FFCP PHASE1:Hg19::chr6:168335523..168335538,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:168335523..168335538,+ | |||
|coexpression_cluster_id=C1795 | |coexpression_cluster_id=C1795 | ||
|description=CAGE_peak_at_chr6:168335523..168335538,+ | |description=CAGE_peak_at_chr6:168335523..168335538,+ | ||
|id=chr6:168335523..168335538,+ | |id=chr6:168335523..168335538,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000313;6.03e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,6.03e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0005062;6.73e-17;4!UBERON:0007284;6.73e-17;4!UBERON:0004140;6.50e-09;1!UBERON:0010226;1.06e-08;1!UBERON:0010227;1.53e-08;1!UBERON:0006603;2.27e-08;65 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;1.08e-15;2!DOID:2152;6.03e-09;1!DOID:178;1.53e-08;1!DOID:326;1.53e-08;1!DOID:3978;1.53e-08;1!DOID:3394;1.53e-08;1!DOID:5844;1.53e-08;1!DOID:1287;2.75e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.66e-16,2;DOID:2152,6.03e-09,1;DOID:178,1.27e-08,1;DOID:326,1.27e-08,1;DOID:3978,1.27e-08,1;DOID:3394,1.27e-08,1;DOID:5844,1.27e-08,1;DOID:1287,2.47e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.55e-45!115;UBERON:0004151!9.23e-09!3;UBERON:0003978!1.10e-08!3;UBERON:0009751!1.10e-08!3;UBERON:0000946!1.10e-08!3;UBERON:0002523!1.10e-08!3;UBERON:0005983!1.10e-08!3;UBERON:0002165!1.10e-08!3;UBERON:0002062!1.10e-08!3;UBERON:0007280!1.10e-08!3;UBERON:0001042!9.87e-08!10;UBERON:0009145!9.87e-08!10;UBERON:0006562!5.84e-07!11 | |ontology_enrichment_uberon=UBERON:0007023!5.55e-45!115;UBERON:0004151!9.23e-09!3;UBERON:0003978!1.10e-08!3;UBERON:0009751!1.10e-08!3;UBERON:0000946!1.10e-08!3;UBERON:0002523!1.10e-08!3;UBERON:0005983!1.10e-08!3;UBERON:0002165!1.10e-08!3;UBERON:0002062!1.10e-08!3;UBERON:0007280!1.10e-08!3;UBERON:0001042!9.87e-08!10;UBERON:0009145!9.87e-08!10;UBERON:0006562!5.84e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0004151;9.41e-23;3!UBERON:0003978;2.52e-22;3!UBERON:0000946;2.52e-22;3!UBERON:0007100;3.50e-22;25!UBERON:0002081;8.34e-16;2!UBERON:0002133;1.56e-15;2!UBERON:0005090;2.32e-15;2!UBERON:0001630;2.32e-15;2!UBERON:0000948;1.87e-11;22!UBERON:0002134;5.59e-09;1!UBERON:0005208;5.59e-09;1!UBERON:0004145;5.59e-09;1!UBERON:0005946;5.59e-09;1!UBERON:0005965;5.59e-09;1!UBERON:0002078;5.59e-09;1!UBERON:0004911;6.03e-09;1!UBERON:0007029;8.45e-09;1!UBERON:0001389;8.45e-09;1!UBERON:0000026;8.45e-09;1!UBERON:0008784;8.45e-09;1!UBERON:0006058;8.45e-09;1!UBERON:0003663;8.45e-09;1!UBERON:0004256;8.45e-09;1!UBERON:0004708;8.45e-09;1!UBERON:0002101;8.45e-09;1!UBERON:0004709;8.45e-09;1!UBERON:0002529;8.45e-09;1!UBERON:0010538;8.45e-09;1!UBERON:0003661;8.45e-09;1!UBERON:0010890;8.45e-09;1!UBERON:0002471;8.45e-09;1!UBERON:0001383;8.45e-09;1!UBERON:0010758;8.45e-09;1!UBERON:0010707;8.45e-09;1!UBERON:0000978;8.45e-09;1!UBERON:0002103;8.45e-09;1!UBERON:0001665;8.45e-09;1!UBERON:0003823;8.45e-09;1!UBERON:0000154;8.45e-09;1!UBERON:0010709;8.45e-09;1!UBERON:0002084;1.06e-08;1!UBERON:0002082;1.06e-08;1!UBERON:0002079;1.53e-08;1!UBERON:0002146;1.53e-08;1!UBERON:0005623;1.53e-08;1!UBERON:0002135;2.84e-08;1!UBERON:0002426;2.84e-08;1!UBERON:0003831;2.84e-08;1!UBERON:0003898;2.84e-08;1!UBERON:0004830;2.84e-08;1!UBERON:0003830;2.84e-08;1!UBERON:0005175;2.84e-08;1!UBERON:0001774;2.84e-08;1!UBERON:0001103;2.84e-08;1!UBERON:0010313;4.70e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.09e-22,3;UBERON:0003978,1.82e-22,3;UBERON:0009751,1.82e-22,3