.97e-12!11;CL:0000791!4.05e-11!18;CL:0000789!4.05e-11!18;CL:0002420!4.05e-11!18;CL:0002419!4.05e-11!18;CL:0000790!4.05e-11!18;CL:0000838!8.76e-10!52;CL:0000084!1.22e-09!25;CL:0000827!1.22e-09!25;CL:0000542!2.11e-09!53;CL:0000051!2.11e-09!53;CL:0000766!1.16e-08!76;CL:0000763!4.74e-08!112;CL:0000049!4.74e-08!112;CL:0000839!6.03e-08!70;CL:0000557!1.11e-07!71;CL:0002194!1.32e-07!63;CL:0000576!1.32e-07!63;CL:0000040!1.32e-07!63;CL:0000559!1.32e-07!63;CL:0002009!4.51e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000625;7.79e-33;11!CL:0000791;1.06e-26;18!CL:0000789;1.06e-26;18!CL:0002419;1.06e-26;18!CL:0000084;1.91e-21;25!CL:0000623;1.45e-10;3!CL:0000767;1.00e-09;3!CL:0000226;1.51e-09;3!CL:0000842;1.51e-09;3!CL:0002619;2.52e-09;3!CL:0000542;3.52e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,4.80e-33,11;CL:0000791,9.26e-27,18;CL:0000789,9.26e-27,18;CL:0002420,9.26e-27,18;CL:0002419,9.26e-27,18;CL:0000790,9.26e-27,18;CL:0000084,1.74e-21,25;CL:0000827,1.74e-21,25;CL:0000838,9.75e-19,52;CL:0000542,2.79e-18,53;CL:0000051,2.79e-18,53;CL:0002087,1.55e-15,115;CL:0000738,2.39e-15,136;CL:0000037,8.93e-12,168;CL:0002031,3.84e-11,120;CL:0000988,9.36e-11,177;CL:0000623,1.48e-10,3;CL:0000825,1.48e-10,3;CL:0002032,7.93e-10,161;CL:0000837,7.93e-10,161;CL:0000767,1.04e-09,3;CL:0000226,1.10e-09,3;CL:0000842,1.10e-09,3;CL:0002619,1.98e-09,3;CL:0000893,5.66e-07,2;CL:0002489,5.66e-07,2;CL:0000809,5.66e-07,2;CL:0000808,5.66e-07,2;CL:0000894,5.66e-07,2;CL:0000806,5.66e-07,2;CL:0000807,5.66e-07,2;CL:0000805,5.66e-07,2;CL:0002425,5.66e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.06e-26;18!CL:0000051;3.52e-09;53!CL:0002425;4.25e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.57e-17!102;UBERON:0003061!7.57e-17!102;UBERON:0002193!3.12e-15!112;UBERON:0007023!1.23e-12!115;UBERON:0000178!1.89e-12!15;UBERON:0000179!1.89e-12!15;UBERON:0000463!1.89e-12!15;UBERON:0002371!7.52e-07!80 | |ontology_enrichment_uberon=UBERON:0002390!7.57e-17!102;UBERON:0003061!7.57e-17!102;UBERON:0002193!3.12e-15!112;UBERON:0007023!1.23e-12!115;UBERON:0000178!1.89e-12!15;UBERON:0000179!1.89e-12!15;UBERON:0000463!1.89e-12!15;UBERON:0002371!7.52e-07!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.51e-27;15!UBERON:0000179;1.51e-27;15!UBERON:0000463;1.51e-27;15!UBERON:0002390;1.95e-21;32!UBERON:0002193;2.77e-13;42!UBERON:0004177;3.12e-09;5!UBERON:0005057;3.12e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.12e-27,15;UBERON:0000179,1.12e-27,15;UBERON:0000463,1.12e-27,15;UBERON:0004177,5.64e-14,7;UBERON:0005057,5.64e-14,7;UBERON:0002390,2.47e-13,98;UBERON:0003061,2.47e-13,98;UBERON:0002193,1.14e-12,108;UBERON:0002370,1.94e-11,4;UBERON:0005058,1.94e-11,4;UBERON:0009113,1.94e-11,4;UBERON:0003295,1.94e-11,4;UBERON:0005562,1.94e-11,4;UBERON:0003351,1.21e-07,6 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60468152070698,1.31360943119913,1.73163718890094,2.36018566109342,5.75744097145819,2.01260960310899,0,0,0,0.309868802321207,0,0.587200878669695,0.553995408531877,1.40381113229099,2.38711957787437,2.23915474239924,1.6194683300949,2.31818010870768,0.872389432677388,0,0.970336244751265,0.464858073811369,0,0,0,0,0,0,0.645484683583826,0,0.941211697713023,0.545812300115692,0.224723484445085,0,0.641858054152187,0,0.329851300186716,0.398927315243264,0,0.290209238628584,0.56738522469114,0.622822248995575,0,0,0.217188844705117,0,0,0,0,0.212604299965044,0.419317291016752,0,0.300353785683013,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0.263384084775077,0.196709770113833,0,0,0,0,0,0,1.00269411196656,0.294605907474837,0.221533894583621,0,0.128091319725675,0.260118695119756,1.64437904603676,0.276350017785848,0.869409257205157,0,0,0,1.24640276967323,1.14966148080576,4.46715679127419,2.27717722817553,8.28270077242652,12.370585623272,14.2567806667256,9.937957859133,14.4624870604493,7.49584359314075,13.969857870597,6.56902397536837,8.26587647221403,1.60464117470104,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.982343066232845,0,0