FFCP PHASE1:Hg19::chr4:56814149..56814167,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:56814149..56814167,- | |||
|coexpression_cluster_id=C428 | |||
|description=CAGE_peak_at_chr4:56814149..56814167,- | |description=CAGE_peak_at_chr4:56814149..56814167,- | ||
|id=chr4:56814149..56814167,- | |id=chr4:56814149..56814167,- | ||
|ontology_enrichment_celltype=CL:0002139!1.28e-21!24;CL:0000115!6.28e-18!35;CL:0000071!2.62e-16!18;CL:0002546!2.62e-16!18;CL:0002078!3.77e-12!44;CL:0002087!2.87e-10!119;CL:0000213!4.63e-10!57;CL:0000215!4.63e-10!57;CL:0002031!5.43e-10!124;CL:0002057!4.15e-09!42;CL:1000413!6.00e-09!9;CL:0000738!1.99e-08!140;CL:0000860!8.52e-08!45;CL:0000236!5.23e-07!14;CL:0002032!5.64e-07!165;CL:0000837!5.64e-07!165;CL:0005020!7.19e-07!6;CL:0002138!7.19e-07!6;CL:0005022!7.19e-07!6 | |ontology_enrichment_celltype=CL:0002139!1.28e-21!24;CL:0000115!6.28e-18!35;CL:0000071!2.62e-16!18;CL:0002546!2.62e-16!18;CL:0002078!3.77e-12!44;CL:0002087!2.87e-10!119;CL:0000213!4.63e-10!57;CL:0000215!4.63e-10!57;CL:0002031!5.43e-10!124;CL:0002057!4.15e-09!42;CL:1000413!6.00e-09!9;CL:0000738!1.99e-08!140;CL:0000860!8.52e-08!45;CL:0000236!5.23e-07!14;CL:0002032!5.64e-07!165;CL:0000837!5.64e-07!165;CL:0005020!7.19e-07!6;CL:0002138!7.19e-07!6;CL:0005022!7.19e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;6.24e-54;24!CL:0000115;4.02e-42;36!CL:0000071;6.52e-40;18!CL:0002078;1.09e-25;45!CL:1000413;8.18e-21;9!CL:0000213;2.80e-17;58!CL:0000215;2.80e-17;58!CL:0002138;1.89e-15;6!CL:0000236;4.03e-15;13!CL:0002544;1.37e-14;6!CL:0002543;7.58e-14;6!CL:0002144;1.61e-08;3!CL:0002188;5.98e-08;5!CL:0000860;1.46e-07;33!CL:0002057;1.46e-07;33!CL:0002618;1.62e-07;3!CL:0000945;3.40e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.41e-54,24;CL:0000115,1.98e-50,36;CL:0000071,3.50e-40,18;CL:0002546,3.50e-40,18;CL:0002078,1.93e-38,45;CL:0000213,9.68e-28,58;CL:0000215,9.68e-28,58;CL:1000413,7.46e-21,9;CL:0005020,1.94e-15,6;CL:0002138,1.94e-15,6;CL:0005022,1.94e-15,6;CL:0002544,1.21e-14,6;CL:0002543,4.53e-14,6;CL:0000236,4.69e-14,14;CL:0000222,1.44e-10,121;CL:0002144,1.61e-08,3;CL:0002188,5.32e-08,5;CL:0000076,8.68e-08,63;CL:0002618,1.03e-07,3;CL:0000945,2.74e-07,24;CL:0000826,2.74e-07,24;CL:0002087,3.83e-07,115;CL:0000860,7.95e-07,42;CL:0002057,7.95e-07,42 | |||
|ontology_enrichment_development_v019=CL:0002546;6.52e-40;18!CL:0005022;1.89e-15;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.61e-16!69;UBERON:0001986!2.62e-16!18;UBERON:0004638!2.62e-16!18;UBERON:0004852!2.62e-16!18;UBERON:0003081!1.98e-15!216;UBERON:0001009!1.20e-14!113;UBERON:0004535!1.55e-14!110;UBERON:0001981!2.26e-13!60;UBERON:0007500!2.26e-13!60;UBERON:0004537!2.26e-13!60;UBERON:0006965!2.26e-13!60;UBERON:0004872!1.22e-12!84;UBERON:0002049!7.00e-12!79;UBERON:0007798!7.00e-12!79;UBERON:0000487!1.08e-11!22;UBERON:0002193!1.85e-10!112;UBERON:0006914!2.76e-09!25;UBERON:0003915!6.00e-09!9;UBERON:0004700!6.00e-09!9;UBERON:0001917!6.00e-09!9;UBERON:0001637!7.51e-08!42;UBERON:0003509!7.51e-08!42;UBERON:0004572!7.51e-08!42;UBERON:0002390!1.04e-07!102;UBERON:0003061!1.04e-07!102;UBERON:0003914!1.20e-07!118;UBERON:0002405!5.26e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.52e-40;18!UBERON:0001986;6.52e-40;18!UBERON:0004852;6.52e-40;18!UBERON:0000487;1.26e-31;22!UBERON:0006914;3.66e-27;25!UBERON:0003915;8.18e-21;9!UBERON:0004700;8.18e-21;9!UBERON:0001917;8.18e-21;9!UBERON:0000490;8.69e-18;33!UBERON:0000055;4.14e-12;65!UBERON:0001473;2.49e-11;8!UBERON:0004536;2.49e-11;8!UBERON:0006558;2.49e-11;8!UBERON:0001638;6.21e-09;9!UBERON:0003920;6.21e-09;9!UBERON:0004582;6.21e-09;9!UBERON:0002465;7.36e-09;10!UBERON:0010523;1.61e-08;3!UBERON:0001915;1.61e-08;3!UBERON:0001982;1.61e-08;3!UBERON:0007500;2.13e-08;56!UBERON:0001981;2.13e-08;56!UBERON:0004537;2.13e-08;56!UBERON:0002049;4.20e-08;75!UBERON:0007798;4.20e-08;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.50e-40,18;UBERON:0001986,3.50e-40,18;UBERON:0004852,3.50e-40,18;UBERON:0000487,7.62e-32,22;UBERON:0006914,2.37e-27,25;UBERON:0003915,7.46e-21,9;UBERON:0004700,7.46e-21,9;UBERON:0001917,7.46e-21,9;UBERON:0000055,3.85e-20,68;UBERON:0002049,1.73e-16,78;UBERON:0007798,1.73e-16,78;UBERON:0003081,1.18e-14,203;UBERON:0004535,3.27e-14,109;UBERON:0001009,1.38e-13,112;UBERON:0007500,1.56e-13,59;UBERON:0001981,1.56e-13,59;UBERON:0004537,1.56e-13,59;UBERON:0006965,1.56e-13,59;UBERON:0001473,2.54e-11,8;UBERON:0004536,2.54e-11,8;UBERON:0006558,2.54e-11,8;UBERON:0004872,1.29e-09,83;UBERON:0001638,4.47e-09,9;UBERON:0003920,4.47e-09,9;UBERON:0004582,4.47e-09,9;UBERON:0002465,7.48e-09,10;UBERON:0010523,1.61e-08,3;UBERON:0001915,1.61e-08,3;UBERON:0001982,1.61e-08,3;UBERON:0002193,3.23e-08,108;UBERON:0000926,1.90e-07,315;UBERON:0004120,1.90e-07,315;UBERON:0006603,1.90e-07,315;UBERON:0003914,2.55e-07,117;UBERON:0002405,2.96e-07,93 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,2.01697543935533,0.602694528023977,0.730310090387373,0.975865597581014,0,0,0,0,0,0.125542639594803,0.305653622991805,0.328402357799783,0.472264687882075,0.393364276848904,0,0,0,0,0,0.619737604642413,0.142169232487422,0.880801318004542,0,0.401088894940283,0.434021741431704,0.223915474239924,0,0,0,0,0,0.232429036905685,0.411167888021826,0,4.89077066947656,4.35473201099471,8.0403958162119,1.03423704220986,0,0,0.188242339542605,0,0.898893937780338,0.612167784741805,0.320929027076094,0.639337125799041,2.96866170168044,2.19410023383795,2.13112375266347,1.7412554317715,1.13477044938228,1.24564449799115,2.51248665256743,0.521482918420201,2.82345498116652,0.605399502633369,1.47311054395026,0.949387162322653,0.211255286311942,0.212604299965044,0.628975936525128,0,0.150176892841506,0.16072558669708,0,0.39783335439818,1.0959849225878,1.75996244461323,3.27683166757279,2.66852776159066,2.56038133539904,2.80277190925209,2.29900975981793,1.98313461835459,2.86216126360609,3.41527781465669,0.587237189370939,1.14681968437569,3.96513985737078,0.560508562981536,2.10707267820062,0.196709770113833,0.393010762749165,1.23360899399706,0.334372990781356,0.32592226663359,0,0,1.55974639639243,0,1.77227115666897,0.812411591295047,0.512365278902701,1.04047478047903,0.657751618414705,0.276350017785848,0.869409257205157,0.593146252648242,1.07016331235885,0,0.226618685395132,1.53288197440768,1.03088233644789,1.26509846009751,0,0.651083453856419,0,0.903450714466637,0.511946444617674,0,0.710331756132051,1.64225599384209,0,0,0.144824403882799,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0.238490624305342,0,0,6.55915944310127,7.74211135595512,5.55424802572151,2.82653970962005,7.1314904155684,4.40188867104108,2.71693456497854,16.2802558276677,20.2786769731425,30.459575761585,20.9471244896756,9.12326526862215,14.399661395342,11.3975554907219,8.91156142669936,6.51888016473782,1.79623498100936,3.71617885594963,6.13266549863533,3.79706263827252,4.946447086121,0,0,0,0,0.759783069987479,0.132409180813219,0.286836620748814,0,0,1.06748995729705,0.24666754841716,0.311211035399766,0.942974704487816,0.980771418680752,0,0,0,0,1.71141546463335,0.149448680551801,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0.453728732640084,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,1.73934767846967,0.818238361772504,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69077727312324,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,18.3345388656564,13.4265798647217,12.7470