FFCP PHASE1:Hg19::chr6:3912225..3912249,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_BX647262_5end | |association_with_transcript=-12bp_to_BX647262_5end | ||
|cluster_id=chr6:3912225..3912249,- | |||
|coexpression_cluster_id=C4600 | |coexpression_cluster_id=C4600 | ||
|description=CAGE_peak_1_at_BX647262_5end | |description=CAGE_peak_1_at_BX647262_5end | ||
|id=chr6:3912225..3912249,- | |id=chr6:3912225..3912249,- | ||
|ontology_enrichment_celltype=CL:0002139!6.18e-17!24;CL:0000071!1.60e-12!18;CL:0002546!1.60e-12!18;CL:0000115!3.03e-12!35;CL:0002078!1.01e-11!44;CL:0000222!1.60e-11!119;CL:0000213!2.60e-11!57;CL:0000215!2.60e-11!57;CL:0000220!6.14e-08!246;CL:1000413!6.61e-08!9;CL:0000066!8.93e-08!254;CL:0002321!1.26e-07!248 | |ontology_enrichment_celltype=CL:0002139!6.18e-17!24;CL:0000071!1.60e-12!18;CL:0002546!1.60e-12!18;CL:0000115!3.03e-12!35;CL:0002078!1.01e-11!44;CL:0000222!1.60e-11!119;CL:0000213!2.60e-11!57;CL:0000215!2.60e-11!57;CL:0000220!6.14e-08!246;CL:1000413!6.61e-08!9;CL:0000066!8.93e-08!254;CL:0002321!1.26e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002139;6.70e-24;24!CL:0000115;3.50e-18;36!CL:0000071;5.44e-17;18!CL:1000413;1.40e-11;9!CL:0002078;2.61e-11;45!CL:0000213;8.33e-11;58!CL:0000215;8.33e-11;58!CL:0000349;2.92e-09;19!CL:0002138;1.43e-08;6!CL:0002544;2.49e-08;6!CL:0002543;5.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.05e-24,24;CL:0000115,7.04e-21,36;CL:0000213,2.32e-19,58;CL:0000215,2.32e-19,58;CL:0000071,2.01e-17,18;CL:0002546,2.01e-17,18;CL:0002078,3.67e-17,45;CL:1000413,1.13e-11,9;CL:0000222,1.37e-09,121;CL:0000349,4.11e-09,19;CL:0005020,1.21e-08,6;CL:0002138,1.21e-08,6;CL:0005022,1.21e-08,6;CL:0000076,1.60e-08,63;CL:0002544,2.08e-08,6;CL:0002543,2.93e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;5.44e-17;18!CL:0005022;1.43e-08;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.60e-22!118;UBERON:0004872!7.54e-15!84;UBERON:0000487!1.58e-14!22;UBERON:0004111!7.29e-14!241;UBERON:0000055!8.01e-13!69;UBERON:0001986!1.60e-12!18;UBERON:0004638!1.60e-12!18;UBERON:0004852!1.60e-12!18;UBERON:0000025!1.66e-12!194;UBERON:0006914!1.79e-12!25;UBERON:0000477!4.67e-12!286;UBERON:0001009!5.38e-12!113;UBERON:0000490!6.47e-12!138;UBERON:0002049!6.98e-12!79;UBERON:0007798!6.98e-12!79;UBERON:0004535!1.12e-10!110;UBERON:0000119!1.37e-10!312;UBERON:0001981!4.54e-10!60;UBERON:0007500!4.54e-10!60;UBERON:0004537!4.54e-10!60;UBERON:0006965!4.54e-10!60;UBERON:0000483!4.85e-10!309;UBERON:0000468!1.74e-08!659;UBERON:0005631!1.90e-08!14;UBERON:0000158!1.90e-08!14;UBERON:0003915!6.61e-08!9;UBERON:0004700!6.61e-08!9;UBERON:0001917!6.61e-08!9;UBERON:0000467!3.06e-07!625;UBERON:0000480!4.04e-07!626;UBERON:0007100!8.68e-07!27;UBERON:0000478!9.30e-07!24 | |ontology_enrichment_uberon=UBERON:0003914!2.60e-22!118;UBERON:0004872!7.54e-15!84;UBERON:0000487!1.58e-14!22;UBERON:0004111!7.29e-14!241;UBERON:0000055!8.01e-13!69;UBERON:0001986!1.60e-12!18;UBERON:0004638!1.60e-12!18;UBERON:0004852!1.60e-12!18;UBERON:0000025!1.66e-12!194;UBERON:0006914!1.79e-12!25;UBERON:0000477!4.67e-12!286;UBERON:0001009!5.38e-12!113;UBERON:0000490!6.47e-12!138;UBERON:0002049!6.98e-12!79;UBERON:0007798!6.98e-12!79;UBERON:0004535!1.12e-10!110;UBERON:0000119!1.37e-10!312;UBERON:0001981!4.54e-10!60;UBERON:0007500!4.54e-10!60;UBERON:0004537!4.54e-10!60;UBERON:0006965!4.54e-10!60;UBERON:0000483!4.85e-10!309;UBERON:0000468!1.74e-08!659;UBERON:0005631!1.90e-08!14;UBERON:0000158!1.90e-08!14;UBERON:0003915!6.61e-08!9;UBERON:0004700!6.61e-08!9;UBERON:0001917!6.61e-08!9;UBERON:0000467!3.06e-07!625;UBERON:0000480!4.04e-07!626;UBERON:0007100!8.68e-07!27;UBERON:0000478!9.30e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0000487;8.80e-19;22!UBERON:0004638;5.44e-17;18!UBERON:0001