FFCP PHASE1:Hg19::chr6:7543647..7543651,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:7543647..7543651,+ to FFCP PHASE1:Hg19::chr6:7543647..7543651,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:7543647..7543651,+ | |||
|coexpression_cluster_id=C3850 | |||
|description=CAGE_peak_at_chr6:7543647..7543651,+ | |||
|id=chr6:7543647..7543651,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.44e-19!254;CL:0000223!3.08e-16!59;CL:0002251!9.61e-15!21;CL:0002076!2.26e-14!43;CL:0000622!7.76e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000622;5.35e-16;5!CL:0000154;2.36e-13;6!CL:0002535;5.72e-11;2!CL:0000317;1.94e-10;2!CL:1000448;1.94e-10;2!CL:0002308;1.94e-10;2!CL:0002140;1.94e-10;2!CL:0000150;6.28e-09;9!CL:0002251;3.51e-08;20!CL:0002623;8.77e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,3.66e-16,5;CL:0000154,1.73e-13,6;CL:0002535,8.96e-11,2;CL:0000317,1.14e-10,2;CL:1000448,1.14e-10,2;CL:0002308,1.14e-10,2;CL:0002140,1.14e-10,2;CL:0000150,5.12e-09,9;CL:0002251,3.48e-08,20;CL:0002623,9.10e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.63e-18!106;DOID:0050687!9.39e-13!143;DOID:1749!3.63e-10!14;DOID:299!2.29e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:4362;1.25e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,1.78e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.96e-09!169;UBERON:0000925!7.96e-09!169;UBERON:0006595!7.96e-09!169;UBERON:0000344!1.47e-08!12;UBERON:0001007!7.90e-07!155;UBERON:0001555!7.90e-07!155;UBERON:0007026!7.90e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;5.72e-11;2!UBERON:0004801;5.72e-11;2!UBERON:0002419;1.94e-10;2!UBERON:0007771;1.94e-10;2!UBERON:0003297;1.94e-10;2!UBERON:0001821;1.94e-10;2!UBERON:0003487;1.94e-10;2!UBERON:0001820;1.94e-10;2!UBERON:0001041;1.61e-08;14!UBERON:0000002;4.31e-08;6!UBERON:0001560;4.31e-08;6!UBERON:0000974;1.23e-07;6!UBERON:0001043;3.10e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,8.96e-11,2;UBERON:0004801,8.96e-11,2;UBERON:0002419,1.14e-10,2;UBERON:0007771,1.14e-10,2;UBERON:0003297,1.14e-10,2;UBERON:0001821,1.14e-10,2;UBERON:0003487,1.14e-10,2;UBERON:0001820,1.14e-10,2;UBERON:0005089,1.14e-10,2;UBERON:0005088,1.14e-10,2;UBERON:0000002,5.77e-08,6;UBERON:0001560,5.77e-08,6;UBERON:0000166,2.02e-07,22;UBERON:0001043,2.19e-07,3;UBERON:0009143,2.19e-07,3 | |||
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| ||
|short_description=p@chr6:7543647..7543651,+ | |||
}} | }} |
Latest revision as of 03:09, 31 July 2015
Short description: | p@chr6:7543647..7543651, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:7543647..7543651, + |
Coexpression cluster: | C3850_immature_epidermoid_esophagus_amniotic_oral_Small_glassy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 3.66e-16 | 5 |
protein secreting cell | 1.73e-13 | 6 |
epithelial cell of cervix | 8.96e-11 | 2 |
sebum secreting cell | 1.14e-10 | 2 |
epithelial cell of sweat gland | 1.14e-10 | 2 |
epithelial cell of skin gland | 1.14e-10 | 2 |
acinar cell of sebaceous gland | 1.14e-10 | 2 |
glandular epithelial cell | 5.12e-09 | 9 |
epithelial cell of alimentary canal | 3.48e-08 | 20 |
acinar cell of salivary gland | 9.10e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 8.96e-11 | 2 |
cervix epithelium | 8.96e-11 | 2 |
skin gland | 1.14e-10 | 2 |
epidermis gland | 1.14e-10 | 2 |
gland of integumental system | 1.14e-10 | 2 |
sebaceous gland | 1.14e-10 | 2 |
skin sebaceous gland | 1.14e-10 | 2 |
sweat gland | 1.14e-10 | 2 |
sweat gland placode | 1.14e-10 | 2 |
sebaceous gland placode | 1.14e-10 | 2 |
uterine cervix | 5.77e-08 | 6 |
neck of organ | 5.77e-08 | 6 |
oral opening | 2.02e-07 | 22 |
esophagus | 2.19e-07 | 3 |
esophageal region | 2.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.78e-09 | 5 |