FFCP PHASE1:Hg19::chr5:32792059..32792063,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:32792059..32792063,+ | |||
|coexpression_cluster_id=C322 | |coexpression_cluster_id=C322 | ||
|description=CAGE_peak_at_chr5:32792059..32792063,+ | |description=CAGE_peak_at_chr5:32792059..32792063,+ | ||
|id=chr5:32792059..32792063,+ | |id=chr5:32792059..32792063,+ | ||
|ontology_enrichment_celltype=CL:0000054;1.64e-09;2!CL:0000137;1.64e-09;2!CL:0000092;1.64e-09;2!CL:0000346;9.37e-07;3!CL:1000428;9.37e-07;3!CL:0002582;9.37e-07;3 | |ontology_enrichment_celltype=CL:0002582!1.61e-09!3;CL:0000243!1.10e-07!15;CL:0000125!1.10e-07!15;CL:0000030!1.10e-07!15;CL:0000339!1.10e-07!15;CL:0002620!2.10e-07!23;CL:0000095!9.11e-07!17;CL:0000123!9.11e-07!17 | ||
| | |ontology_enrichment_celltype_v019=CL:0000054;1.64e-09;2!CL:0000137;1.64e-09;2!CL:0000092;1.64e-09;2!CL:0000346;9.37e-07;3!CL:1000428;9.37e-07;3!CL:0002582;9.37e-07;3 | ||
|ontology_enrichment_disease=DOID:3112;3.16e-18;1!DOID:0060085;1.12e-17;1!DOID:3165;1.12e-17;1!DOID:0060121;1.12e-17;1!DOID:2438;1.12e-17;1!DOID:4418;1.12e-17;1!DOID:200;1.64e-09;2!DOID:4305;1.64e-09;2!DOID:4556;6.69e-07;3 | |ontology_enrichment_celltype_v019_2=CL:0000054,1.71e-09,2;CL:0000137,1.71e-09,2;CL:0000092,1.71e-09,2;CL:0000346,8.62e-07,3;CL:1000428,8.62e-07,3 | ||
|ontology_enrichment_uberon=UBERON:0002046;1.61e-14;5!UBERON:0002097;2.44e-07;41!UBERON:0000412;9.37e-07;3!UBERON:0001992;9.37e-07;3 | |ontology_enrichment_development_v019=UBERON:0007123;1.61e-14;5!UBERON:0006238;6.16e-07;10 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;3.16e-18;1!DOID:0060085;1.12e-17;1!DOID:3165;1.12e-17;1!DOID:0060121;1.12e-17;1!DOID:2438;1.12e-17;1!DOID:4418;1.12e-17;1!DOID:200;1.64e-09;2!DOID:4305;1.64e-09;2!DOID:4556;6.69e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,3.16e-18,1;DOID:0060085,1.22e-17,1;DOID:3165,1.22e-17,1;DOID:0060121,1.22e-17,1;DOID:2438,1.22e-17,1;DOID:4418,1.22e-17,1;DOID:200,1.71e-09,2;DOID:4305,1.71e-09,2;DOID:4556,6.50e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.07e-08!45;UBERON:0002416!1.07e-08!45;UBERON:0002097!1.50e-08!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;1.61e-14;5!UBERON:0002097;2.44e-07;41!UBERON:0000412;9.37e-07;3!UBERON:0001992;9.37e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.61e-14,5;UBERON:0004117,1.61e-14,5;UBERON:0007689,1.61e-14,5;UBERON:0007123,1.61e-14,5;UBERON:0003091,1.61e-14,5;UBERON:0009722,4.30e-07,11;UBERON:0007690,4.30e-07,11;UBERON:0000412,8.62e-07,3;UBERON:0001992,8.62e-07,3;UBERON:0002097,9.28e-07,41 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597794722207204,0,0.323745888736263,0.561803226808994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51145489964407,0,0,0.600182192168805,0,0,0,0.168776332241266,0,3.28163906517349,0,0,0,0,0.339121184620975,0,0,0,0,0,0.116193942869518,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462629081407967,0,0.246381468041427,1.03850885836724,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0,0,0,0,0,0,0,0,0,0.275673144969061,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.306806047506464,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,1.19228767021794,0,0,0,0,0,0,0,0,0.14405479798815,0,0,1.22313785466253,2.30126261887133,0.713987523454252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,3.69601177817923,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0.470531639396343,0,0,0.298509605773748,0.233713309847224,0,0,0,0,0,0,0,0,0.318593534327405,0,0.465788870628778,0,0,0,0,0,0,1.09109195521536,0.107410557042488,0,0,0.800055529326307,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0.60511520611056,0,0,5.73201711285339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0.0852134047591577,0,0,0.93061915699296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41157948686277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.86760390709398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:32792059..32792063,+ | |short_description=p@chr5:32792059..32792063,+ | ||
}} | }} |
Latest revision as of 14:23, 30 July 2015
Short description: | p@chr5:32792059..32792063, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:32792059..32792063, + |
Coexpression cluster: | C322_thyroid_anaplastic_gastric_testis_papillary_fibrous_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 1.71e-09 | 2 |
osteocyte | 1.71e-09 | 2 |
osteoclast | 1.71e-09 | 2 |
hair follicle dermal papilla cell | 8.62e-07 | 3 |
stem cell of epidermis | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 1.61e-14 | 5 |
pharyngeal pouch | 1.61e-14 | 5 |
thyroid diverticulum | 1.61e-14 | 5 |
pharyngeal pouch 2 | 1.61e-14 | 5 |
thyroid primordium | 1.61e-14 | 5 |
entire pharyngeal arch endoderm | 4.30e-07 | 11 |
early pharyngeal endoderm | 4.30e-07 | 11 |
dermal papilla | 8.62e-07 | 3 |
papillary layer of dermis | 8.62e-07 | 3 |
skin of body | 9.28e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 3.16e-18 | 1 |
organ system benign neoplasm | 1.22e-17 | 1 |
skin benign neoplasm | 1.22e-17 | 1 |
integumentary system benign neoplasm | 1.22e-17 | 1 |
dermis tumor | 1.22e-17 | 1 |
cutaneous fibrous histiocytoma | 1.22e-17 | 1 |
giant cell tumor | 1.71e-09 | 2 |
bone giant cell tumor | 1.71e-09 | 2 |
lung large cell carcinoma | 6.50e-07 | 3 |