FFCP PHASE1:Hg19::chr4:21115074..21115079,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:21115074..21115079,- | |||
|coexpression_cluster_id=C670 | |||
|description=CAGE_peak_at_chr4:21115074..21115079,- | |description=CAGE_peak_at_chr4:21115074..21115079,- | ||
|id=chr4:21115074..21115079,- | |id=chr4:21115074..21115079,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.06e-20;3!UBERON:0006601;1.22e-10;82!UBERON:0003056;2.62e-09;3!UBERON:0005425;1.35e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.79e-85!57;UBERON:0005068!2.79e-85!57;UBERON:0006241!2.79e-85!57;UBERON:0007135!2.79e-85!57;UBERON:0002616!3.20e-78!59;UBERON:0000955!4.86e-77!69;UBERON:0006238!4.86e-77!69;UBERON:0002780!5.03e-74!41;UBERON:0001890!5.03e-74!41;UBERON:0006240!5.03e-74!41;UBERON:0003080!4.88e-72!42;UBERON:0001017!9.11e-72!82;UBERON:0005743!1.91e-70!86;UBERON:0000073!7.33e-68!94;UBERON:0001016!7.33e-68!94;UBERON:0003075!1.91e-62!86;UBERON:0007284!1.91e-62!86;UBERON:0002020!4.50e-62!34;UBERON:0003528!4.50e-62!34;UBERON:0001893!5.02e-62!34;UBERON:0002791!1.03e-59!33;UBERON:0002346!4.64e-59!90;UBERON:0001869!2.08e-58!32;UBERON:0003056!8.46e-55!61;UBERON:0007023!1.28e-43!115;UBERON:0000033!4.71e-43!123;UBERON:0000956!2.20e-42!25;UBERON:0000203!2.20e-42!25;UBERON:0000153!3.01e-42!129;UBERON:0007811!3.01e-42!129;UBERON:0002619!2.31e-40!22;UBERON:0001950!2.94e-40!20;UBERON:0004121!6.58e-33!169;UBERON:0000924!8.23e-32!173;UBERON:0006601!8.23e-32!173;UBERON:0002420!1.10e-21!9;UBERON:0007245!1.10e-21!9;UBERON:0010009!1.10e-21!9;UBERON:0010011!1.10e-21!9;UBERON:0000454!1.10e-21!9;UBERON:0002308!4.92e-21!9;UBERON:0000125!4.92e-21!9;UBERON:0000025!6.19e-18!194;UBERON:0004732!2.48e-17!13;UBERON:0009663!4.30e-17!7;UBERON:0000200!2.61e-15!6;UBERON:0004733!3.14e-15!12;UBERON:0002028!3.14e-15!12;UBERON:0007277!3.14e-15!12;UBERON:0001871!3.74e-15!7;UBERON:0003076!1.27e-14!15;UBERON:0003057!1.27e-14!15;UBERON:0004111!1.68e-13!241;UBERON:0002298!1.77e-13!8;UBERON:0001894!5.35e-13!7;UBERON:0006222!5.35e-13!7;UBERON:0000064!1.53e-12!219;UBERON:0001872!1.71e-12!5;UBERON:0000369!4.41e-11!4;UBERON:0002435!4.41e-11!4;UBERON:0000204!4.41e-11!4;UBERON:0010082!4.41e-11!4;UBERON:0003296!7.85e-11!4;UBERON:0010133!7.85e-11!4;UBERON:0000483!9.44e-11!309;UBERON:0000477!1.01e-10!286;UBERON:0000119!1.61e-10!312;UBERON:0002680!9.56e-10!9;UBERON:0001895!9.56e-10!9;UBERON:0010092!9.56e-10!9;UBERON:0002021!5.35e-09!5;UBERON:0000475!8.23e-09!365;UBERON:0005383!1.01e-08!3;UBERON:0005382!1.01e-08!3;UBERON:0000349!1.18e-08!5;UBERON:0002771!1.27e-08!3;UBERON:0000988!7.61e-08!3;UBERON:0001896!1.31e-07!3;UBERON:0005290!1.31e-07!3;UBERON:0010096!1.31e-07!3;UBERON:0006331!2.08e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;8.26e-37;32!UBERON:0002780;1.30e-36;41!UBERON:0001890;1.30e-36;41!UBERON:0000073;3.38e-34;53!UBERON:0002616;3.38e-34;53!UBERON:0002791;1.39e-33;32!UBERON:0001893;5.03e-32;34!UBERON:0001950;7.67e-30;20!UBERON:0003528;2.01e-28;34!UBERON:0002020;2.01e-28;34!UBERON:0002619;4.25e-27;22!UBERON:0000955;1.05e-25;68!UBERON:0000956;9.00e-24;25!UBERON:0000203;9.00e-24;25!UBERON:0001017;9.59e-22;75!UBERON:0001870;5.00e-20;3!UBERON:0001016;2.04e-18;83!UBERON:0002420;5.95e-18;9!UBERON:0007245;5.95e-18;9!UBERON:0010009;5.95e-18;9!UBERON:0010011;5.95e-18;9!UBERON:0000454;5.95e-18;9!UBERON:0000200;2.42e-17;6!UBERON:0003296;1.43e-15;4!UBERON:0010133;1.43e-15;4!UBERON:0002784;1.43e-15;4!UBERON:0000369;2.06e-15;4!UBERON:0002435;2.06e-15;4!UBERON:0000204;2.06e-15;4!UBERON:0001894;3.39e-15;7!UBERON:0009663;4.46e-15;7!UBERON:0001905;1.03e-14;2!UBERON:0002757;1.03e-14;2!UBERON:0010134;1.03e-14;2!UBERON:0005408;1.03e-14;2!UBERON:0001899;1.03e-14;2!UBERON:0002