FFCP PHASE1:Hg19::chr6:56480719..56480734,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:56480719..56480734,- | |||
|coexpression_cluster_id=C457 | |||
|description=CAGE_peak_at_chr6:56480719..56480734,- | |description=CAGE_peak_at_chr6:56480719..56480734,- | ||
|id=chr6:56480719..56480734,- | |id=chr6:56480719..56480734,- | ||
|ontology_enrichment_celltype=CL:0002076!7.04e-18!43;CL:0000223!1.00e-15!59;CL:0002251!8.32e-12!21;CL:0000066!3.78e-10!254;CL:0002368!9.01e-08!13;CL:0002623!7.17e-07!3 | |ontology_enrichment_celltype=CL:0002076!7.04e-18!43;CL:0000223!1.00e-15!59;CL:0002251!8.32e-12!21;CL:0000066!3.78e-10!254;CL:0002368!9.01e-08!13;CL:0002623!7.17e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002623;1.77e-46;3!CL:0000622;3.18e-28;5!CL:0000154;1.19e-23;6!CL:0002251;3.70e-19;20!CL:0002076;1.01e-17;42!CL:0002336;1.41e-16;1!CL:0002261;1.41e-16;1!CL:0002170;1.41e-16;1!CL:0002327;3.32e-16;4!CL:0000150;5.29e-16;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,1.21e-46,3;CL:0000622,2.53e-28,5;CL:0000154,9.87e-24,6;CL:0002076,1.05e-22,42;CL:0002251,2.58e-19,20;CL:0002336,6.47e-17,1;CL:0002261,6.47e-17,1;CL:0002170,6.47e-17,1;CL:0000223,2.73e-16,58;CL:0002327,3.07e-16,4;CL:0000150,4.66e-16,9;CL:0000066,4.34e-09,253 | |||
|ontology_enrichment_development_v019=CL:0000223;4.35e-09;58 | |||
|ontology_enrichment_disease=DOID:1749!4.39e-10!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003729!3.85e-09!5;UBERON:0001004!6.80e-09!72;UBERON:0000161!1.34e-07!35;UBERON:0003343!2.17e-07!4;UBERON:0004785!2.17e-07!4;UBERON:0000166!8.74e-07!21 | |ontology_enrichment_uberon=UBERON:0003729!3.85e-09!5;UBERON:0001004!6.80e-09!72;UBERON:0000161!1.34e-07!35;UBERON:0003343!2.17e-07!4;UBERON:0004785!2.17e-07!4;UBERON:0000166!8.74e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0001044;1.19e-23;6!UBERON:0003293;1.19e-23;6!UBERON:0003294;1.19e-23;6!UBERON:0010047;1.19e-23;6!UBERON:0003408;1.19e-23;6!UBERON:0000167;1.19e-23;6!UBERON:0001911;3.32e-16;4!UBERON:0000165;1.04e-13;28!UBERON:0000161;3.11e-13;19!UBERON:0000166;3.11e-13;19!UBERON:0002365;2.30e-12;31!UBERON:0002330;2.30e-12;31!UBERON:0001041;1.64e-10;14!UBERON:0002530;3.09e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,9.87e-24,6;UBERON:0003293,9.87e-24,6;UBERON:0003294,9.87e-24,6;UBERON:0010047,9.87e-24,6;UBERON:0000167,9.87e-24,6;UBERON:0001911,3.07e-16,4;UBERON:0005333,3.07e-16,4;UBERON:0008425,3.07e-16,4;UBERON:0005311,3.07e-16,4;UBERON:0003408,1.61e-14,10;UBERON:0000165,2.42e-13,29;UBERON:0000930,2.42e-13,29;UBERON:0002365,2.02e-12,31;UBERON:0002330,2.02e-12,31;UBERON:0000166,1.59e-11,22;UBERON:0000161,1.13e-10,36;UBERON:0001004,1.06e-09,74;UBERON:0002530,4.17e-09,59;UBERON:0000076,1.37e-08,8;UBERON:0004119,1.50e-08,160;UBERON:0000925,1.50e-08,160;UBERON:0006595,1.50e-08,160;UBERON:0001444,6.82e-08,49;UBERON:0000033,6.73e-07,56;UBERON:0005153,7.81e-07,37 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0.665188192387692,0.087834785693126,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.538168907066586,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0.966304265816484,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0,0.548751427043128,0,0.603173834469785,1.75918045801206,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0.16798212819886,0.425325291727159,1.43293636324557,1.45316969256981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0.802025881213139,1.10497186723076,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0.137836572484531,0,0.145016693914229,0,0,2.14870389969272,0.576570202095319,0.765676274967505,1.0115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0,0,0.921482106297696,0,0,0.111308705022906,0.16480387422676,0,0.19924798825107,0,0.251932747854276,0.102268682502155,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0.41827123283581,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0.248505071130865,0.471388069233591,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0.105600336519406,1.25501137532991,0.575745591958336,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0.110929051536852,0,0.138348634936231,0.124980407962107,0,0,0,0,0,0,0.233713309847224,0.554805861502613,0,0.251567901752575,0.889811221596536,0,0.151230923763239,0,0,0.159296767163702,0,0,0,0.265841714557995,0,0.150257608997218,0,0,0.181848659202559,0,0,0,0.400027764663154,0,0,0,0,0,0.260994291965212,0,0,0,0.358177682162975,0,0,0,0.192914038270915,0.168942440653073,0,0,0,0,0.194860308839