FFCP PHASE1:Hg19::chr6:12296687..12296706,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:12296687..12296706,+ | |||
|coexpression_cluster_id=C4552 | |||
|description=CAGE_peak_at_chr6:12296687..12296706,+ | |description=CAGE_peak_at_chr6:12296687..12296706,+ | ||
|id=chr6:12296687..12296706,+ | |id=chr6:12296687..12296706,+ | ||
|ontology_enrichment_celltype=CL:0002139!3.54e-12!24;CL:0000066!6.39e-11!254;CL:0000115!1.00e-09!35;CL:0000213!1.47e-09!57;CL:0000215!1.47e-09!57;CL:0005020!1.08e-07!6;CL:0002138!1.08e-07!6;CL:0005022!1.08e-07!6;CL:0000071!5.45e-07!18;CL:0002546!5.45e-07!18;CL:0002078!6.39e-07!44 | |ontology_enrichment_celltype=CL:0002139!3.54e-12!24;CL:0000066!6.39e-11!254;CL:0000115!1.00e-09!35;CL:0000213!1.47e-09!57;CL:0000215!1.47e-09!57;CL:0005020!1.08e-07!6;CL:0002138!1.08e-07!6;CL:0005022!1.08e-07!6;CL:0000071!5.45e-07!18;CL:0002546!5.45e-07!18;CL:0002078!6.39e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.60e-24;24!CL:0000115;1.90e-22;36!CL:0002138;4.46e-19;6!CL:1000306;6.57e-17;4!CL:0002547;6.57e-17;4!CL:0002078;9.57e-15;45!CL:0000071;3.10e-11;18!CL:0000213;2.16e-09;58!CL:0000215;2.16e-09;58!CL:0002188;7.38e-09;5!CL:1000413;4.72e-08;9!CL:0002144;3.51e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,4.90e-25,36;CL:0002139,8.25e-25,24;CL:0002078,2.60e-19,45;CL:0005020,4.10e-19,6;CL:0002138,4.10e-19,6;CL:0005022,4.10e-19,6;CL:1000306,3.50e-17,4;CL:0002547,3.50e-17,4;CL:0000213,3.56e-16,58;CL:0000215,3.56e-16,58;CL:0000071,1.95e-11,18;CL:0002546,1.95e-11,18;CL:0000222,6.49e-10,121;CL:0002188,7.60e-09,5;CL:1000413,3.65e-08,9;CL:0002144,3.22e-07,3 | |||
|ontology_enrichment_development_v019=CL:0005022;4.46e-19;6!CL:0002546;3.10e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.48e-12!79;UBERON:0007798!4.48e-12!79;UBERON:0004872!1.60e-11!84;UBERON:0000055!2.27e-11!69;UBERON:0004535!5.07e-11!110;UBERON:0001009!2.67e-10!113;UBERON:0000477!2.16e-09!286;UBERON:0003914!3.51e-09!118;UBERON:0001637!1.12e-08!42;UBERON:0003509!1.12e-08!42;UBERON:0004572!1.12e-08!42;UBERON:0001981!1.26e-08!60;UBERON:0007500!1.26e-08!60;UBERON:0004537!1.26e-08!60;UBERON:0006965!1.26e-08!60;UBERON:0004111!2.47e-08!241;UBERON:0000467!4.20e-08!625;UBERON:0000480!5.20e-08!626;UBERON:0000025!2.14e-07!194;UBERON:0000468!2.23e-07!659;UBERON:0001986!5.45e-07!18;UBERON:0004638!5.45e-07!18;UBERON:0004852!5.45e-07!18;UBERON:0000483!8.87e-07!309;UBERON:0000119!9.33e-07!312 | |ontology_enrichment_uberon=UBERON:0002049!4.48e-12!79;UBERON:0007798!4.48e-12!79;UBERON:0004872!1.60e-11!84;UBERON:0000055!2.27e-11!69;UBERON:0004535!5.07e-11!110;UBERON:0001009!2.67e-10!113;UBERON:0000477!2.16e-09!286;UBERON:0003914!3.51e-09!118;UBERON:0001637!1.12e-08!42;UBERON:0003509!1.12e-08!42;UBERON:0004572!1.12e-08!42;UBERON:0001981!1.26e-08!60;UBERON:0007500!1.26e-08!60;UBERON:0004537!1.26e-08!60;UBERON:0006965!1.26e-08!60;UBERON:0004111!2.47e-08!241;UBERON:0000467!4.20e-08!625;UBERON:0000480!5.20e-08!626;UBERON:0000025!2.14e-07!194;UBERON:0000468!2.23e-07!659;UBERON:0001986!5.45e-07!18;UBERON:0004638!5.45e-07!18;UBERON:0004852!5.45e-07!18;UBERON:0000483!8.87e-07!309;UBERON:0000119!9.33e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;6.57e-17;4!UBERON:0000415;6.57e-17;4!UBERON:0007240;6.57e-17;4!UBERON:0005742;6.57e-17;4!UBERON:0005734;6.57e-17;4!UBERON:0004664;6.57e-17;4!UBERON:0004663;6.57e-17;4!UBERON:0001473;3.10e-14;8!UBERON:0004536;3.10e-14;8!UBERON:0006558;3.10e-14;8!UBERON:0000055;5.76e-12;65!UBERON:0002465;2.53e-11;10!UBERON:0004638;3.10e-11;18!UBERON:0001986;3.10e-11;18!UBERON:0004852;3.10e-11;18!UBERON:0001637;3.78e-11;42!UBERON:0003509;3.78e-11;42!UBERON:0004572;3.78e-11;42!UBERON:0007500;2.16e-09;56!UBERON:0001981;2.16e-09;56!UBERON:0004537;2.16e-09;56!UBERON:0000947;4.60e-09;21!UBERON:0010191;4.60e-09;21!UBERON:0000487;5.18e-09;22!UBERON:0000490;7.22e-09;33!UBERON:0002049;3.17e-08;75!UBERON:0007798;3.17e-08;75!UBERON:0004573;4.12e-08;33!UBERON:0004571;4.12e-08;33!UBERON:0003915;4.72e-08;9!UBERON:0004700;4.72e-08;9!UBERON:0001917;4.72e-08;9!UBERON:0006914;8.21e-08;25!UBERON:0010523;3.51e-07;3!UBERON:0001915;3.51e-07;3!UBERON:0001982;3.51e-07;3 | |||
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| ||
|short_description=p@chr6:12296687..12296706,+ | |short_description=p@chr6:12296687..12296706,+ | ||
}} | }} |
Latest revision as of 18:57, 30 July 2015
Short description: | p@chr6:12296687..12296706, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:12296687..12296706, + |
Coexpression cluster: | C4552_Lymphatic_Endothelial_Renal_pharyngeal_papillary_amniotic_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 4.90e-25 | 36 |
endothelial cell of vascular tree | 8.25e-25 | 24 |
meso-epithelial cell | 2.60e-19 | 45 |
lymphangioblast | 4.10e-19 | 6 |
endothelial cell of lymphatic vessel | 4.10e-19 | 6 |
vascular lymphangioblast | 4.10e-19 | 6 |
fibroblast of tunica adventitia of artery | 3.50e-17 | 4 |
fibroblast of the aortic adventitia | 3.50e-17 | 4 |
lining cell | 3.56e-16 | 58 |
barrier cell | 3.56e-16 | 58 |
blood vessel endothelial cell | 1.95e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.95e-11 | 18 |
mesodermal cell | 6.49e-10 | 121 |
glomerular endothelial cell | 7.60e-09 | 5 |
endothelial cell of artery | 3.65e-08 | 9 |
capillary endothelial cell | 3.22e-07 | 3 |