,0.324547393654683,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0,0,0.168776332241266,0.194874010322397,0.252433774244115,0,0.646584227275248,0,0,0.339121184620975,0,0,0,0.487894824518382,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,1.23108503043699,0.468008530278475,0.594524649154913,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0.87192013766656,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.399891964728228,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0.179060963239896,16.2523458790615,14.5802762549426,7.11570997036407,11.5508732651774,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0,0.35142424497814,0,0,0,0,0,0.260650843404249,0,0,3.10152039184331,1.72571360654893,5.12292277456533,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0.177561725313127,0.246381468041427,0,0.232420756919918,0,0,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0.137836572484531,0.214840489736547,0,0.170453254832202,0.0890320356467374,0,0,0,0,0,1.5740617341532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,5.58192370155386,7.64637207142375,6.26611905891579,10.2439663446849,7.4045209155515,7.78167973431261,3.7802200606668,6.34500141035416,0,0,0,0,0,0,9.72500263645816,1.79621434289535,0.957526850661834,0,0.324621940274555,0.280797178113459,0.456469358066384,0.156679895773023,0,0.846458889008016,0,0,0,0,0,0.223676107892416,0.166849141711909,0.390776190804081,0,0,0,0,0,0,0.586032717087576,0.121360521749513,0,0,0,0,0,0,0,0,0.16480387422676,0.211125408127993,0.796991953004279,1.10513566212459,0,0,0,0,0,0,0.511572370226872,0.197286811273867,14.3689855408164,2.22273980289274,0,0.0927680981618513,0,0,0,0,0,0,0,0,2.33283690706603,0,0,0,0,0,0.295547618953547,0,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0.167821586975843,0,0.158936578980379,0,0,0,0,0,1.41532103205343,1.22206028986725,0,0.247127877893006,0.417687798021821,0.134802265961354,0.802577647298789,0,0.182454789215666,0,0,0,1.20990716048664,0,0.568679216656392,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0.171986032471617,0,0,0,0.290967049465258,0,0,0,0.19871461170299,0.0633107959558787,0,0,1.49417096317547,0,0,0,0,0,0.248505071130865,0,0.543616824294456,0.104602846312333,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0.169346664131569,0,0,0,0.137539436597234,0,0,0,0,0,0.394028536495991,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,1.36310417428337,0.113312091520126,0.439656701034247,0,0.517131825446202,0.13223260174269,0.171086837884329,0,3.09683496446315,0.157204305099666,1.24271716604159,2.97699613087171,0,0.60896299190448,0,0,0,0,0,0,0,0,0.1251909307065,0,0.554645257684261,0.496771223531068,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0.310525913752519,0,0,0.521745061811734,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0.389720617678777,0.265729680626726,0,0,0,0,0.39997479170986,0.213383459388282,0,0,0.368211900503681,0,0,0,0,0,0,0,0.212574920101683,0.495743057036009,1.11728983594649,0,0.157723490002507,0,0,0,0.256916900385838,0,0,0,0,0.138314504928436,0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| ||
|short_description=p2@uc010kxk.1 | |short_description=p2@uc010kxk.1 | ||
}} | }} |
Latest revision as of 09:53, 31 July 2015
Short description: | p2@uc010kxk.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_uc010kxk.1_5end |
Coexpression cluster: | C1996_Natural_CD8_NK_CD4_Peripheral_blood_Whole |
Association with transcript: | -22bp_to_uc010kxk.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 1.12e-27 | 15 |
haemolymphatic fluid | 1.12e-27 | 15 |
organism substance | 1.12e-27 | 15 |
hemopoietic organ | 5.64e-14 | 7 |
immune organ | 5.64e-14 | 7 |
hematopoietic system | 2.47e-13 | 98 |
blood island | 2.47e-13 | 98 |
hemolymphoid system | 1.14e-12 | 108 |
thymus | 1.94e-11 | 4 |
hemolymphoid system gland | 1.94e-11 | 4 |
thymic region | 1.94e-11 | 4 |
pharyngeal gland | 1.94e-11 | 4 |
thymus primordium | 1.94e-11 | 4 |
pharyngeal epithelium | 1.21e-07 | 6 |