986;5.44e-17;18!UBERON:0004852;5.44e-17;18!UBERON:0006914;1.05e-15;25!UBERON:0000490;2.56e-13;33!UBERON:0003915;1.40e-11;9!UBERON:0004700;1.40e-11;9!UBERON:0001917;1.40e-11;9!UBERON:0007100;6.33e-10;25!UBERON:0005631;3.59e-09;10!UBERON:0000158;3.59e-09;10!UBERON:0000478;9.54e-09;24!UBERON:0003688;5.92e-08;6!UBERON:0002358;5.92e-08;6!UBERON:0003684;5.92e-08;6!UBERON:0001178;5.92e-08;6!UBERON:0001473;9.11e-08;8!UBERON:0004536;9.11e-08;8!UBERON:0006558;9.11e-08;8!UBERON:0000948;2.32e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,3.88e-19,117;UBERON:0000487,4.99e-19,22;UBERON:0004638,2.01e-17,18;UBERON:0001986,2.01e-17,18;UBERON:0004852,2.01e-17,18;UBERON:0006914,6.44e-16,25;UBERON:0001009,2.69e-13,112;UBERON:0004872,3.02e-13,83;UBERON:0003915,1.13e-11,9;UBERON:0004700,1.13e-11,9;UBERON:0001917,1.13e-11,9;UBERON:0004535,1.75e-11,109;UBERON:0000055,4.19e-11,68;UBERON:0007100,3.81e-10,27;UBERON:0002049,1.05e-09,78;UBERON:0007798,1.05e-09,78;UBERON:0005631,8.01e-09,14;UBERON:0000158,8.01e-09,14;UBERON:0000478,1.31e-08,24;UBERON:0001473,5.87e-08,8;UBERON:0004536,5.87e-08,8;UBERON:0006558,5.87e-08,8;UBERON:0003688,6.14e-08,6;UBERON:0002358,6.14e-08,6;UBERON:0003684,6.14e-08,6;UBERON:0001178,6.14e-08,6;UBERON:0000948,1.32e-07,24;UBERON:0005498,1.32e-07,24;UBERON:0004140,1.32e-07,24;UBERON:0009881,1.32e-07,24;UBERON:0004141,1.32e-07,24;UBERON:0003084,1.32e-07,24;UBERON:0007005,1.32e-07,24;UBERON:0004139,1.32e-07,24;UBERON:0004291,1.32e-07,24;UBERON:0004871,2.78e-07,8;UBERON:0007500,3.00e-07,59;UBERON:0001981,3.00e-07,59;UBERON:0004537,3.00e-07,59;UBERON:0006965,3.00e-07,59;UBERON:0000025,3.98e-07,192 | |||
|phase1_expression=5.4503513781167,4.71021152560163,3.52386010239928,6.00439790118782,4.02264984984559,14.8297549097063,2.53299878168311,2.52687949370732,0.261185628199839,5.16041266653169,3.48900583986214,9.17453762946723,0.527533956456907,0,0,0.672325146451775,0,0.730310090387373,0,0.246242116153576,0,0,0.286235987131057,0.684372125364421,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,1.02290049474824,0,0,0,0,0,0.661743720148475,1.33037638477538,1.05401742831751,0,0,0,0,0,0,0,0,0,21.8638648103376,8.60234595106124,16.6627440771645,11.8714667804042,19.2969740656557,3.57653454522088,3.55291443112578,10.8535038851118,10.6729878806013,9.70689777017544,2.81980521976403,0.760272105718513,1.46437234528902,4.04429388380456,1.62028389576352,1.69669483739752,1.79623498100936,1.46394924628319,9.19899824795299,12.3404535743857,7.69447324507711,0,0,0,17.8909902610315,1.77282716330412,1.45650098894541,2.0078563452417,0,3.92474320099615,3.20246987189115,4.9333509683432,1.55605517699883,1.61652806483626,1.79808093424805,0.454072282934794,0,0,0.312160076830321,1.71141546463335,0.149448680551801,0.939475989150119,0.161872944368132,0.140450806702248,0.816616685019573,0,0,0,0,1.82032272387605,0,0,0,0.831192346452549,0.438977620880838,0,0,1.47461838108027,2.15267562826634,3.63047560991565,2.11931901159562,0,0.412210116953756,0.772921620136887,0.930584281657949,0.168776332241266,0.389748020644795,1.26216887122057,0.368199594569197,0,0.710019185033229,0.806016785821122,0.67824236924195,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828147600278907,0,0.482022059766964,0.330881918197182,0.435758888184812,0.237270619111097,0.674156540800822,0,0.38474715694639,0,0,2.4694440679884,1.47008711385542,0,0,0,0,16.3574623262341,0,0,0,0,0,0,0,0,0.231860809950154,1.29149563659404,4.90845922387651,9.72269576410883,3.61482889245737,0,0,0,0,0,0,1.00789276919316,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,1.45770409648969,0.43596006883328,0.51336800074665,1.29271715757778,3.57656445851882,0,1.86156681609409,1.04007436911366,0,1.41849132023278,0,1.42977993658148,1.08524321078289,0,0