;UBERON:0000946,1.82e-22,3;UBERON:0002523,1.82e-22,3;UBERON:0005983,1.82e-22,3;UBERON:0002165,1.82e-22,3;UBERON:0002062,1.82e-22,3;UBERON:0007280,1.82e-22,3;UBERON:0007100,1.65e-20,27;UBERON:0002081,8.66e-16,2;UBERON:0010227,8.66e-16,2;UBERON:0002133,1.16e-15,2;UBERON:0005090,2.08e-15,2;UBERON:0001630,2.08e-15,2;UBERON:0007023,5.85e-15,114;UBERON:0003103,3.79e-13,68;UBERON:0000948,1.79e-10,24;UBERON:0005498,1.79e-10,24;UBERON:0004140,1.79e-10,24;UBERON:0009881,1.79e-10,24;UBERON:0004141,1.79e-10,24;UBERON:0003084,1.79e-10,24;UBERON:0007005,1.79e-10,24;UBERON:0004139,1.79e-10,24;UBERON:0004291,1.79e-10,24;UBERON:0004797,6.07e-10,7;UBERON:0002134,5.59e-09,1;UBERON:0005208,5.59e-09,1;UBERON:0005946,5.59e-09,1;UBERON:0005965,5.59e-09,1;UBERON:0002078,5.59e-09,1;UBERON:0004911,6.03e-09,1;UBERON:0007029,8.15e-09,1;UBERON:0005418,8.78e-09,1;UBERON:0001389,8.78e-09,1;UBERON:0000026,8.78e-09,1;UBERON:0008784,8.78e-09,1;UBERON:0006058,8.78e-09,1;UBERON:0003663,8.78e-09,1;UBERON:0004256,8.78e-09,1;UBERON:0004708,8.78e-09,1;UBERON:0002101,8.78e-09,1;UBERON:0004709,8.78e-09,1;UBERON:0002529,8.78e-09,1;UBERON:0010538,8.78e-09,1;UBERON:0003661,8.78e-09,1;UBERON:0010890,8.78e-09,1;UBERON:0002471,8.78e-09,1;UBERON:0001383,8.78e-09,1;UBERON:0004357,8.78e-09,1;UBERON:0004347,8.78e-09,1;UBERON:0005420,8.78e-09,1;UBERON:0005732,8.78e-09,1;UBERON:0010758,8.78e-09,1;UBERON:0010707,8.78e-09,1;UBERON:0000978,8.78e-09,1;UBERON:0002103,8.78e-09,1;UBERON:0001665,8.78e-09,1;UBERON:0003823,8.78e-09,1;UBERON:0000154,8.78e-09,1;UBERON:0010709,8.78e-09,1;UBERON:0005733,8.78e-09,1;UBERON:0005730,8.78e-09,1;UBERON:0002084,1.18e-08,1;UBERON:0002082,1.18e-08,1;UBERON:0010226,1.18e-08,1;UBERON:0002146,1.48e-08,1;UBERON:0005623,1.48e-08,1;UBERON:0002079,1.59e-08,1;UBERON:0002135,2.13e-08,1;UBERON:0002426,2.46e-08,1;UBERON:0003831,2.46e-08,1;UBERON:0003898,2.46e-08,1;UBERON:0004830,2.46e-08,1;UBERON:0003830,2.46e-08,1;UBERON:0005175,2.46e-08,1;UBERON:0001774,2.46e-08,1;UBERON:0001103,2.46e-08,1;UBERON:0010084,2.46e-08,1;UBERON:0010313,4.28e-07,10;UBERON:0002342,4.28e-07,10;UBERON:0005062,4.28e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896681151948218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.15334352941955,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0.796991953004279,0.828851746593443,0,0,0,0,0,0,0,3.74844941420348,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.538651809526579,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,1.30586246527318,0,0,0.995261931078505,1.76915129006678,3.66618086960175,0,0,0,0,1.60515529459758,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.678923115418936,0,0.90392296312213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,2.10309883423452,1.67569440763353,2.52076466412852,12.2038414178058,2.79550600698588,6.43839072204856,2.67805748930247,8.1963836433806,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.0607495566580247,0,0,0.157363764404994,0,0,0,2.1440859791201,3.31045985182716,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,1.2534494701135,0.919036730290385,0,0,0,0,0.3755727921195,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0.429642228169954,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,1.02496607435179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0.798169295285756,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0.451261970095544,0,0,0,0,0,0.135075169236789,0,0.620060389503552,0,0,0,0.992422356778