FFCP PHASE1:Hg19::chr5:66942627..66942643,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-10bp_to_ENST00000507298_5end | |||
|cluster_id=chr5:66942627..66942643,- | |||
|coexpression_cluster_id=C458 | |||
|description=CAGE_peak_1_at_ENST00000507298_5end | |||
|id=chr5:66942627..66942643,- | |||
|ontology_enrichment_celltype=CL:0002623!2.37e-21!3;CL:0000622!5.00e-13!5;CL:0000154!6.17e-11!6;CL:0000064!2.97e-09!3;CL:0005012!2.97e-09!3;CL:0000067!2.97e-09!3;CL:0002304!2.97e-09!3;CL:0000150!1.97e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002623;2.79e-195;3!CL:0000622;7.76e-118;5!CL:0000154;1.83e-98;6!CL:0000150;3.75e-66;9!CL:0002251;1.56e-30;20!CL:0000151;1.32e-18;36!CL:0002076;1.21e-11;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,2.79e-195,3;CL:0000622,7.76e-118,5;CL:0000154,1.83e-98,6;CL:0000150,3.75e-66,9;CL:0002251,1.56e-30,20;CL:0000151,1.62e-17,36;CL:0002076,3.52e-15,42;CL:0000223,2.67e-11,58 | |||
|ontology_enrichment_development_v019=CL:0000223;2.95e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!1.52e-16!10;UBERON:0007023!9.06e-13!115;UBERON:0001044!6.17e-11!6;UBERON:0003293!6.17e-11!6;UBERON:0003294!6.17e-11!6;UBERON:0010047!6.17e-11!6;UBERON:0000167!6.17e-11!6;UBERON:0001778!2.97e-09!3;UBERON:0001775!2.97e-09!3;UBERON:0004177!1.16e-08!7;UBERON:0006122!3.32e-08!1;UBERON:0002135!4.07e-08!1;UBERON:0000166!8.37e-08!21;UBERON:0002363!9.10e-08!1;UBERON:0007647!9.10e-08!1;UBERON:0010115!9.10e-08!1;UBERON:0006834!9.72e-08!1;UBERON:0001444!1.39e-07!48;UBERON:0002370!2.84e-07!4;UBERON:0005058!2.84e-07!4;UBERON:0009113!2.84e-07!4;UBERON:0003295!2.84e-07!4;UBERON:0005562!2.84e-07!4;UBERON:0000488!3.78e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;1.83e-98;6!UBERON:0003293;1.83e-98;6!UBERON:0003294;1.83e-98;6!UBERON:0010047;1.83e-98;6!UBERON:0003408;1.83e-98;6!UBERON:0000167;1.83e-98;6!UBERON:0001041;4.85e-43;14!UBERON:0000161;4.52e-32;19!UBERON:0000166;4.52e-32;19!UBERON:0000165;3.57e-22;28!UBERON:0002365;8.88e-21;31!UBERON:0002330;8.88e-21;31!UBERON:0004921;1.94e-16;33!UBERON:0000033;1.69e-09;50!UBERON:0007811;1.70e-09;52!UBERON:0000153;1.23e-08;54!UBERON:0001444;3.38e-08;48!UBERON:0001004;3.64e-08;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.83e-98,6;UBERON:0003293,1.83e-98,6;UBERON:0003294,1.83e-98,6;UBERON:0010047,1.83e-98,6;UBERON:0000167,1.83e-98,6;UBERON:0003408,1.10e-59,10;UBERON:0000166,7.08e-28,22;UBERON:0000165,1.88e-21,29;UBERON:0000930,1.88e-21,29;UBERON:0002365,3.79e-20,31;UBERON:0002330,3.79e-20,31;UBERON:0000161,1.62e-17,36;UBERON:0001444,3.57e-13,49;UBERON:0000033,1.15e-11,56;UBERON:0002530,3.99e-11,59;UBERON:0002553,8.52e-11,61;UBERON:0000153,1.22e-10,62;UBERON:0007811,1.22e-10,62;UBERON:0001004,4.40e-09,74;UBERON:0001041,7.10e-08,87;UBERON:0003102,4.88e-07,99 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,10.1535920439888,8.70664233179145,2.76503864725637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0.0645889098360061,0.31037357147929,0,0.700118741059814,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p1@ENST00000507298 | |||
}} |
Latest revision as of 15:52, 30 July 2015
Short description: | p1@ENST00000507298 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000507298_5end |
Coexpression cluster: | C458_salivary_parietal_middle_locus_medial_occipital_globus |
Association with transcript: | -10bp_to_ENST00000507298_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 2.79e-195 | 3 |
acinar cell | 7.76e-118 | 5 |
protein secreting cell | 1.83e-98 | 6 |
glandular epithelial cell | 3.75e-66 | 9 |
epithelial cell of alimentary canal | 1.56e-30 | 20 |
secretory cell | 1.62e-17 | 36 |
endo-epithelial cell | 3.52e-15 | 42 |
endodermal cell | 2.67e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 1.83e-98 | 6 |
gland of oral region | 1.83e-98 | 6 |
gland of foregut | 1.83e-98 | 6 |
oral gland | 1.83e-98 | 6 |
oral cavity | 1.83e-98 | 6 |
gland of gut | 1.10e-59 | 10 |
oral opening | 7.08e-28 | 22 |
mouth | 1.88e-21 | 29 |
stomodeum | 1.88e-21 | 29 |
exocrine gland | 3.79e-20 | 31 |
exocrine system | 3.79e-20 | 31 |
orifice | 1.62e-17 | 36 |
subdivision of head | 3.57e-13 | 49 |
head | 1.15e-11 | 56 |
gland | 3.99e-11 | 59 |
anatomical cavity | 8.52e-11 | 61 |
anterior region of body | 1.22e-10 | 62 |
craniocervical region | 1.22e-10 | 62 |
respiratory system | 4.40e-09 | 74 |
foregut | 7.10e-08 | 87 |
surface structure | 4.88e-07 | 99 |