FFCP PHASE1:Hg19::chr4:41646481..41646524,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:41646481..41646524,+ | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_at_chr4:41646481..41646524,+ | |||
|id=chr4:41646481..41646524,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002586;1.65e-11;3!CL:0000149;9.91e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,2.12e-11,3;CL:0000149,1.19e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0006241;6.11e-11;3!UBERON:0003057;6.11e-11;3!UBERON:0006601;1.53e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.05e-36!94;UBERON:0001016!8.05e-36!94;UBERON:0005743!8.47e-35!86;UBERON:0001017!2.46e-31!82;UBERON:0001049!5.28e-29!57;UBERON:0005068!5.28e-29!57;UBERON:0006241!5.28e-29!57;UBERON:0007135!5.28e-29!57;UBERON:0003075!6.89e-29!86;UBERON:0007284!6.89e-29!86;UBERON:0002346!1.77e-27!90;UBERON:0002020!5.09e-26!34;UBERON:0003528!5.09e-26!34;UBERON:0001893!8.08e-26!34;UBERON:0002780!4.87e-25!41;UBERON:0001890!4.87e-25!41;UBERON:0006240!4.87e-25!41;UBERON:0002791!6.32e-25!33;UBERON:0001869!1.52e-24!32;UBERON:0003080!4.27e-24!42;UBERON:0003056!1.11e-23!61;UBERON:0002616!1.19e-23!59;UBERON:0000955!2.67e-23!69;UBERON:0006238!2.67e-23!69;UBERON:0002619!2.43e-21!22;UBERON:0000956!3.56e-21!25;UBERON:0000203!3.56e-21!25;UBERON:0004121!1.57e-20!169;UBERON:0000924!5.57e-20!173;UBERON:0006601!5.57e-20!173;UBERON:0001950!1.55e-19!20;UBERON:0007023!1.01e-17!115;UBERON:0000033!8.54e-15!123;UBERON:0000153!3.31e-14!129;UBERON:0007811!3.31e-14!129;UBERON:0000064!1.56e-12!219;UBERON:0000025!2.53e-09!194;UBERON:0000483!2.21e-08!309;UBERON:0000119!4.91e-08!312;UBERON:0000475!1.55e-07!365;UBERON:0000200!1.93e-07!6;UBERON:0001871!2.70e-07!7;UBERON:0000468!2.91e-07!659;UBERON:0000477!5.29e-07!286;UBERON:0002420!7.95e-07!9;UBERON:0007245!7.95e-07!9;UBERON:0010009!7.95e-07!9;UBERON:0010011!7.95e-07!9;UBERON:0000454!7.95e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;9.55e-64;22!UBERON:0001950;1.40e-57;20!UBERON:0000956;9.85e-56;25!UBERON:0000203;9.85e-56;25!UBERON:0001869;4.73e-54;32!UBERON:0002791;3.03e-50;32!UBERON:0003528;3.63e-49;34!UBERON:0002020;3.63e-49;34!UBERON:0001893;1.36e-48;34!UBERON:0002780;8.45e-36;41!UBERON:0001890;8.45e-36;41!UBERON:0000073;1.64e-22;53!UBERON:0002616;1.64e-22;53!UBERON:0000200;3.23e-21;6!UBERON:0001017;1.03e-19;75!UBERON:0001871;8.93e-19;6!UBERON:0000349;1.12e-17;5!UBERON:0001872;1.16e-17;5!UBERON:0001016;1.25e-17;83!UBERON:0000955;1.43e-14;68!UBERON:0001870;8.71e-12;3!UBERON:0002021;1.60e-11;5!UBERON:0000966;1.65e-11;5!UBERON:0005388;1.65e-11;5!UBERON:0001802;1.65e-11;5!UBERON:0001781;1.65e-11;3!UBERON:0001782;1.65e-11;3!UBERON:0002240;6.11e-11;3!UBERON:0005174;6.11e-11;3!UBERON:0001137;6.11e-11;3!UBERON:0002420;1.64e-09;9!UBERON:0007245;1.64e-09;9!UBERON:0010009;1.64e-09;9!UBERON:0010011;1.64e-09;9!UBERON:0000454;1.64e-09;9!UBERON:0001876;8.71e-09;2!UBERON:0002771;1.28e-08;2!UBERON:0002702;1.33e-08;2!UBERON:0011216;4.08e-08;132!UBERON:0000369;7.27e-08;4!UBERON:0002435;7.27e-08;4!UBERON:0000204;7.27e-08;4!UBERON:0001954;9.56e-08;2!UBERON:0003022;9.56e-08;2!UBERON:0002421;9.56e-08;2!UBERON:0002600;9.56e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,5.29e-64,22;UBERON:0001869,6.11