588,0,0,0,0,0.606965604236632,0,0.354809480650555,0,0,0.0679697329768317,0,0,0,0.627944742804112,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0.4582137370881,0,0,9.39585627101456,0,0,4.53200186031526,3.90118666053739,0,4.85710993059139,0,0,0,0.11294608203896,0,0,0.0771741581079447,0,0,0.735444965261716,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06090177505535,0.267964130156178,0,0.103432995861895,1.49263787330687,0.952257725854961,0.0645889098360061,0.496597714366863,0,0.190941474834495,0.606351566874658,0.870866991587845,2.05339980651169,0.26940821205835,0.645499848534087,1.33064142618405,0,0,0,0,0,0.244482888365733,0,0,1.61019034872821,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896681151948218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.15334352941955,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0.796991953004279,0.828851746593443,0,0,0,0,0,0,0,3.74844941420348,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.538651809526579,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,1.30586246527318,0,0,0.995261931078505,1.76915129006678,3.66618086960175,0,0,0,0,1.60515529459758,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.678923115418936,0,0.90392296312213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,2.10309883423452,1.67569440763353,2.52076466412852,12.2038414178058,2.79550600698588,6.43839072204856,2.67805748930247,8.1963836433806,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.0607495566580247,0,0,0.157363764404994,0,0,0,2.1440859791201,3.31045985182716,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,1.2534494701135,0.919036730290385,0,0,0,0,0.3755727921195,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0.429642228169954,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,1.02496607435179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0.798169295285756,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0.451261970095544,0,0,0,0,0,0.135075169236789,0,0.620060389503552,0,0,0,0.992422356778588,0,0,0,0,0.606965604236632,0,0.354809480650555,0,0,0.0679697329768317,0,0,0,0.627944742804112,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0.4582137370881,0,0,9.39585627101456,0,0,4.53200186031526,3.90118666053739,0,4.85710993059139,0,0,0,0.11294608203896,0,0,0.0771741581079447,0,0,0.735444965261716,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06090177505535,0.267964130156178,0,0.103432995861895,1.49263787330687,0.952257725854961,0.0645889098360061,0.496597714366863,0,0.190941474834495,0.606351566874658,0.870866991587845,2.05339980651169,0.26940821205835,0.645499848534087,1.33064142618405,0,0,0,0,0,0.244482888365733,0,0,1.61019034872821,0 | ||
|short_description=p@chr6:168335523..168335538,+ | |short_description=p@chr6:168335523..168335538,+ | ||
}} | }} |
Latest revision as of 22:13, 30 July 2015
Short description: | p@chr6:168335523..168335538, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:168335523..168335538, + |
Coexpression cluster: | C1795_heart_skeletal_adipose_breast_left_bladder_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 6.03e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 8.66e-16 | 2 |
ovary epithelial cancer | 6.03e-09 | 1 |
vascular disease | 1.27e-08 | 1 |
ischemia | 1.27e-08 | 1 |
extrinsic cardiomyopathy | 1.27e-08 | 1 |
myocardial ischemia | 1.27e-08 | 1 |
myocardial infarction | 1.27e-08 | 1 |
cardiovascular system disease | 2.47e-08 | 4 |