.325736184293735,1.42156779497018,0,0,2.61460037580088,1.89948683245908,0,0,0,2.15662369942424,1.14861935834114,0,4.34343920002738,1.84928690295345,2.50685348535854,0,0,0,0,0.508189248444927,0,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,2.49565033836969,4.46072471992904,7.56971592162886,1.99140405487612,0.601892199455438,0,1.03473071292505,0.664225598535437,2.21243002250044,0,0.195801157462741,0.343143423810856,0,0,0,0.909382714338778,3.32870879020994,0.30239029332968,6.94701861892575,3.37616341233737,2.52594084989766,5.89440086576224,3.58195074346692,4.66476371316462,10.3892646511494,0.308419387605311,2.84098760501003,0.0821271560138091,0,0.348631135379878,2.05461064305758,0.200506470303285,0.0920809889358963,0,0.182091168006717,0.131124414959424,0.902399225814824,0.770153371044148,0,1.46139224653261,1.05551628892876,1.13733384070897,6.12337338995456,1.51141141271498,1.54227252690289,0.812839312631559,0,0.509752546090077,0.831076008928724,0.223874754722178,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,22.4957501781823,0,0.462145851343933,0.614014698904518,0.275673144969061,2.36324538710202,1.45016693914229,1.02271952899321,0.356128142586949,0,0.192190067365106,0.382838137483752,0,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0,0.37064843820784,1.00187420719394,0.372158369359667,0,0,0,0,0,0.78494864019923,0.359744915166629,0.274537029736055,0.117812402345686,0.808729926293264,0,0,0,0,1.05650146756755,0.409499734223957,0,0,1.10273068709225,0,0.876901770507525,0,0,0.811641507850816,0.6196469961995,0.281695602532241,0.143411352204052,0.0982490410131212,0.7133421029625,0,0,0.329294892959902,0,0,0,0,0,0,0,3.36942951335251,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0.852408440419239,10.7435018131961,2.07875276582847,11.0577852755724,0,0.844016498463076,0.222617410045812,0,0,3.18796781201712,0.276283915531148,0,1.94310496754094,0,3.11039587661807,0.449341755736634,0.537063524026827,0,0.295930216910801,0,1.11136990144637,0,0.185536196323703,0,0.7812832832557,0,0.724999575434793,0,1.01701460117107,0,0,0,0,0.885741385813839,0.60298219312704,0,0,0,0,0.10893846351899,0,0,2.16489906109302,0,0,0,13.7170498684725,1.92354946143911,29.3169126810249,0,0,0,0,0.392125068635479,0.335643173951685,0,0,0,0.816164040795739,0.141353071433941,0,0,1.14994833854341,0,0,0,0,0.134802265961354,0,0,0,0,0,0.789168805698781,1.20990716048664,0,0.063186579628488,0,0,0,0,0,1.19472429772959,0.853828638089378,0,0,0.0979923974143777,0.522355239482415,0.17472666824203,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0.137041924646751,0.19871461170299,0.0633107959558787,0.195551382734803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| ||
|short_description=p1@BX647262 | |short_description=p1@BX647262 | ||
}} | }} |
Latest revision as of 01:24, 31 July 2015
Short description: | p1@BX647262 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BX647262_5end |
Coexpression cluster: | C4600_heart_chorionic_Endothelial_Sertoli_Intestinal_Ewing_hepatic |
Association with transcript: | -12bp_to_BX647262_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.05e-24 | 24 |
endothelial cell | 7.04e-21 | 36 |
lining cell | 2.32e-19 | 58 |
barrier cell | 2.32e-19 | 58 |
blood vessel endothelial cell | 2.01e-17 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.01e-17 | 18 |
meso-epithelial cell | 3.67e-17 | 45 |
endothelial cell of artery | 1.13e-11 | 9 |
mesodermal cell | 1.37e-09 | 121 |
extraembryonic cell | 4.11e-09 | 19 |
lymphangioblast | 1.21e-08 | 6 |
endothelial cell of lymphatic vessel | 1.21e-08 | 6 |
vascular lymphangioblast | 1.21e-08 | 6 |
squamous epithelial cell | 1.60e-08 | 63 |
aortic endothelial cell | 2.08e-08 | 6 |
vein endothelial cell | 2.93e-07 | 6 |