FFCP PHASE1:Hg19::chr5:167690700..167690720,+: Difference between revisions
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|id=chr5:167690700..167690720,+
|short_description=p@chr5:167690700..167690720,+
|description=CAGE_peak_at_chr5:167690700..167690720,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:167690700..167690720,+ | |||
|coexpression_cluster_id=C1956 | |||
|description=CAGE_peak_at_chr5:167690700..167690720,+ | |||
|id=chr5:167690700..167690720,+ | |||
|ontology_enrichment_celltype=CL:0002620!2.24e-09!23;CL:0000077!1.94e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.23e-16;23!CL:0000054;6.17e-09;2!CL:0000137;6.17e-09;2!CL:0000092;6.17e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.19e-16,23;CL:0000054,4.34e-09,2;CL:0000137,4.34e-09,2;CL:0000092,4.34e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0008814;6.17e-09;2!UBERON:0010056;6.17e-09;2 | |||
|ontology_enrichment_disease=DOID:17!1.04e-07!5;DOID:450!1.04e-07!5;DOID:66!1.04e-07!5;DOID:423!1.04e-07!5;DOID:0080000!1.04e-07!5;DOID:11722!1.04e-07!5;DOID:7!3.08e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:17;3.88e-13;5!DOID:450;3.88e-13;5!DOID:66;3.88e-13;5!DOID:423;3.88e-13;5!DOID:0080000;3.88e-13;5!DOID:11722;3.88e-13;5!DOID:154;6.17e-09;2!DOID:200;6.17e-09;2!DOID:4236;6.17e-09;2!DOID:4305;6.17e-09;2!DOID:7;1.01e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.23e-13,5;DOID:450,3.23e-13,5;DOID:66,3.23e-13,5;DOID:423,3.23e-13,5;DOID:0080000,3.23e-13,5;DOID:11722,3.23e-13,5;DOID:7,7.80e-10,39;DOID:200,4.34e-09,2;DOID:4305,4.34e-09,2;DOID:154,5.94e-09,2;DOID:4236,5.94e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002346!1.40e-08!90;UBERON:0002097!1.71e-08!40;UBERON:0003075!1.78e-08!86;UBERON:0007284!1.78e-08!86;UBERON:0000033!2.05e-08!123;UBERON:0000488!3.76e-08!4;UBERON:0003056!6.11e-08!61;UBERON:0000153!1.15e-07!129;UBERON:0007811!1.15e-07!129;UBERON:0002199!3.91e-07!45;UBERON:0002416!3.91e-07!45;UBERON:0002020!4.85e-07!34;UBERON:0003528!4.85e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;1.53e-16;1!UBERON:0009842;1.53e-16;1!UBERON:0003704;1.53e-16;1!UBERON:0001171;1.53e-16;1!UBERON:0001172;1.53e-16;1!UBERON:0001905;6.17e-09;2!UBERON:0002757;6.17e-09;2!UBERON:0010134;6.17e-09;2!UBERON:0005408;6.17e-09;2!UBERON:0001899;6.17e-09;2!UBERON:0002097;9.41e-08;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.21e-16,1;UBERON:0009842,1.21e-16,1;UBERON:0003704,1.21e-16,1;UBERON:0001171,1.21e-16,1;UBERON:0001172,1.21e-16,1;UBERON:0002097,2.36e-09,41;UBERON:0001905,8.09e-09,2;UBERON:0002757,8.09e-09,2;UBERON:0010134,8.09e-09,2;UBERON:0005408,8.09e-09,2;UBERON:0001899,8.09e-09,2;UBERON:0002199,2.47e-08,46;UBERON:0002416,2.47e-08,46 | |||
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| ||
|short_description=p@chr5:167690700..167690720,+ | |||
}} | }} |
Latest revision as of 12:46, 30 July 2015
Short description: | p@chr5:167690700..167690720, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:167690700..167690720, + |
Coexpression cluster: | C1956_Fibroblast_mesothelioma_Mesothelial_pineal_Mallassezderived_mesenchymal_osteoclastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.19e-16 | 23 |
bone matrix secreting cell | 4.34e-09 | 2 |
osteocyte | 4.34e-09 | 2 |
osteoclast | 4.34e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 1.21e-16 | 1 |
acinus | 1.21e-16 | 1 |
intrahepatic bile duct | 1.21e-16 | 1 |
portal lobule | 1.21e-16 | 1 |
hepatic acinus | 1.21e-16 | 1 |
skin of body | 2.36e-09 | 41 |
pineal body | 8.09e-09 | 2 |
regional part of epithalamus | 8.09e-09 | 2 |
secretory circumventricular organ | 8.09e-09 | 2 |
circumventricular organ | 8.09e-09 | 2 |
epithalamus | 8.09e-09 | 2 |
integument | 2.47e-08 | 46 |
integumental system | 2.47e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.23e-13 | 5 |
myotonic disease | 3.23e-13 | 5 |
muscle tissue disease | 3.23e-13 | 5 |
myopathy | 3.23e-13 | 5 |
muscular disease | 3.23e-13 | 5 |
myotonic dystrophy | 3.23e-13 | 5 |
disease of anatomical entity | 7.80e-10 | 39 |
giant cell tumor | 4.34e-09 | 2 |
bone giant cell tumor | 4.34e-09 | 2 |
mixed cell type cancer | 5.94e-09 | 2 |
carcinosarcoma | 5.94e-09 | 2 |