FFCP PHASE1:Hg19::chr5:107007726..107007737,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:107007726..107007737,- | |||
|coexpression_cluster_id=C4447 | |||
|description=CAGE_peak_at_chr5:107007726..107007737,- | |description=CAGE_peak_at_chr5:107007726..107007737,- | ||
|id=chr5:107007726..107007737,- | |id=chr5:107007726..107007737,- | ||
|ontology_enrichment_celltype=CL:0000066!1.42e-09!254 | |ontology_enrichment_celltype=CL:0000066!1.42e-09!254 | ||
|ontology_enrichment_celltype_v019=CL:0000064;1.20e-14;3!CL:0000067;1.20e-14;3!CL:0005012;1.20e-14;3!CL:0002304;1.20e-14;3!CL:0002549;1.54e-10;2!CL:0000650;4.39e-10;2!CL:1000500;4.39e-10;2!CL:1000618;4.39e-10;2!CL:1001318;4.39e-10;2!CL:0002173;4.39e-10;2!CL:1000507;1.94e-07;10!CL:1000494;1.94e-07;10!CL:0000075;1.96e-07;27!CL:0002564;5.41e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,8.36e-15,3;CL:0000067,8.36e-15,3;CL:0005012,8.36e-15,3;CL:0002304,8.36e-15,3;CL:0002549,2.11e-10,2;CL:0000650,8.03e-10,2;CL:1000500,8.03e-10,2;CL:1000618,8.03e-10,2;CL:1001318,8.03e-10,2;CL:0002173,8.03e-10,2;CL:0000075,2.21e-07,27;CL:0002564,2.85e-07,3;CL:1000507,3.16e-07,10;CL:1000494,3.16e-07,10;CL:0000066,3.69e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0003918;6.00e-08;10!UBERON:0007687;6.00e-08;10 | |||
|ontology_enrichment_disease=DOID:0050687!4.53e-11!143;DOID:305!1.35e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!1.01e-14!347;UBERON:0000153!1.18e-12!129;UBERON:0007811!1.18e-12!129;UBERON:0003075!1.48e-12!86;UBERON:0007284!1.48e-12!86;UBERON:0004121!2.66e-12!169;UBERON:0000033!3.07e-12!123;UBERON:0002346!3.46e-12!90;UBERON:0000924!3.69e-12!173;UBERON:0006601!3.69e-12!173;UBERON:0000064!1.09e-11!219;UBERON:0003056!9.86e-10!61;UBERON:0000475!1.87e-08!365;UBERON:0000477!3.78e-08!286;UBERON:0000119!4.29e-08!312;UBERON:0000922!6.46e-08!612;UBERON:0000483!7.91e-08!309;UBERON:0002200!1.01e-07!11;UBERON:0006876!1.01e-07!11;UBERON:0000019!2.31e-07!19;UBERON:0000047!2.31e-07!19;UBERON:0004088!2.31e-07!19;UBERON:0003072!2.31e-07!19;UBERON:0003071!2.31e-07!19;UBERON:0004128!2.31e-07!19;UBERON:0000468!3.59e-07!659;UBERON:0000020!4.03e-07!23;UBERON:0002113!4.23e-07!27;UBERON:0003918!4.23e-07!27;UBERON:0005095!4.23e-07!27;UBERON:0007687!4.23e-07!27;UBERON:0002616!4.41e-07!59;UBERON:0000955!5.86e-07!69;UBERON:0006238!5.86e-07!69;UBERON:0001950!6.13e-07!20;UBERON:0000073!6.19e-07!94;UBERON:0001016!6.19e-07!94;UBERON:0005743!9.02e-07!86;UBERON:0001444!9.30e-07!48;UBERON:0000970!9.93e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0006876;5.42e-15;11!UBERON:0001778;1.20e-14;3!UBERON:0001775;1.20e-14;3!UBERON:0002203;7.69e-13;6!UBERON:0001768;7.69e-13;6!UBERON:0002200;7.69e-13;6!UBERON:0002113;2.72e-11;24!UBERON:0011143;2.72e-11;24!UBERON:0000488;4.15e-11;4!UBERON:0005629;1.54e-10;2!UBERON:0005358;1.54e-10;2!UBERON:0001886;1.54e-10;2!UBERON:0004086;1.54e-10;2!UBERON:0005282;1.54e-10;2!UBERON:0005281;1.54e-10;2!UBERON:0003567;4.39e-10;2!UBERON:0003838;4.39e-10;2!UBERON:0003586;4.39e-10;2!UBERON:0005169;4.39e-10;2!UBERON:0002321;4.39e-10;2!UBERON:0005215;4.39e-10;2!UBERON:0002303;4.39e-10;2!UBERON:0002319;4.39e-10;2!UBERON:0000489;4.00e-09;29!UBERON:0006554;8.88e-09;30!UBERON:0001008;8.88e-09;30!UBERON:0001801;3.58e-08;14!UBERON:0004211;1.94e-07;10!UBERON:0009773;1.94e-07;10!UBERON:0001231;1.94e-07;10!UBERON:0004810;1.94e-07;10!UBERON:0002242;5.41e-07;3!UBERON:0007625;6.78e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006876,5.29e-15,11;UBERON:0001778,8.36e-15,3;UBERON:0001775,8.36e-15,3;UBERON:0002203,6.09e-13,6;UBERON:0001768,6.09e-13,6;UBERON:0002200,6.09e-13,6;UBERON:0000488,3.18e-11,4;UBERON:0005629,2.11e-10,2;UBERON:0005358,2.11e-10,2;UBERON:0001886,2.11e-10,2;UBERON:0004086,2.11e-10,2;UBERON:0005282,2.11e-10,2;UBERON:0005281,2.11e-10,2;UBERON:0002113,2.92e-10,26;UBERON:0003918,2.92e-10,26;UBERON:0011143,2.92e-10,26;UBERON:0005095,2.92e-10,26;UBERON:0007687,2.92e-10,26;UBERON:0003567,8.03e-10,2;UBERON:0003838,8.03e-10,2;UBERON:0003586,8.03e-10,2;UBERON:0005169,8.03e-10,2;UBERON:0002321,8.03e-10,2;UBERON:0005215,8.03e-10,2;UBERON:0002303,8.03e-10,2;UBERON:0002319,8.03e-10,2;UBERON:0000489,2.11e-08,31;UBERON:0001801,3.49e-08,14;UBERON:0002242,2.85e-07,3;UBERON:0003068,2.85e-07,3;UBERON:0002328,2.85e-07,3;UBERON:0004880,2.85e-07,3;UBERON:0004810,3.16e-07,10;UBERON:0007625,6.60e-07,11 | |||
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| ||
|short_description=p@chr5:107007726..107007737,- | |short_description=p@chr5:107007726..107007737,- | ||
}} | }} |
Latest revision as of 08:31, 30 July 2015
Short description: | p@chr5:107007726..107007737, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:107007726..107007737, - |
Coexpression cluster: | C4447_mesothelioma_Wilms_leiomyoblastoma_large_endometrial_serous_merkel |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 8.36e-15 | 3 |
ciliated epithelial cell | 8.36e-15 | 3 |
multi-ciliated epithelial cell | 8.36e-15 | 3 |
non-pigmented ciliary epithelial cell | 8.36e-15 | 3 |
fibroblast of choroid plexus | 2.11e-10 | 2 |
mesangial cell | 8.03e-10 | 2 |
kidney interstitial cell | 8.03e-10 | 2 |
juxtaglomerular complex cell | 8.03e-10 | 2 |
renal interstitial pericyte | 8.03e-10 | 2 |
extraglomerular mesangial cell | 8.03e-10 | 2 |
columnar/cuboidal epithelial cell | 2.21e-07 | 27 |
nucleus pulposus cell of intervertebral disc | 2.85e-07 | 3 |
kidney tubule cell | 3.16e-07 | 10 |
nephron tubule epithelial cell | 3.16e-07 | 10 |
epithelial cell | 3.69e-07 | 253 |