FFCP PHASE1:Hg19::chr7:119547421..119547435,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000426413,ENST00000431071_5end | |association_with_transcript=0bp_to_ENST00000426413,ENST00000431071_5end | ||
|cluster_id=chr7:119547421..119547435,- | |||
|description=CAGE_peak_1_at_ENST00000426413_5end,CAGE_peak_1_at_ENST00000431071_5end | |description=CAGE_peak_1_at_ENST00000426413_5end,CAGE_peak_1_at_ENST00000431071_5end | ||
|id=chr7:119547421..119547435,- | |id=chr7:119547421..119547435,- | ||
|ontology_enrichment_celltype=CL:0000039;4.70e-17;7!CL:0000586;4.70e-17;7!CL:0000182;2.93e-13;12!CL:0000054;2.40e-10;2!CL:0000137;2.40e-10;2!CL:0000092;2.40e-10;2 | |ontology_enrichment_celltype=CL:0000039!2.60e-17!7;CL:0000586!2.60e-17!7;CL:0000181!1.58e-09!12;CL:0000417!1.58e-09!12;CL:0000668!1.58e-09!12;CL:0000414!1.58e-09!12;CL:0000412!1.58e-09!12;CL:0000182!1.58e-09!12;CL:0000054!7.96e-08!2;CL:0000137!7.96e-08!2;CL:0000092!7.96e-08!2 | ||
| | |ontology_enrichment_celltype_v019=CL:0000039;4.70e-17;7!CL:0000586;4.70e-17;7!CL:0000182;2.93e-13;12!CL:0000054;2.40e-10;2!CL:0000137;2.40e-10;2!CL:0000092;2.40e-10;2 | ||
|ontology_enrichment_disease=DOID:1036;2.30e-10;8!DOID:200;2.40e-10;2!DOID:4305;2.40e-10;2!DOID:3095;6.43e-10;22!DOID:2994;6.43e-10;22!DOID:201;2.01e-07;6!DOID:0060100;2.01e-07;6 | |ontology_enrichment_celltype_v019_2=CL:0000039,4.62e-17,7;CL:0000586,4.62e-17,7;CL:0000182,2.83e-13,12;CL:0000054,2.40e-10,2;CL:0000137,2.40e-10,2;CL:0000092,2.40e-10,2 | ||
|ontology_enrichment_uberon=UBERON:0000473;1.04e-14;8!UBERON:0003135;1.25e-10;11!UBERON:0002423;3.27e-08;25!UBERON:0002107;3.67e-08;19!UBERON:0006925;3.67e-08;19 | |ontology_enrichment_development_v019=UBERON:0004161;1.62e-14;11!UBERON:0009497;3.39e-12;13!UBERON:0009117;1.02e-11;10!UBERON:0005564;1.02e-11;10!UBERON:0001041;1.38e-08;30 | ||
|ontology_enrichment_disease=DOID:162!4.93e-23!235;DOID:14566!2.57e-22!239;DOID:0050687!5.89e-17!143;DOID:3095!2.24e-13!22;DOID:2994!2.24e-13!22;DOID:305!3.93e-12!106;DOID:0050686!8.73e-10!137;DOID:7!7.00e-08!39;DOID:200!7.96e-08!2;DOID:4305!7.96e-08!2;DOID:1036!1.48e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;2.30e-10;8!DOID:200;2.40e-10;2!DOID:4305;2.40e-10;2!DOID:3095;6.43e-10;22!DOID:2994;6.43e-10;22!DOID:201;2.01e-07;6!DOID:0060100;2.01e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.90e-23,235;DOID:14566,2.99e-22,239;DOID:0050687,3.12e-16,143;DOID:305,3.43e-13,106;DOID:1036,2.33e-10,8;DOID:200,2.40e-10,2;DOID:4305,2.40e-10,2;DOID:3095,6.39e-10,22;DOID:2994,6.39e-10,22;DOID:0050686,4.09e-09,137;DOID:201,2.15e-07,6;DOID:0060100,2.15e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000473!7.27e-15!8;UBERON:0003135!1.29e-10!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.04e-14;8!UBERON:0003135;1.25e-10;11!UBERON:0002423;3.27e-08;25!UBERON:0002107;3.67e-08;19!UBERON:0006925;3.67e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.01e-14,8;UBERON:0003135,1.23e-10,11;UBERON:0009497,3.23e-08,25;UBERON:0000015,3.23e-08,25;UBERON:0002423,3.23e-08,25;UBERON:0006235,3.23e-08,25;UBERON:0004161,3.23e-08,25;UBERON:0002107,3.60e-08,19;UBERON:0006925,3.60e-08,19;UBERON:0008836,3.60e-08,19;UBERON:0008835,5.63e-07,22;UBERON:0003894,5.63e-07,22 | |||
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| ||
|short_description=p1@ENST00000426413,p1@ENST00000431071 | |short_description=p1@ENST00000426413,p1@ENST00000431071 | ||
}} | }} |
Latest revision as of 05:24, 31 July 2015
Short description: | p1@ENST00000426413, p1@ENST00000431071 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000426413_5end, CAGE_peak_1_at_ENST00000431071_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000426413, ENST00000431071_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.62e-17 | 7 |
germ cell | 4.62e-17 | 7 |
hepatocyte | 2.83e-13 | 12 |
bone matrix secreting cell | 2.40e-10 | 2 |
osteocyte | 2.40e-10 | 2 |
osteoclast | 2.40e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 1.01e-14 | 8 |
male reproductive organ | 1.23e-10 | 11 |
epithelium of foregut-midgut junction | 3.23e-08 | 25 |
anatomical boundary | 3.23e-08 | 25 |
hepatobiliary system | 3.23e-08 | 25 |
foregut-midgut junction | 3.23e-08 | 25 |
septum transversum | 3.23e-08 | 25 |
liver | 3.60e-08 | 19 |
digestive gland | 3.60e-08 | 19 |
liver bud | 3.60e-08 | 19 |
hepatic diverticulum | 5.63e-07 | 22 |
liver primordium | 5.63e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.90e-23 | 235 |
disease of cellular proliferation | 2.99e-22 | 239 |
cell type cancer | 3.12e-16 | 143 |
carcinoma | 3.43e-13 | 106 |
chronic leukemia | 2.33e-10 | 8 |
giant cell tumor | 2.40e-10 | 2 |
bone giant cell tumor | 2.40e-10 | 2 |
germ cell and embryonal cancer | 6.39e-10 | 22 |
germ cell cancer | 6.39e-10 | 22 |
organ system cancer | 4.09e-09 | 137 |
connective tissue cancer | 2.15e-07 | 6 |
musculoskeletal system cancer | 2.15e-07 | 6 |