FFCP PHASE1:Hg19::chr6:56485473..56485485,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:56485473..56485485,- | |||
|coexpression_cluster_id=C457 | |||
|description=CAGE_peak_at_chr6:56485473..56485485,- | |description=CAGE_peak_at_chr6:56485473..56485485,- | ||
|id=chr6:56485473..56485485,- | |id=chr6:56485473..56485485,- | ||
|ontology_enrichment_celltype=CL:0000223!1.86e-15!59;CL:0002076!1.89e-15!43;CL:0000066!2.38e-12!254;CL:0002251!4.26e-11!21 | |ontology_enrichment_celltype=CL:0000223!1.86e-15!59;CL:0002076!1.89e-15!43;CL:0000066!2.38e-12!254;CL:0002251!4.26e-11!21 | ||
|ontology_enrichment_celltype_v019=CL:0002076;5.47e-23;42!CL:0000622;1.30e-21;5!CL:0002623;4.95e-21;3!CL:0002251;4.74e-20;20!CL:0000154;4.79e-18;6!CL:0000240;1.27e-17;6!CL:0000311;1.27e-17;6!CL:0000079;1.27e-17;6!CL:0000237;1.27e-17;6!CL:0002159;6.37e-16;14!CL:0000312;3.47e-12;5!CL:0000150;4.38e-12;9!CL:0000362;1.30e-11;9!CL:0002231;5.36e-10;3!CL:0002166;2.11e-09;3!CL:0002368;3.16e-08;13!CL:0002336;3.93e-08;1!CL:0002261;3.93e-08;1!CL:0002170;3.93e-08;1!CL:0002077;1.78e-07;34!CL:0002327;2.00e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.70e-28,42;CL:0000223,1.27e-22,58;CL:0000622,1.27e-21,5;CL:0002623,4.35e-21,3;CL:0002251,5.99e-20,20;CL:0000154,4.71e-18,6;CL:0000240,1.58e-17,6;CL:0000311,1.58e-17,6;CL:0000079,1.58e-17,6;CL:0000237,1.58e-17,6;CL:0000036,1.58e-17,6;CL:0000357,1.58e-17,6;CL:0000114,1.58e-17,6;CL:0002159,9.04e-16,14;CL:0000066,7.10e-14,253;CL:0000312,4.30e-12,5;CL:0000150,4.33e-12,9;CL:0000362,1.58e-11,9;CL:0002231,5.99e-10,3;CL:0002166,2.73e-09,3;CL:0002368,2.24e-08,13;CL:0002077,2.50e-08,34;CL:0002321,3.65e-08,250;CL:0002336,3.80e-08,1;CL:0002261,3.80e-08,1;CL:0002170,3.80e-08,1;CL:0002327,1.76e-07,4;CL:0000076,7.00e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000357;1.27e-17;6!CL:0000114;1.27e-17;6!UBERON:0008814;1.19e-13;2!UBERON:0010056;1.19e-13;2!CL:0000223;2.26e-11;58 | |||
|ontology_enrichment_disease=DOID:1749!4.53e-12!14;DOID:305!1.99e-08!106;DOID:0050687!8.47e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.40e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.29e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001004!3.86e-14!72;UBERON:0000166!4.80e-12!21;UBERON:0004119!7.42e-11!169;UBERON:0000925!7.42e-11!169;UBERON:0006595!7.42e-11!169;UBERON:0000161!1.22e-09!35;UBERON:0000165!2.33e-09!28;UBERON:0000930!2.33e-09!28;UBERON:0001007!2.08e-08!155;UBERON:0001555!2.08e-08!155;UBERON:0007026!2.08e-08!155;UBERON:0003729!1.30e-07!5;UBERON:0001041!1.38e-07!98;UBERON:0000065!4.46e-07!53;UBERON:0000077!8.82e-07!130;UBERON:0000033!9.09e-07!123 | |ontology_enrichment_uberon=UBERON:0001004!3.86e-14!72;UBERON:0000166!4.80e-12!21;UBERON:0004119!7.42e-11!169;UBERON:0000925!7.42e-11!169;UBERON:0006595!7.42e-11!169;UBERON:0000161!1.22e-09!35;UBERON:0000165!2.33e-09!28;UBERON:0000930!2.33e-09!28;UBERON:0001007!2.08e-08!155;UBERON:0001555!2.08e-08!155;UBERON:0007026!2.08e-08!155;UBERON:0003729!1.30e-07!5;UBERON:0001041!1.38e-07!98;UBERON:0000065!4.46e-07!53;UBERON:0000077!8.82e-07!130;UBERON:0000033!9.09e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0000165;5.42e-14;28!UBERON:0000161;4.11e-12;19!UBERON:0000166;4.11e-12;19!UBERON:0001044;8.85e-11;6!UBERON:0003293;8.85e-11;6!UBERON:0003294;8.85e-11;6!UBERON:0010047;8.85e-11;6!UBERON:0003408;8.85e-11;6!UBERON:0000167;8.85e-11;6!UBERON:0002365;1.03e-09;31!UBERON:0002330;1.03e-09;31!UBERON:0001723;2.11e-09;3!UBERON:0001033;2.11e-09;3!UBERON:0003729;2.73e-08;13!UBERON:0003343;1.47e-07;4!UBERON:0004785;1.47e-07;4!UBERON:0001911;2.00e-07;4!UBERON:0001708;2.93e-07;4!UBERON:0008