FFCP PHASE1:Hg19::chr6:7562948..7562964,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:7562948..7562964,+
|short_description=p@chr6:7562948..7562964,+
|description=CAGE_peak_at_chr6:7562948..7562964,+
|association_with_transcript=NA
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:7562948..7562964,+ | |||
|coexpression_cluster_id=C324 | |||
|description=CAGE_peak_at_chr6:7562948..7562964,+ | |||
|id=chr6:7562948..7562964,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.11e-25!254;CL:0000223!2.83e-12!59;CL:0002076!1.79e-09!43;CL:0002077!5.56e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0002327;7.43e-09;4!CL:0000622;1.82e-07;5!CL:0000349;3.77e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,6.44e-09,4;CL:0000622,1.14e-07,5;CL:0002076,2.43e-07,42;CL:0002077,2.54e-07,34;CL:0000349,3.77e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.95e-19!106;DOID:0050687!5.98e-14!143;DOID:162!3.83e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.35e-12!169;UBERON:0000925!1.35e-12!169;UBERON:0006595!1.35e-12!169;UBERON:0001007!7.07e-09!155;UBERON:0001555!7.07e-09!155;UBERON:0007026!7.07e-09!155;UBERON:0000077!2.55e-08!130;UBERON:0004921!4.81e-08!129;UBERON:0004185!4.81e-08!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;7.43e-09;4!UBERON:0005631;9.64e-07;10!UBERON:0000158;9.64e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,6.44e-09,4;UBERON:0005333,6.44e-09,4;UBERON:0008425,6.44e-09,4;UBERON:0005311,6.44e-09,4 | |||
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| ||
|short_description=p@chr6:7562948..7562964,+ | |||
}} | }} |
Latest revision as of 03:09, 31 July 2015
Short description: | p@chr6:7562948..7562964, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:7562948..7562964, + |
Coexpression cluster: | C324_tongue_salivary_oral_Prostate_amniotic_chorionic_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 6.44e-09 | 4 |
acinar cell | 1.14e-07 | 5 |
endo-epithelial cell | 2.43e-07 | 42 |
ecto-epithelial cell | 2.54e-07 | 34 |
extraembryonic cell | 3.77e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 6.44e-09 | 4 |
mammary bud | 6.44e-09 | 4 |
mammary ridge | 6.44e-09 | 4 |
mammary placode | 6.44e-09 | 4 |