FFCP PHASE1:Hg19::chr6:64284469..64284490,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:64284469..64284490,+ | |||
|coexpression_cluster_id=C831 | |coexpression_cluster_id=C831 | ||
|description=CAGE_peak_at_chr6:64284469..64284490,+ | |description=CAGE_peak_at_chr6:64284469..64284490,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000066!4.58e-10!254 | |ontology_enrichment_celltype=CL:0000066!4.58e-10!254 | ||
|ontology_enrichment_celltype_v019=CL:0000313;1.27e-10;1 | |ontology_enrichment_celltype_v019=CL:0000313;1.27e-10;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.77e-10,1;CL:0000066,1.97e-09,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.48e-31;29!UBERON:0006595;1.99e-07;86 | |ontology_enrichment_development_v019=UBERON:0008947;1.48e-31;29!UBERON:0006595;1.99e-07;86 | ||
|ontology_enrichment_disease=DOID:305!7.50e-25!106;DOID:0050687!3.76e-22!143;DOID:162!1.94e-19!235;DOID:14566!1.32e-18!239;DOID:7!6.93e-07!39 | |ontology_enrichment_disease=DOID:305!7.50e-25!106;DOID:0050687!3.76e-22!143;DOID:162!1.94e-19!235;DOID:14566!1.32e-18!239;DOID:7!6.93e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:2152;1.27e-10;1 | |ontology_enrichment_disease_v019=DOID:2152;1.27e-10;1 | ||
|ontology_enrichment_disease_v019_2=DOID:305,2.30e-23,106;DOID:0050687,1.22e-16,143;DOID:162,8.72e-12,235;DOID:14566,1.76e-11,239;DOID:2152,1.77e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.44e-17!9;UBERON:0008947!1.88e-13!38;UBERON:0003258!1.88e-13!38;UBERON:0001041!1.36e-11!98;UBERON:0000065!5.03e-11!53;UBERON:0004921!4.14e-09!129;UBERON:0004185!4.14e-09!129;UBERON:0001004!5.15e-09!72;UBERON:0000072!8.87e-09!46;UBERON:0001557!3.22e-08!19;UBERON:0001007!4.19e-08!155;UBERON:0001555!4.19e-08!155;UBERON:0007026!4.19e-08!155;UBERON:0000077!1.10e-07!130;UBERON:0004119!1.23e-07!169;UBERON:0000925!1.23e-07!169;UBERON:0006595!1.23e-07!169;UBERON:0007499!3.93e-07!25;UBERON:0008835!4.29e-07!22;UBERON:0003894!4.29e-07!22;UBERON:0009497!5.67e-07!25;UBERON:0000015!5.67e-07!25;UBERON:0002423!5.67e-07!25;UBERON:0006235!5.67e-07!25;UBERON:0004161!5.67e-07!25;UBERON:0009856!9.51e-07!26 | |ontology_enrichment_uberon=UBERON:0001737!3.44e-17!9;UBERON:0008947!1.88e-13!38;UBERON:0003258!1.88e-13!38;UBERON:0001041!1.36e-11!98;UBERON:0000065!5.03e-11!53;UBERON:0004921!4.14e-09!129;UBERON:0004185!4.14e-09!129;UBERON:0001004!5.15e-09!72;UBERON:0000072!8.87e-09!46;UBERON:0001557!3.22e-08!19;UBERON:0001007!4.19e-08!155;UBERON:0001555!4.19e-08!155;UBERON:0007026!4.19e-08!155;UBERON:0000077!1.10e-07!130;UBERON:0004119!1.23e-07!169;UBERON:0000925!1.23e-07!169;UBERON:0006595!1.23e-07!169;UBERON:0007499!3.93e-07!25;UBERON:0008835!4.29e-07!22;UBERON:0003894!4.29e-07!22;UBERON:0009497!5.67e-07!25;UBERON:0000015!5.67e-07!25;UBERON:0002423!5.67e-07!25;UBERON:0006235!5.67e-07!25;UBERON:0004161!5.67e-07!25;UBERON:0009856!9.51e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.03e-85;9!UBERON:0001557;5.03e-85;9!UBERON:0000072;5.76e-22;37!UBERON:0000065;5.54e-18;44!UBERON:0004911;1.27e-10;1!UBERON:0001004;1.40e-09;65 | |ontology_enrichment_uberon_v019=UBERON:0001737;5.03e-85;9!UBERON:0001557;5.03e-85;9!UBERON:0000072;5.76e-22;37!UBERON:0000065;5.54e-18;44!UBERON:0004911;1.27e-10;1!UBERON:0001004;1.40e-09;65 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.04e-85,9;UBERON:0001557,9.68e-40,19;UBERON:0008947,8.54e-24,38;UBERON:0003258,8.54e-24,38;UBERON:0000072,5.73e-19,47;UBERON:0001041,1.67e-16,87;UBERON:0000065,2.53e-16,54;UBERON:0004921,1.72e-13,118;UBERON:0001004,1.62e-11,74;UBERON:0001007,1.42e-10,145;UBERON:0001555,1.42e-10,145;UBERON:0007026,1.42e-10,145;UBERON:0004911,1.77e-10,1;UBERON:0001048,2.02e-09,160;UBERON:0004119,2.25e-09,160;UBERON:0000925,2.25e-09,160;UBERON:0006595,2.25e-09,160 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.236132343941038,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,4.73227200159376,4.38320194203064,3.13314338848527,3.08823123650703,5.01122721412534,4.03360052488864,4.44943316928543,4.31687223275761,3.8474715694639,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0.784306353074702,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0.478278818186467,0,0.191505370132367,0,0,0.280797178113459,0,0,0,0,0.1605880751037,0,0,0,0,0.223676107892416,0,0,0,0,1.35227839237992,0,0,0,0,0,0.111443384277478,0,0,0.890894042497916,0,0,0,0,0,0,0,0,0.251932747854276,0,0.369254416383208,0,0,7.8769316857268,0,0,0,0,0,0,0,0.7812832832557,0.174919999992391,0,0,0.254253650292766,0.472775363535873,0,0,0,0,0.120596438625408,0,0,0,0,6.31843088410143,0,0,0.113942055847001,0,0,0.217294743844016,0,0,0.533034776018635,0,0,0,0,0,0,0,0.794682894901893,0,0,0,0,0.995261931078505,0,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0,0,1.05226393590145,0.207376382794494,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,1.25783230675811,1.60796497589608,0.903270027585302,0,