281997181,0.790204397959275,0,0.246217006087397,0.468008530278475,0.297262324577456,1.87467667973554,0.503946384596579,0.425325291727159,0,0,0.383382679165211,0,0.616339038092582,0.414656231081544,0,0.25248486685276,0.063497894292169,0.381988425558278,0,0,0,0.300343057843917,0.285826432630578,0.112131084345361,0,0.07333828582095,1.03417372606222,0,0,0.531876233169741,1.04007436911366,0,0,0,0,0,0,0.65147236858747,0.355391948742546,0,0.904318131178758,0,0.199945982364114,1.2162378064119,0,0,0,0,0,0,0,0.179060963239896,0,0.591092280605782,0,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0.413536052245775,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,7.96133688496276,2.89159298970077,3.67057057373637,4.62681758070868,0,0,0,0,0,0,0,0,0,0.325378394664303,0.824328093181778,0,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0.94443704049192,0,0,0.532306030317022,0,0,0.286249773483982,0,0,0,0,0,0.318203247925937,0.78494864019923,0.179872457583315,0,0,0.808729926293264,0,0.421258456238981,0,0.243713489631284,0,0,0.141405431953713,0,0,1.32687795048244,0.438450885253763,0,0,0.405820753925408,0.30982349809975,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,1.03558180854457,0,0,0,0,1.52234282769651,1.52927441428475,0,0.952927101831156,0.411362273086194,0,0.540031437238115,0.79312517629427,0,0,0,0.185803175125719,0,0,0,0,0.191505370132367,0.846694330895531,0,0.280797178113459,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,1.4098700508785,0,0.439524537815682,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0.828851746593443,0,0.102268682502155,0.246169610922139,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.60298219312704,0,0,0,0,0,0,0.307801034015188,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0.332423363800313,0,0,0,0,0.794682894901893,0,0,0,0,0,0,0.611030144933625,1.48260564340311,0.494255755786011,1.04421949505455,0,1.60515529459758,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0.330991955875499,0.313932918407225,0,0,0,0,0,0,0.17472666824203,0.51595809741485,0,0,0,0,0.617792886840502,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0.407712618220842,0,0,0,0.600420288709789,0.136905378891993,1.27746588066972,0,0,0.279282401272254,0,1.4357460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| ||
|short_description=p@chr4:56814149..56814167,- | |short_description=p@chr4:56814149..56814167,- | ||
}} | }} |
Latest revision as of 05:45, 30 July 2015
Short description: | p@chr4:56814149..56814167, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:56814149..56814167, - |
Coexpression cluster: | C428_Endothelial_Renal_Lymphatic_Hepatic_adipose_heart_breast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.41e-54 | 24 |
endothelial cell | 1.98e-50 | 36 |
blood vessel endothelial cell | 3.50e-40 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.50e-40 | 18 |
meso-epithelial cell | 1.93e-38 | 45 |
lining cell | 9.68e-28 | 58 |
barrier cell | 9.68e-28 | 58 |
endothelial cell of artery | 7.46e-21 | 9 |
lymphangioblast | 1.94e-15 | 6 |
endothelial cell of lymphatic vessel | 1.94e-15 | 6 |
vascular lymphangioblast | 1.94e-15 | 6 |
aortic endothelial cell | 1.21e-14 | 6 |
vein endothelial cell | 4.53e-14 | 6 |
B cell | 4.69e-14 | 14 |
mesodermal cell | 1.44e-10 | 121 |
capillary endothelial cell | 1.61e-08 | 3 |
glomerular endothelial cell | 5.32e-08 | 5 |
squamous epithelial cell | 8.68e-08 | 63 |
endothelial cell of umbilical vein | 1.03e-07 | 3 |
lymphocyte of B lineage | 2.74e-07 | 24 |
pro-B cell | 2.74e-07 | 24 |
nongranular leukocyte | 3.83e-07 | 115 |
classical monocyte | 7.95e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.95e-07 | 42 |