FFCP PHASE1:Hg19::chr5:134906500..134906526,+: Difference between revisions
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|id=chr5:134906500..134906526,+
|short_description=p@chr5:134906500..134906526,+
|description=CAGE_peak_at_chr5:134906500..134906526,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:134906500..134906526,+ | |||
|coexpression_cluster_id=C607 | |||
|description=CAGE_peak_at_chr5:134906500..134906526,+ | |||
|id=chr5:134906500..134906526,+ | |||
|ontology_enrichment_celltype=CL:0000317!3.42e-07!2;CL:1000448!3.42e-07!2;CL:0002308!3.42e-07!2;CL:0002140!3.42e-07!2;CL:0000575!6.65e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000317;5.48e-40;2!CL:1000448;5.48e-40;2!CL:0002308;5.48e-40;2!CL:0002140;5.48e-40;2!CL:0000362;2.11e-20;9!CL:0000622;1.12e-16;5!CL:0000154;4.53e-14;6!CL:0002159;2.25e-13;14!CL:0000150;1.05e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,5.49e-40,2;CL:1000448,5.49e-40,2;CL:0002308,5.49e-40,2;CL:0002140,5.49e-40,2;CL:0000362,2.11e-20,9;CL:0000622,1.12e-16,5;CL:0000154,4.53e-14,6;CL:0002159,2.25e-13,14;CL:0000150,1.05e-09,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;3.12e-21;1!DOID:3149;3.12e-21;1!DOID:0050619;6.31e-21;1!DOID:1357;6.31e-21;1!DOID:3451;2.60e-11;2!DOID:4159;2.60e-11;2!DOID:0060122;2.60e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,3.45e-21,1;DOID:3149,3.45e-21,1;DOID:0050619,6.31e-21,1;DOID:1357,6.31e-21,1;DOID:3451,2.73e-11,2;DOID:4159,2.73e-11,2;DOID:0060122,2.73e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.33e-12!115;UBERON:0000153!2.70e-12!129;UBERON:0007811!2.70e-12!129;UBERON:0000033!3.41e-12!123;UBERON:0000924!2.21e-10!173;UBERON:0006601!2.21e-10!173;UBERON:0004121!5.41e-10!169;UBERON:0003056!1.82e-09!61;UBERON:0001869!7.53e-09!32;UBERON:0001893!3.37e-08!34;UBERON:0005743!6.49e-08!86;UBERON:0002346!1.21e-07!90;UBERON:0000064!2.50e-07!219;UBERON:0003075!2.76e-07!86;UBERON:0007284!2.76e-07!86;UBERON:0002419!3.42e-07!2;UBERON:0007771!3.42e-07!2;UBERON:0003297!3.42e-07!2;UBERON:0001821!3.42e-07!2;UBERON:0003487!3.42e-07!2;UBERON:0001820!3.42e-07!2;UBERON:0005089!3.42e-07!2;UBERON:0005088!3.42e-07!2;UBERON:0002791!4.45e-07!33;UBERON:0002020!8.17e-07!34;UBERON:0003528!8.17e-07!34;UBERON:0000073!9.62e-07!94;UBERON:0001016!9.62e-07!94;UBERON:0000956!9.78e-07!25;UBERON:0000203!9.78e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;5.48e-40;2!UBERON:0007771;5.48e-40;2!UBERON:0003297;5.48e-40;2!UBERON:0001821;5.48e-40;2!UBERON:0003487;5.48e-40;2!UBERON:0001820;5.48e-40;2!UBERON:0001764;6.31e-21;1!UBERON:0001825;6.31e-21;1!UBERON:0001003;1.58e-12;15!UBERON:0007376;1.58e-12;15!UBERON:0002097;3.27e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,5.49e-40,2;UBERON:0007771,5.49e-40,2;UBERON:0003297,5.49e-40,2;UBERON:0001821,5.49e-40,2;UBERON:0003487,5.49e-40,2;UBERON:0001820,5.49e-40,2;UBERON:0005089,5.49e-40,2;UBERON:0005088,5.49e-40,2;UBERON:0001764,6.31e-21,1;UBERON:0001825,6.31e-21,1;UBERON:0001003,1.58e-12,15;UBERON:0007376,1.58e-12,15;UBERON:0007383,1.58e-12,15;UBERON:0002097,4.30e-08,41;UBERON:0002199,3.04e-07,46;UBERON:0002416,3.04e-07,46 | |||
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| ||
|short_description=p@chr5:134906500..134906526,+ | |||
}} | }} |
Latest revision as of 09:58, 30 July 2015
Short description: | p@chr5:134906500..134906526, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:134906500..134906526, + |
Coexpression cluster: | C607_small_cervical_Keratinocyte_Sebocyte_maxillary_normal_skin |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 5.49e-40 | 2 |
epithelial cell of sweat gland | 5.49e-40 | 2 |
epithelial cell of skin gland | 5.49e-40 | 2 |
acinar cell of sebaceous gland | 5.49e-40 | 2 |
epidermal cell | 2.11e-20 | 9 |
acinar cell | 1.12e-16 | 5 |
protein secreting cell | 4.53e-14 | 6 |
general ecto-epithelial cell | 2.25e-13 | 14 |
glandular epithelial cell | 1.05e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
skin gland | 5.49e-40 | 2 |
epidermis gland | 5.49e-40 | 2 |
gland of integumental system | 5.49e-40 | 2 |
sebaceous gland | 5.49e-40 | 2 |
skin sebaceous gland | 5.49e-40 | 2 |
sweat gland | 5.49e-40 | 2 |
sweat gland placode | 5.49e-40 | 2 |
sebaceous gland placode | 5.49e-40 | 2 |
maxillary sinus | 6.31e-21 | 1 |
paranasal sinus | 6.31e-21 | 1 |
skin epidermis | 1.58e-12 | 15 |
outer epithelium | 1.58e-12 | 15 |
enveloping layer of ectoderm | 1.58e-12 | 15 |
skin of body | 4.30e-08 | 41 |
integument | 3.04e-07 | 46 |
integumental system | 3.04e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.45e-21 | 1 |
keratoacanthoma | 3.45e-21 | 1 |
paranasal sinus cancer | 6.31e-21 | 1 |
maxillary sinus cancer | 6.31e-21 | 1 |
skin carcinoma | 2.73e-11 | 2 |
skin cancer | 2.73e-11 | 2 |
integumentary system cancer | 2.73e-11 | 2 |