FFCP PHASE1:Hg19::chr6:12296648..12296663,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:12296648..12296663,+ | |||
|coexpression_cluster_id=C4552 | |coexpression_cluster_id=C4552 | ||
|description=CAGE_peak_at_chr6:12296648..12296663,+ | |description=CAGE_peak_at_chr6:12296648..12296663,+ | ||
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|ontology_enrichment_celltype=CL:0002139!1.52e-18!24;CL:0000115!1.34e-14!35;CL:0000071!1.77e-12!18;CL:0002546!1.77e-12!18;CL:0002078!7.19e-11!44;CL:0000213!2.84e-09!57;CL:0000215!2.84e-09!57;CL:0000066!6.62e-09!254;CL:0000222!3.30e-08!119;CL:0005020!6.56e-08!6;CL:0002138!6.56e-08!6;CL:0005022!6.56e-08!6 | |ontology_enrichment_celltype=CL:0002139!1.52e-18!24;CL:0000115!1.34e-14!35;CL:0000071!1.77e-12!18;CL:0002546!1.77e-12!18;CL:0002078!7.19e-11!44;CL:0000213!2.84e-09!57;CL:0000215!2.84e-09!57;CL:0000066!6.62e-09!254;CL:0000222!3.30e-08!119;CL:0005020!6.56e-08!6;CL:0002138!6.56e-08!6;CL:0005022!6.56e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.25e-23;24!CL:0000115;6.35e-20;36!CL:0002138;5.03e-17;6!CL:0002078;2.20e-12;45!CL:0000071;1.77e-11;18!CL:0002595;3.68e-11;5!CL:0002144;2.83e-09;3!CL:0000213;4.92e-07;58!CL:0000215;4.92e-07;58!CL:1000306;7.63e-07;4!CL:0002547;7.63e-07;4 | |ontology_enrichment_celltype_v019=CL:0002139;1.25e-23;24!CL:0000115;6.35e-20;36!CL:0002138;5.03e-17;6!CL:0002078;2.20e-12;45!CL:0000071;1.77e-11;18!CL:0002595;3.68e-11;5!CL:0002144;2.83e-09;3!CL:0000213;4.92e-07;58!CL:0000215;4.92e-07;58!CL:1000306;7.63e-07;4!CL:0002547;7.63e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,8.50e-24,24;CL:0000115,3.19e-22,36;CL:0002078,2.68e-17,45;CL:0005020,5.26e-17,6;CL:0002138,5.26e-17,6;CL:0005022,5.26e-17,6;CL:0000213,6.91e-13,58;CL:0000215,6.91e-13,58;CL:0000222,2.39e-12,121;CL:0000071,1.29e-11,18;CL:0002546,1.29e-11,18;CL:0002595,3.15e-11,5;CL:0002144,2.51e-09,3 | |||
|ontology_enrichment_development_v019=CL:0005022;5.03e-17;6!CL:0002546;1.77e-11;18!UBERON:0003099;4.20e-07;1!UBERON:0003852;4.20e-07;1 | |ontology_enrichment_development_v019=CL:0005022;5.03e-17;6!CL:0002546;1.77e-11;18!UBERON:0003099;4.20e-07;1!UBERON:0003852;4.20e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3112;4.20e-07;1 | |ontology_enrichment_disease_v019=DOID:3112;4.20e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3112,3.21e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000055!2.87e-21!69;UBERON:0002049!1.05e-20!79;UBERON:0007798!1.05e-20!79;UBERON:0001981!7.81e-18!60;UBERON:0007500!7.81e-18!60;UBERON:0004537!7.81e-18!60;UBERON:0006965!7.81e-18!60;UBERON:0004872!2.85e-16!84;UBERON:0004535!5.47e-16!110;UBERON:0001009!4.45e-15!113;UBERON:0003914!5.30e-15!118;UBERON:0001637!1.50e-14!42;UBERON:0003509!1.50e-14!42;UBERON:0004572!1.50e-14!42;UBERON:0001986!1.77e-12!18;UBERON:0004638!1.77e-12!18;UBERON:0004852!1.77e-12!18;UBERON:0000025!2.17e-12!194;UBERON:0000487!3.95e-12!22;UBERON:0004111!4.96e-12!241;UBERON:0000477!6.10e-12!286;UBERON:0004573!3.24e-10!33;UBERON:0004571!3.24e-10!33;UBERON:0006914!5.80e-10!25;UBERON:0000483!2.34e-08!309;UBERON:0000947!3.59e-08!21;UBERON:0010191!3.59e-08!21;UBERON:0000119!4.85e-08!312 | |ontology_enrichment_uberon=UBERON:0000055!2.87e-21!69;UBERON:0002049!1.05e-20!79;UBERON:0007798!1.05e-20!79;UBERON:0001981!7.81e-18!60;UBERON:0007500!7.81e-18!60;UBERON:0004537!7.81e-18!60;UBERON:0006965!7.81e-18!60;UBERON:0004872!2.85e-16!84;UBERON:0004535!5.47e-16!110;UBERON:0001009!4.45e-15!113;UBERON:0003914!5.30e-15!118;UBERON:0001637!1.50e-14!42;UBERON:0003509!1.50e-14!42;UBERON:0004572!1.50e-14!42;UBERON:0001986!1.77e-12!18;UBERON:0004638!1.77e-12!18;UBERON:0004852!1.77e-12!18;UBERON:0000025!2.17e-12!194;UBERON:0000487!3.95e-12!22;UBERON:0004111!4.96e-12!241;UBERON:0000477!6.10e-12!286;UBERON:0004573!3.24e-10!33;UBERON:0004571!3.24e-10!33;UBERON:0006914!5.80e-10!25;UBERON:0000483!2.34e-08!309;UBERON:0000947!3.59e-08!21;UBERON:0010191!3.59e-08!21;UBERON:0000119!4.85e-08!312 | ||
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| ||
|short_description=p@chr6:12296648..12296663,+ | |short_description=p@chr6:12296648..12296663,+ | ||
}} | }} |
Latest revision as of 18:56, 30 July 2015
Short description: | p@chr6:12296648..12296663, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:12296648..12296663, + |
Coexpression cluster: | C4552_Lymphatic_Endothelial_Renal_pharyngeal_papillary_amniotic_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 8.50e-24 | 24 |
endothelial cell | 3.19e-22 | 36 |
meso-epithelial cell | 2.68e-17 | 45 |
lymphangioblast | 5.26e-17 | 6 |
endothelial cell of lymphatic vessel | 5.26e-17 | 6 |
vascular lymphangioblast | 5.26e-17 | 6 |
lining cell | 6.91e-13 | 58 |
barrier cell | 6.91e-13 | 58 |
mesodermal cell | 2.39e-12 | 121 |
blood vessel endothelial cell | 1.29e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.29e-11 | 18 |
smooth muscle cell of the subclavian artery | 3.15e-11 | 5 |
capillary endothelial cell | 2.51e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 3.21e-07 | 1 |