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0,0.288180834308212,0,0,0.864328787928898,0.49701014226173,24.0407915309131,0.135904206073614,0.418411385249333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.472699093843342,0.329663433524666,0.471824806979294,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,0.105600336519406,0.35857467866569,0.191915197319445,0,0,0,0,0,0,0,0.656740165994712,0.170388021785422,0,0.58620893471233,0,0,0,1.88195521672762,0,0,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0.260994291965212,0.226705925512272,0,0,0,0,0,0,0,0.337884881306145,0.256241518587947,0.345430341731199,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0.235939446695481,0,0.115525666150338,0,0,0.198916222116275,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,2.83665218121524,0,0,0,0,0,0.215927591218621,0.47775168788705,0.0714765441766563,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,1.00669888618013,0,0,0,0.102662806856247,0,0,0,0,0,0.22589216407792,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0.399764623699716,0.178553938605658,0,0.561689566824178,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0.801652215796681,0,0,0.227336094654718,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.236132343941038,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,4.73227200159376,4.38320194203064,3.13314338848527,3.08823123650703,5.01122721412534,4.03360052488864,4.44943316928543,4.31687223275761,3.8474715694639,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0.784306353074702,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0.478278818186467,0,0.191505370132367,0,0,0.280797178113459,0,0,0,0,0.1605880751037,0,0,0,0,0.223676107892416,0,0,0,0,1.35227839237992,0,0,0,0,0,0.111443384277478,0,0,0.890894042497916,0,0,0,0,0,0,0,0,0.251932747854276,0,0.369254416383208,0,0,7.8769316857268,0,0,0,0,0,0,0,0.7812832832557,0.174919999992391,0,0,0.254253650292766,0.472775363535873,0,0,0,0,0.120596438625408,0,0,0,0,6.31843088410143,0,0,0.113942055847001,0,0,0.217294743844016,0,0,0.533034776018635,0,0,0,0,0,0,0,0.794682894901893,0,0,0,0,0.995261931078505,0,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0,0,1.05226393590145,0.207376382794494,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,1.25783230675811,1.60796497589608,0.903270027585302,0,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0,0.288180834308212,0,0,0.864328787928898,0.49701014226173,24.0407915309131,0.135904206073614,0.418411385249333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.472699093843342,0.329663433524666,0.471824806979294,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,0.105600336519406,0.35857467866569,0.191915197319445,0,0,0,0,0,0,0,0.656740165994712,0.170388021785422,0,0.58620893471233,0,0,0,1.88195521672762,0,0,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0.260994291965212,0.226705925512272,0,0,0,0,0,0,0,0.337884881306145,0.256241518587947,0.345430341731199,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0.235939446695481,0,0.115525666150338,0,0,0.198916222116275,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,2.83665218121524,0,0,0,0,0,0.215927591218621,0.47775168788705,0.0714765441766563,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,1.00669888618013,0,0,0,0.102662806856247,0,0,0,0,0,0.22589216407792,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0.399764623699716,0.178553938605658,0,0.561689566824178,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0.801652215796681,0,0,0.227336094654718,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr6:64284469..64284490,+ | |short_description=p@chr6:64284469..64284490,+ | ||
}} | }} |
Latest revision as of 02:42, 31 July 2015
Short description: | p@chr6:64284469..64284490, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:64284469..64284490, + |
Coexpression cluster: | C831_glassy_bile_Hep2_cervical_prostate_lung_epitheloid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.77e-10 | 1 |
epithelial cell | 1.97e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.04e-85 | 9 |
upper respiratory tract | 9.68e-40 | 19 |
respiratory primordium | 8.54e-24 | 38 |
endoderm of foregut | 8.54e-24 | 38 |
segment of respiratory tract | 5.73e-19 | 47 |
foregut | 1.67e-16 | 87 |
respiratory tract | 2.53e-16 | 54 |
subdivision of digestive tract | 1.72e-13 | 118 |
respiratory system | 1.62e-11 | 74 |
digestive system | 1.42e-10 | 145 |
digestive tract | 1.42e-10 | 145 |
primitive gut | 1.42e-10 | 145 |
epithelium of female gonad | 1.77e-10 | 1 |
primordium | 2.02e-09 | 160 |
endoderm-derived structure | 2.25e-09 | 160 |
endoderm | 2.25e-09 | 160 |
presumptive endoderm | 2.25e-09 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.30e-23 | 106 |
cell type cancer | 1.22e-16 | 143 |
cancer | 8.72e-12 | 235 |
disease of cellular proliferation | 1.76e-11 | 239 |
ovary epithelial cancer | 1.77e-10 | 1 |