FFCP PHASE1:Hg19::chr4:77917609..77917629,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:77917609..77917629,+ | |||
|description=CAGE_peak_at_chr4:77917609..77917629,+ | |||
|id=chr4:77917609..77917629,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.71e-16!180;CL:0000057!6.45e-12!75;CL:0002620!8.86e-09!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.06e-11;23!CL:0002334;3.36e-08;12!CL:0000135;6.56e-08;3!CL:0000388;6.56e-08;3!CL:0002504;2.17e-07;3!CL:1000279;2.17e-07;3!CL:0002580;2.17e-07;3!CL:1000280;2.17e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.42e-13,76;CL:0002620,9.65e-12,23;CL:0002334,6.62e-08,12;CL:0000135,7.53e-08,3;CL:0000388,7.53e-08,3;CL:0002504,3.44e-07,3;CL:1000279,3.44e-07,3;CL:1000280,3.44e-07,3;CL:0002580,3.83e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002097!4.33e-08!40;UBERON:0002199!8.91e-08!45;UBERON:0002416!8.91e-08!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;6.56e-08;3!UBERON:0000043;6.56e-08;3!UBERON:0007845;6.56e-08;3!UBERON:0002097;8.21e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.30e-09,41;UBERON:0007846,7.53e-08,3;UBERON:0000043,7.53e-08,3;UBERON:0007845,7.53e-08,3;UBERON:0002199,1.05e-07,46;UBERON:0002416,1.05e-07,46 | |||
|phase1_expression=0.726713517082227,2.99740733447376,0.845726424575827,1.0007329835313,0.893922188854576,2.61701557230111,0,0.631719873426831,0,0,0,0.218441372130172,0.527533956456907,0.495065411840187,0.662794751455832,0.672325146451775,1.20538905604795,1.46062018077475,0.487932798790507,0.246242116153576,0.204000691244253,0,0.572471974262113,0.684372125364421,1.25542639594803,0.229240217243854,0.0821005894499457,0,0,0,0.154816123316076,0.919421224478927,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0.645484683583826,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0,0,0.221533894583621,0,0.25618263945135,0.130059347559878,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0.639312809217652,0.361439152384566,1.00267582127178,1.01392563272577,0.795285947051099,0.486634870302636,0.189069634328136,1.55210578223795,0.790513071238134,0,0,0,0.324547393654683,0.174129737299267,0.398873881556595,0,0.571994910780128,0,0.39752481473341,0,0,0.56530794192401,0,0.550236083880135,0.417989933073621,0.258416759169329,0,0.33472061276467,0,0,0.732186172644509,0,0,0.267899184852239,0.22452937262617,0.225222960966644,0,0,0.549605231791222,0,0,0,1.49091585508596,0.506522046658319,0.397227542439656,0.286836620748814,0.709336764396714,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0,0.605429710579726,0.576175924479999,0.234321431833797,0.624320153660641,0,0.896692083310806,0.822041490506354,0.971237666208789,1.12360645361799,0.204154171254893,0.982674538494144,0.619954687054593,0,1.48360157567134,0,0.718618141816238,0.168336113954066,1.00094815897571,0,0,2.75839016219118,0.901428353439581,0.340296549480063,0.717558542755448,3.20336083227851,1.90738711043606,0.600182192168805,1.33968288009971,1.28820270022815,1.30281799432113,0.168776332241266,2.04617710838517,1.7670364197088,1.93304787148829,0.323292113637624,2.84007674013291,1.5112814734146,1.86516651541536,0.193260853163297,0,0.286804595389004,0.121973706129595,0.397589304964456,0.232387885739037,0.414644220061482,0,0.36497735907583,1.56449532329816,3.21620469096443,0,0.928735856063958,0.721879481669586,0.118306800039844,0.337169380156203,0.241011029883482,0.330881918197182,0,0.474541238222193,0,0,0,0,0,0,1.47008711385542,0,0,0,0.441