895;2.93e-07;4!UBERON:0001003;5.16e-07;15!UBERON:0007376;5.16e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,7.12e-14,22;UBERON:0003102,1.43e-13,99;UBERON:0000165,1.84e-13,29;UBERON:0000930,1.84e-13,29;UBERON:0000161,1.91e-13,36;UBERON:0001044,8.30e-11,6;UBERON:0003293,8.30e-11,6;UBERON:0003294,8.30e-11,6;UBERON:0010047,8.30e-11,6;UBERON:0000167,8.30e-11,6;UBERON:0000033,6.12e-10,56;UBERON:0002365,1.19e-09,31;UBERON:0002330,1.19e-09,31;UBERON:0001723,2.62e-09,3;UBERON:0001033,2.62e-09,3;UBERON:0010056,2.62e-09,3;UBERON:0000153,8.19e-09,62;UBERON:0007811,8.19e-09,62;UBERON:0001004,8.65e-09,74;UBERON:0004119,2.15e-08,160;UBERON:0000925,2.15e-08,160;UBERON:0006595,2.15e-08,160;UBERON:0003729,2.87e-08,13;UBERON:0002530,1.13e-07,59;UBERON:0003343,1.70e-07,4;UBERON:0004785,1.70e-07,4;UBERON:0001444,1.71e-07,49;UBERON:0001911,1.76e-07,4;UBERON:0005333,1.76e-07,4;UBERON:0008425,1.76e-07,4;UBERON:0005311,1.76e-07,4;UBERON:0001708,3.55e-07,4;UBERON:0008895,3.55e-07,4;UBERON:0001003,5.78e-07,15;UBERON:0007376,5.78e-07,15;UBERON:0007383,5.78e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0,0,0.600182192168805,0,0.257640540045629,0.18611685633159,0.337552664482532,0,0,0,0,0,0,0,0.773043412653187,1.63647672354501,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,2.53510069643662,0,0.590789906681404,0,0,0,1.64625428112938,1.1240175325762,2.41269533787914,3.98130314181677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17587489739202,1.27597587518148,2.50763863567975,1.74380363108377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,2.00506470303285,7.18231713699991,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,1.30012049207304,0,0,0.154048617114644,0,0,0.107420244868274,0.290033387828457,0.0852266274161009,0,2.80984356113663,1.92190067365106,1.91419068741876,4.34978457678865,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,0,0,3.44585100310439,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0.0711418433484141,0.159426272728822,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0.140669416410513,0,0,0,0,0,0,0.20453736500431,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,1.70690172428249,0.508507300585533,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0,0,0,0.83654246567162,0,0,0,0.0897576444097721,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0.485560759068186,0,0,0,0,0,0,0,0,0,0,0,0.693373365065693,0,0.0979923974143777,0.261177619741208,0,0.171986032471617,0.0967563312890851,0,0,0.0969890164884194,0,0.451961481561065,0.137041924646751,0,0,0.195551382734803,0,0,0,0.288180834308212,0.114536596165916,0,0.14405479798815,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.272406812223151,0,0,0.415440338029185,0,0,0,0.335434687599266,0,0,0.105600336519406,0.537862017998534,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.471162288750703,0,0,0.1251909307065,0,0.221858103073705,0.0620964029413835,0.830091809617385,0.249960815924213,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0,0,0,0,0,0,1.04349012362347,0,1.14241563650639,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0.179088841081487,0,0,0,0.38582807654183,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0.211312123358627,0,0,0,0,0,0.559518030877778,1.86623178009892,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.490738592505128,0.11796972334774,11.5560017068658,1.15525666150338,0,0,0.198916222116275,0,0,0,0,0.163771917510097,0,0.0675375846183947,1.56215619722769,0,0,0.546974809018219,0,0.496211178389294,0,1.02209942111676,0,0.336283722218824,0,0,0.0887023701626388,0,0.171488009437418,