702;7.79e-14;2!UBERON:0002021;5.86e-13;5!UBERON:0004732;3.25e-12;13!UBERON:0000125;9.17e-12;9!UBERON:0002308;9.17e-12;9!UBERON:0002680;1.03e-11;9!UBERON:0001895;1.03e-11;9!UBERON:0011216;7.91e-11;132!UBERON:0007023;9.77e-11;114!UBERON:0002037;2.16e-10;6!UBERON:0005383;9.71e-10;3!UBERON:0005382;9.71e-10;3!UBERON:0004733;8.09e-09;12!UBERON:0002028;8.09e-09;12!UBERON:0003112;3.80e-08;1!UBERON:0011158;3.80e-08;1!UBERON:0003128;3.80e-08;1!UBERON:0001703;3.80e-08;1!UBERON:0002241;3.80e-08;1!UBERON:0001882;6.30e-08;1!UBERON:0002022;6.30e-08;1!UBERON:0001874;6.30e-08;1!UBERON:0005403;6.30e-08;1!UBERON:0005795;1.35e-07;1!UBERON:0000941;1.35e-07;1!UBERON:0001785;1.35e-07;1!UBERON:0002464;1.35e-07;1!UBERON:0004904;1.35e-07;1!UBERON:0001021;1.35e-07;1!UBERON:0007190;1.35e-07;1!UBERON:0010314;4.54e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.40e-59,53;UBERON:0002616,2.40e-59,53;UBERON:0001049,5.42e-56,56;UBERON:0005068,5.42e-56,56;UBERON:0006241,5.42e-56,56;UBERON:0007135,5.42e-56,56;UBERON:0000955,2.38e-53,68;UBERON:0006238,2.38e-53,68;UBERON:0002780,2.65e-52,41;UBERON:0001890,2.65e-52,41;UBERON:0003080,2.65e-52,41;UBERON:0006240,2.65e-52,41;UBERON:0001017,3.84e-48,81;UBERON:0001016,1.47e-46,89;UBERON:0003075,3.08e-44,82;UBERON:0007284,3.08e-44,82;UBERON:0003056,4.03e-42,61;UBERON:0002346,5.44e-42,86;UBERON:0001869,1.53e-41,32;UBERON:0001893,5.34e-39,34;UBERON:0002791,3.36e-36,32;UBERON:0010371,5.41e-34,104;UBERON:0003528,5.66e-34,34;UBERON:0002020,5.66e-34,34;UBERON:0001950,8.84e-30,20;UBERON:0007023,2.39e-28,114;UBERON:0010314,2.62e-28,132;UBERON:0002619,4.84e-27,22;UBERON:0000956,1.01e-23,25;UBERON:0000203,1.01e-23,25;UBERON:0004121,2.56e-22,171;UBERON:0000924,2.56e-22,171;UBERON:0006601,2.56e-22,171;UBERON:0001870,4.70e-20,3;UBERON:0011216,4.18e-19,223;UBERON:0002420,6.63e-18,9;UBERON:0007245,6.63e-18,9;UBERON:0010009,6.63e-18,9;UBERON:0010011,6.63e-18,9;UBERON:0000454,6.63e-18,9;UBERON:0000200,2.23e-17,6;UBERON:0002784,1.17e-15,4;UBERON:0003296,1.50e-15,4;UBERON:0010133,1.50e-15,4;UBERON:0000369,1.92e-15,4;UBERON:0002435,1.92e-15,4;UBERON:0000204,1.92e-15,4;UBERON:0010082,1.92e-15,4;UBERON:0001894,3.27e-15,7;UBERON:0006222,3.27e-15,7;UBERON:0009663,4.89e-15,7;UBERON:0001905,9.02e-15,2;UBERON:0002757,9.02e-15,2;UBERON:0010134,9.02e-15,2;UBERON:0005408,9.02e-15,2;UBERON:0001899,9.02e-15,2;UBERON:0002702,6.20e-14,2;UBERON:0000025,2.25e-13,192;UBERON:0002021,6.35e-13,5;UBERON:0004732,3.46e-12,13;UBERON:0000125,9.85e-12,9;UBERON:0002308,9.85e-12,9;UBERON:0002680,1.10e-11,9;UBERON:0001895,1.10e-11,9;UBERON:0010092,1.10e-11,9;UBERON:0002037,1.93e-10,6;UBERON:0006215,1.93e-10,6;UBERON:0005383,7.47e-10,3;UBERON:0005382,7.47e-10,3;UBERON:0004111,8.37e-10,240;UBERON:0004733,8.52e-09,12;UBERON:0002028,8.52e-09,12;UBERON:0007277,8.52e-09,12;UBERON:0000483,1.84e-08,306;UBERON:0000119,2.48e-08,309;UBERON:0003112,3.55e-08,1;UBERON:0011158,3.55e-08,1;UBERON:0003128,3.55e-08,1;UBERON:0001703,3.55e-08,1;UBERON:0002241,3.55e-08,1;UBERON:0004761,3.55e-08,1;UBERON:0009617,3.55e-08,1;UBERON:0001874,4.66e-08,1;UBERON:0002022,7.97e-08,1;UBERON:0001882,8.51e-08,1;UBERON:0005403,8.51e-08,1;UBERON:0000941,1.35e-07,1;UBERON:0001785,1.35e-07,1;UBERON:0002464,1.35e-07,1;UBERON:0004904,1.35e-07,1;UBERON:0001021,1.35e-07,1;UBERON:0003902,1.35e-07,1;UBERON:0005425,1.35e-07,1;UBERON:0007190,1.54e-07,1;UBERON:0003076,4.68e-07,15;UBERON:0003057,4.68e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85870796139317,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91381625495949,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,2.39138007897872,0,0,0,0,0,0,1.73856760253663,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