463099414651,0.122988438543114,0,0.219500570817251,0,0.301586917234893,0.0925884451585296,0.325808305310325,0,1.44331342025273,0,1.05667824812239,0.144366447761074,0.925971025153221,0.570762456703795,0,0,0,0.234004265139238,0.148631162288728,0,0.671928512795438,0.283550194484773,0.268675568108545,0,0.383382679165211,0,0,0.621984346622316,0.288239906833923,0.37872730027914,0.190493682876507,0,0,1.71072446022705,0.205654985406647,0.901029173531752,0,0.112131084345361,0,0.95339771567235,0.517086863031111,0,0,1.06375246633948,0,0,0,0,0.57191197463259,0,0,0,0,3.16780749173372,0,0,0.599837947092342,0,0,0,0.718874566474748,4.59447743336456,0,1.73737568001095,1.02738161275192,0.895304816199478,0.112085143993527,0,0,0,0,0,0,0.335032530668698,1.27587750330633,0,0,0,0.24538298343828,1.00034104211935,1.08506009479894,1.45579603071565,7.85087550707512,2.68094105557689,1.52283839490527,0.601892199455438,0,0,0,0.553107505625109,1.04260337361699,0,0,0.206768026122887,0,0.106727557803444,0,0,0.604780586659361,1.24053903909388,1.07423381301644,2.24528075546459,1.02511319404561,0.511707249066704,2.73451665944133,1.48418066444991,0.771048469013278,0.355123450626254,0.164254312027618,1.03850885836724,0.348631135379878,0.241718899183244,0.200506470303285,0.368323955743585,0.803701137152247,0.728364672026868,1.04899531967539,0,0.616122696835318,0,1.46139224653261,0.422206515571503,0,0.170093705276516,1.51141141271498,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,1.00726411300178,0.247528499761764,0,0,0,0.580024309752732,0.462145851343933,0.614014698904518,0.551346289938122,0.429680979473094,0.435050081742686,0.255679882248303,0.178064071293475,0.330569830721956,0.192190067365106,0.127612712494584,0.10115778085555,1.85938219718914,0,0.6970372701606,0,0,0,0.18532421910392,0.858749320451947,0.744316738719335,0.316379424718726,0.571890581771475,0,1.71175595213568,0,0,1.2591072030832,2.74537029736055,1.06031162111118,0.202182481573316,3.17020642346017,0.421258456238981,0,0.731140468893853,0,0.409499734223957,1.41405431953713,0,0,0,0.438450885253763,0,2.62357900818653,0.202910376962704,0.6196469961995,0.563391205064483,0.430234056612155,0.88424136911809,0,0.354761064070598,0.422215270595328,0.987884678879706,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0.245040215981032,0,0,0.142283686696828,0,0,0,0,0.649243880549111,0,0,0,0,0.50787533340481,0.1605880751037,0.80719882876419,0,0,0,0.671028323677248,0.166849141711909,0,0.278406173895242,0,0.270455678475983,0,0,0,0.586032717087576,0,0,0,0.23874448473769,0,0,0.99414764776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| |||
|short_description=p@chr4:77917609..77917629,+ | |||
}} |
Latest revision as of 07:02, 30 July 2015
Short description: | p@chr4:77917609..77917629, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:77917609..77917629, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.42e-13 | 76 |
skin fibroblast | 9.65e-12 | 23 |
preadipocyte | 6.62e-08 | 12 |
fibrocyte | 7.53e-08 | 3 |
tendon cell | 7.53e-08 | 3 |
enteric smooth muscle cell | 3.44e-07 | 3 |
smooth muscle cell of large intestine | 3.44e-07 | 3 |
smooth muscle cell of colon | 3.44e-07 | 3 |
preadipocyte of the breast | 3.83e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 4.30e-09 | 41 |
dense regular connective tissue | 7.53e-08 | 3 |
tendon | 7.53e-08 | 3 |
regular connective tissue | 7.53e-08 | 3 |
integument | 1.05e-07 | 46 |
integumental system | 1.05e-07 | 46 |