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0,0.47775168788705,0,0,0.23248285073625,0,0,4.35153944742377,8.02376842341565,2.76503864725637,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0.397901550322736,0,0,0.659643100472575,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0.199882311849858,1.78553938605658,0.705789743431384,0,0,0.458729283404541,0,0.157771562193185,0,0,0,0.371995018166751,0,0,0.126166424835079,0.109265571963696,0,0,0,0,0,0,0,0.829169439458779,0.20686599172379,0,0,0,0.0620747142958579,0,0,0,1.30630048738177,0.342233301085281,0,0.0717222053926763,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0.406896178315738,0,0,0 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| ||
|short_description=p@chr6:56485473..56485485,- | |short_description=p@chr6:56485473..56485485,- | ||
}} | }} |
Latest revision as of 02:30, 31 July 2015
Short description: | p@chr6:56485473..56485485, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:56485473..56485485, - |
Coexpression cluster: | C457_salivary_Prostate_oral_Small_Keratinocyte_Urothelial_Mammary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.70e-28 | 42 |
endodermal cell | 1.27e-22 | 58 |
acinar cell | 1.27e-21 | 5 |
acinar cell of salivary gland | 4.35e-21 | 3 |
epithelial cell of alimentary canal | 5.99e-20 | 20 |
protein secreting cell | 4.71e-18 | 6 |
stratified squamous epithelial cell | 1.58e-17 | 6 |
keratin accumulating cell | 1.58e-17 | 6 |
stratified epithelial cell | 1.58e-17 | 6 |
keratinizing barrier epithelial cell | 1.58e-17 | 6 |
epithelial fate stem cell | 1.58e-17 | 6 |
stratified epithelial stem cell | 1.58e-17 | 6 |
surface ectodermal cell | 1.58e-17 | 6 |
general ecto-epithelial cell | 9.04e-16 | 14 |
epithelial cell | 7.10e-14 | 253 |
keratinocyte | 4.30e-12 | 5 |
glandular epithelial cell | 4.33e-12 | 9 |
epidermal cell | 1.58e-11 | 9 |
epithelial cell of prostate | 5.99e-10 | 3 |
epithelial cell of Malassez | 2.73e-09 | 3 |
respiratory epithelial cell | 2.24e-08 | 13 |
ecto-epithelial cell | 2.50e-08 | 34 |
embryonic cell | 3.65e-08 | 250 |
buccal mucosa cell | 3.80e-08 | 1 |
endothelial cell of viscerocranial mucosa | 3.80e-08 | 1 |
keratinized cell of the oral mucosa | 3.80e-08 | 1 |
mammary gland epithelial cell | 1.76e-07 | 4 |
squamous epithelial cell | 7.00e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
oral opening | 7.12e-14 | 22 |
surface structure | 1.43e-13 | 99 |
mouth | 1.84e-13 | 29 |
stomodeum | 1.84e-13 | 29 |
orifice | 1.91e-13 | 36 |
saliva-secreting gland | 8.30e-11 | 6 |
gland of oral region | 8.30e-11 | 6 |
gland of foregut | 8.30e-11 | 6 |
oral gland | 8.30e-11 | 6 |
oral cavity | 8.30e-11 | 6 |
head | 6.12e-10 | 56 |
exocrine gland | 1.19e-09 | 31 |
exocrine system | 1.19e-09 | 31 |
tongue | 2.62e-09 | 3 |
gustatory system | 2.62e-09 | 3 |
future tongue | 2.62e-09 | 3 |
anterior region of body | 8.19e-09 | 62 |
craniocervical region | 8.19e-09 | 62 |
respiratory system | 8.65e-09 | 74 |
endoderm-derived structure | 2.15e-08 | 160 |
endoderm | 2.15e-08 | 160 |
presumptive endoderm | 2.15e-08 | 160 |
mouth mucosa | 2.87e-08 | 13 |
gland | 1.13e-07 | 59 |
mucosa of oral region | 1.70e-07 | 4 |
respiratory system mucosa | 1.70e-07 | 4 |
subdivision of head | 1.71e-07 | 49 |
mammary gland | 1.76e-07 | 4 |
mammary bud | 1.76e-07 | 4 |
mammary ridge | 1.76e-07 | 4 |
mammary placode | 1.76e-07 | 4 |
jaw skeleton | 3.55e-07 | 4 |
splanchnocranium | 3.55e-07 | 4 |
skin epidermis | 5.78e-07 | 15 |
outer epithelium | 5.78e-07 | 15 |
enveloping layer of ectoderm | 5.78e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.29e-07 | 14 |