e-61,32;UBERON:0001950,6.95e-58,20;UBERON:0003528,4.41e-57,34;UBERON:0002020,4.41e-57,34;UBERON:0001893,4.52e-57,34;UBERON:0002791,4.38e-56,32;UBERON:0000956,5.86e-56,25;UBERON:0000203,5.86e-56,25;UBERON:0002780,1.70e-50,41;UBERON:0001890,1.70e-50,41;UBERON:0003080,1.70e-50,41;UBERON:0006240,1.70e-50,41;UBERON:0001049,4.06e-48,56;UBERON:0005068,4.06e-48,56;UBERON:0006241,4.06e-48,56;UBERON:0007135,4.06e-48,56;UBERON:0001017,1.66e-46,81;UBERON:0001016,1.76e-46,89;UBERON:0003056,1.12e-43,61;UBERON:0000073,7.38e-41,53;UBERON:0002616,7.38e-41,53;UBERON:0003075,1.66e-40,82;UBERON:0007284,1.66e-40,82;UBERON:0002346,3.05e-38,86;UBERON:0000955,3.23e-35,68;UBERON:0006238,3.23e-35,68;UBERON:0010371,3.44e-30,104;UBERON:0004121,6.88e-26,171;UBERON:0000924,6.88e-26,171;UBERON:0006601,6.88e-26,171;UBERON:0010314,1.07e-23,132;UBERON:0000200,2.63e-21,6;UBERON:0001871,8.07e-19,6;UBERON:0007023,2.34e-18,114;UBERON:0000349,8.36e-18,5;UBERON:0001872,8.66e-18,5;UBERON:0011216,1.90e-17,223;UBERON:0001870,9.06e-12,3;UBERON:0002021,1.24e-11,5;UBERON:0001782,2.12e-11,3;UBERON:0005424,2.12e-11,3;UBERON:0002240,5.82e-11,3;UBERON:0005174,5.82e-11,3;UBERON:0001137,5.82e-11,3;UBERON:0000025,1.39e-10,192;UBERON:0002420,1.50e-09,9;UBERON:0007245,1.50e-09,9;UBERON:0010009,1.50e-09,9;UBERON:0010011,1.50e-09,9;UBERON:0000454,1.50e-09,9;UBERON:0000966,2.05e-09,6;UBERON:0005388,2.05e-09,6;UBERON:0001802,2.05e-09,6;UBERON:0001876,8.57e-09,2;UBERON:0001781,1.19e-08,4;UBERON:0002771,1.33e-08,2;UBERON:0002702,1.33e-08,2;UBERON:0000369,6.52e-08,4;UBERON:0002435,6.52e-08,4;UBERON:0000204,6.52e-08,4;UBERON:0010082,6.52e-08,4;UBERON:0001954,1.08e-07,2;UBERON:0003022,1.08e-07,2;UBERON:0002421,1.08e-07,2;UBERON:0002600,1.08e-07,2;UBERON:0000483,2.65e-07,306;UBERON:0000119,3.76e-07,309;UBERON:0004111,5.07e-07,240 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0.218441372130172,0,0,0,0,0.602694528023977,0,0,0.123121058076788,0,0.313454721478088,0,0.410623275218653,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.767175371061182,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.538168907066586,0,0.423863802319124,0,0,0,0,0.168776332241266,0,0,0,0,0,0.201504196455281,0,0,0,0,0.487894824518382,0.662648841607426,0.580969714347592,0.207322110030741,1.00928340350251,1.45990943630332,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.330881918197182,0.435758888184812,0.237270619111097,0,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0,0,0.122988438543114,0.514703430895577,0,0,0,0.0925884451585296,0,0,0,0.695582429850461,0.587043471179108,0,0,0.190254152234598,0,0,0,0.468008530278475,0.297262324577456,0,0.16798212819886,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.857867961948885,0,0,0,1.42156779497018,0.791951872933429,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,2.60279707715243,2.31986643833309,3.01529277601828,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0.604780586659361,0.248107807818777,0.920771839728375,0.280660094433074,0.384417447767103,0.511707249066704,0.804269605718038,0,0,0,0,0,0,0,0,0.0920809889358963,0.114814448164607,0,0,0,0,0.784349769176855,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,1.02580050046556,3.28014645699706,10.0867302345934,