0.173624994933292,0.885741385813839,2.65312164975897,1.52581736317083,3.09621927807429,2.95547618953547,0.438770794307945,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0.296521128680622,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21587785845575,0,0,0,0,0,0,0,1.1524383839052,0,0,0,0,0,0.577901179803038,1.20084057741958,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953423842781029,0,0,0,0,0,2.18698403968889,0,0.788057072991982,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.39669780522807,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,1.77213635993397,0.854183854313742,2.253436752717,0.573409195690071,0.332787154610557,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48865185073115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,2.11956442818316,7.08482881627925,3.03304332208587,4.92279274177812,0,0.622415272177961,3.22951291263702,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2156765231311,0.781078098613847,3.10030194751776,0.824405532520789,0.546974809018219,0,0,0,0,3.74991285114801,6.38939072215766,1.21393120847326,0.227662191351298,0,0.115233987555779,0,1.01954599465248,0.789273282754189,0,0,0,2.98519620840404,0,2.73947616152849,0,0,0.0714765441766563,1.73814972905999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.815897882290976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.930896962757057,0,0.476128862927481,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,1.22068853494722,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85870796139317,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91381625495949,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,2.39138007897872,0,0,0,0,0,0,1.73856760253663,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0.173624994933292,0.885741385813839,2.65312164975897,1.52581736317083,3.09621927807429,2.95547618953547,0.438770794307945,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0.296521128680622,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21587785845575,0,0,0,0,0,0,0,1.1524383839052,0,0,0,0,0,0.577901179803038,1.20084057741958,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953423842781029,0,0,0,0,0,2.18698403968889,0,0.788057072991982,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.39669780522807,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,1.77213635993397,0.854183854313742,2.253436752717,0.573409195690071,0.332787154610557,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48865185073115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,2.11956442818316,7.08482881627925,3.03304332208587,4.92279274177812,0,0.622415272177961,3.22951291263702,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2156765231311,0.781078098613847,3.10030194751776,0.824405532520789,0.546974809018219,0,0,0,0,3.74991285114801,6.38939072215766,1.21393120847326,0.227662191351298,0,0.115233987555779,0,1.01954599465248,0.789273282754189,0,0,0,2.98519620840404,0,2.73947616152849,0,0,0.0714765441766563,1.73814972905999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.815897882290976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.930896962757057,0,0.476128862927481,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,1.22068853494722,0,0,0 | ||
|short_description=p@chr4:21115074..21115079,- | |short_description=p@chr4:21115074..21115079,- | ||
}} | }} |
Latest revision as of 04:19, 30 July 2015
Short description: | p@chr4:21115074..21115079, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:21115074..21115079, - |
Coexpression cluster: | C670_putamen_parietal_pineal_caudate_middle_occipital_cerebellum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data