388,0,0,0.327609848846413,0,0,0,0,0,0,0,1.53867458491389,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0.392590874004102,0.235939446695481,1.46742878817343,0.231051332300676,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0.638812138197976,0.535701835878287,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,1.65772931330429,2.0486217251274,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0.0771741581079447,0,0.470317296361523,0,0,0,0,0,0,0,0,0.0999411559249289,0.357107877211315,0.705789743431384,0.0802413666891683,0,0.458729283404541,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0.665188192387692,0.087834785693126,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.538168907066586,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0.966304265816484,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0,0.548751427043128,0,0.603173834469785,1.75918045801206,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0.16798212819886,0.425325291727159,1.43293636324557,1.45316969256981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0.802025881213139,1.10497186723076,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0.137836572484531,0,0.145016693914229,0,0,2.14870389969272,0.576570202095319,0.765676274967505,1.0115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0,0,0.921482106297696,0,0,0.111308705022906,0.16480387422676,0,0.19924798825107,0,0.251932747854276,0.102268682502155,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0.41827123283581,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0.248505071130865,0.471388069233591,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0.105600336519406,1.25501137532991,0.575745591958336,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0.110929051536852,0,0.138348634936231,0.124980407962107,0,0,0,0,0,0,0.233713309847224,0.554805861502613,0,0.251567901752575,0.889811221596536,0,0.151230923763239,0,0,0.159296767163702,0,0,0,0.265841714557995,0,0.150257608997218,0,0,0.181848659202559,0,0,0,0.400027764663154,0,0,0,0,0,0.260994291965212,0,0,0,0.358177682162975,0,0,0,0.192914038270915,0.168942440653073,0,0,0,0,0.194860308839388,0,0,0.327609848846413,0,0,0,0,0,0,0,1.53867458491389,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0.392590874004102,0.235939446695481,1.46742878817343,0.231051332300676,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0.638812138197976,0.535701835878287,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,1.65772931330429,2.0486217251274,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0.0771741581079447,0,0.470317296361523,0,0,0,0,0,0,0,0,0.0999411559249289,0.357107877211315,0.705789743431384,0.0802413666891683,0,0.458729283404541,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr6:56480719..56480734,- | |short_description=p@chr6:56480719..56480734,- | ||
}} | }} |
Latest revision as of 02:29, 31 July 2015
Short description: | p@chr6:56480719..56480734, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:56480719..56480734, - |
Coexpression cluster: | C457_salivary_Prostate_oral_Small_Keratinocyte_Urothelial_Mammary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 1.21e-46 | 3 |
acinar cell | 2.53e-28 | 5 |
protein secreting cell | 9.87e-24 | 6 |
endo-epithelial cell | 1.05e-22 | 42 |
epithelial cell of alimentary canal | 2.58e-19 | 20 |
buccal mucosa cell | 6.47e-17 | 1 |
endothelial cell of viscerocranial mucosa | 6.47e-17 | 1 |
keratinized cell of the oral mucosa | 6.47e-17 | 1 |
endodermal cell | 2.73e-16 | 58 |
mammary gland epithelial cell | 3.07e-16 | 4 |
glandular epithelial cell | 4.66e-16 | 9 |
epithelial cell | 4.34e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 9.87e-24 | 6 |
gland of oral region | 9.87e-24 | 6 |
gland of foregut | 9.87e-24 | 6 |
oral gland | 9.87e-24 | 6 |
oral cavity | 9.87e-24 | 6 |
mammary gland | 3.07e-16 | 4 |
mammary bud | 3.07e-16 | 4 |
mammary ridge | 3.07e-16 | 4 |
mammary placode | 3.07e-16 | 4 |
gland of gut | 1.61e-14 | 10 |
mouth | 2.42e-13 | 29 |
stomodeum | 2.42e-13 | 29 |
exocrine gland | 2.02e-12 | 31 |
exocrine system | 2.02e-12 | 31 |
oral opening | 1.59e-11 | 22 |
orifice | 1.13e-10 | 36 |
respiratory system | 1.06e-09 | 74 |
gland | 4.17e-09 | 59 |
external ectoderm | 1.37e-08 | 8 |
endoderm-derived structure | 1.50e-08 | 160 |
endoderm | 1.50e-08 | 160 |
presumptive endoderm | 1.50e-08 | 160 |
subdivision of head | 6.82e-08 | 49 |
head | 6.73e-07 | 56 |
epithelial bud | 7.81e-07 | 37 |