0.721287081534056,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,1.69160867728801,0,0.192190067365106,0,0.4046311234222,0,0.31481234683064,0,0,0,0,0,0.572499546967965,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0.54907405947211,0.117812402345686,0,0,0,0,1.21856744815642,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637705090915289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99921590399346,0,0,0.146508179271894,0,0,0,0.71623345421307,0.296964680832639,0,9.94147647766298,7.17414023693615,0.222617410045812,0,0,0,0,0,0.20453736500431,0,0,0.0898683511473268,0.537063524026827,0,0,0,1.11136990144637,0.969332746095218,2.41197055220813,0,0,0,0,0.1137934482855,0.254253650292766,0.236387681767936,0,0.291604613383254,0.173624994933292,0,1.32656082487949,0,0.110579259931225,0,3.07139556015562,0,0,0,0.113942055847001,0,0.0897576444097721,0,0.638002319463839,0,2.66517388009317,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0.995261931078505,0,1.22206028986725,0,0,0,0.404406797884062,0.802577647298789,0.234264445725339,0,0,0,0,0,6.1214552326098,0.442306057399416,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0.483781656445426,0.219267951258557,0.0821154570532092,0.0969890164884194,0,2.71176888936639,0,0.19871461170299,2.46912104227927,0,0.160317640503067,0,0.19980960958213,0.144090417154106,0,0,0,0,0.235694034616795,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0.558564802544508,0.687481272035051,0,0.399358000997982,0.429226048136571,0.223171457441873,0.134366944973453,0.360299883542404,0,0,0,0,0,0,1.59045937961861,2.17925449778521,0.964518890790115,0.137539436597234,0.415440338029185,0.449947783103001,0,2.49073182297901,0,0,0.786818822024972,0,0.35857467866569,0,0,0.662091970365432,0,0,0,0,0,0.656740165994712,0,0.113312091520126,0,0,1.68067843270016,0.66116300871345,0,0,0.213574825135389,0.943225830597996,0,0,0,0,0,0.544017803369474,0.5013797880454,0.612691153526923,0,0,7.08854543973589,4.51497180137264,3.1297732676625,0.573409195690071,0.776503360757966,0.931446044120752,32.2352319401418,0,0,0.285465333544967,0,0.468334905806882,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04397716786085,0,0,0.244736704506468,0,0.308801447160972,0,0,0,0,1.79369063011563,0,0,4.70078682915885,0.194860308839388,0,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0,0,2.48830904013189,3.7089367678059,0,0.629063767423586,0.873677105536111,0,0.212574920101683,0,2.23457967189298,0.318004350653419,0,0,0,0,1.92687675289379,2.8339315265117,1.11743701340006,2.66651273512982,4.78936222821264,0.899044282034833,3.22951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,1.62090203084147,3.12431239445539,3.10030194751776,1.77564268542939,6.01672289920042,0,0,0,0,0.535701835878287,0,0,0,0.443511850813194,0,0,0.135939465953663,1.44700101838268,0.236387681767936,0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| |||
|short_description=p@chr4:41646481..41646524,+ | |||
}} |
Latest revision as of 05:16, 30 July 2015
Short description: | p@chr4:41646481..41646524, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:41646481..41646524, + |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 2.12e-11 | 3 |
visual pigment cell | 1.19e-08 | 4 |