FFCP PHASE1:Hg19::chr4:145580790..145580817,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:145580790..145580817,+ | |||
|coexpression_cluster_id=C386 | |||
|description=CAGE_peak_at_chr4:145580790..145580817,+ | |description=CAGE_peak_at_chr4:145580790..145580817,+ | ||
|id=chr4:145580790..145580817,+ | |id=chr4:145580790..145580817,+ | ||
|ontology_enrichment_celltype=CL:0002139!6.03e-12!24;CL:0000071!2.06e-09!18;CL:0002546!2.06e-09!18;CL:1000413!3.02e-09!9;CL:0002544!3.09e-08!6;CL:0000115!8.57e-08!35;CL:0002603!3.42e-07!3 | |ontology_enrichment_celltype=CL:0002139!6.03e-12!24;CL:0000071!2.06e-09!18;CL:0002546!2.06e-09!18;CL:1000413!3.02e-09!9;CL:0002544!3.09e-08!6;CL:0000115!8.57e-08!35;CL:0002603!3.42e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002544;2.81e-17;6!CL:1000413;7.27e-12;9!CL:0000084;1.18e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002544,2.81e-17,6;CL:1000413,7.27e-12,9;CL:0000084,1.20e-09,25;CL:0000827,1.20e-09,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.15e-08,51;DOID:0060083,3.15e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0001986!2.06e-09!18;UBERON:0004638!2.06e-09!18;UBERON:0004852!2.06e-09!18;UBERON:0003915!3.02e-09!9;UBERON:0004700!3.02e-09!9;UBERON:0001917!3.02e-09!9;UBERON:0000025!1.24e-08!194;UBERON:0000055!9.30e-08!69;UBERON:0002049!1.15e-07!79;UBERON:0007798!1.15e-07!79;UBERON:0000477!1.17e-07!286;UBERON:0000487!1.39e-07!22;UBERON:0001049!1.41e-07!57;UBERON:0005068!1.41e-07!57;UBERON:0006241!1.41e-07!57;UBERON:0007135!1.41e-07!57;UBERON:0004111!1.67e-07!241;UBERON:0002616!2.93e-07!59 | |ontology_enrichment_uberon=UBERON:0001986!2.06e-09!18;UBERON:0004638!2.06e-09!18;UBERON:0004852!2.06e-09!18;UBERON:0003915!3.02e-09!9;UBERON:0004700!3.02e-09!9;UBERON:0001917!3.02e-09!9;UBERON:0000025!1.24e-08!194;UBERON:0000055!9.30e-08!69;UBERON:0002049!1.15e-07!79;UBERON:0007798!1.15e-07!79;UBERON:0000477!1.17e-07!286;UBERON:0000487!1.39e-07!22;UBERON:0001049!1.41e-07!57;UBERON:0005068!1.41e-07!57;UBERON:0006241!1.41e-07!57;UBERON:0007135!1.41e-07!57;UBERON:0004111!1.67e-07!241;UBERON:0002616!2.93e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.66e-50;2!UBERON:0005058;1.66e-50;2!UBERON:0009113;1.66e-50;2!UBERON:0004177;6.32e-21;5!UBERON:0005057;6.32e-21;5!UBERON:0003915;7.27e-12;9!UBERON:0004700;7.27e-12;9!UBERON:0001917;7.27e-12;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.73e-26,4;UBERON:0005058,6.73e-26,4;UBERON:0009113,6.73e-26,4;UBERON:0003295,6.73e-26,4;UBERON:0005562,6.73e-26,4;UBERON:0003351,1.22e-17,6;UBERON:0004177,2.85e-15,7;UBERON:0005057,2.85e-15,7;UBERON:0003915,7.27e-12,9;UBERON:0004700,7.27e-12,9;UBERON:0001917,7.27e-12,9;UBERON:0000974,5.41e-11,10;UBERON:0003408,5.41e-11,10;UBERON:0001042,5.41e-11,10;UBERON:0009145,5.41e-11,10;UBERON:0006562,4.42e-10,11;UBERON:0009722,4.42e-10,11;UBERON:0007690,4.42e-10,11 | |||
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|short_description=p@chr4:145580790..145580817,+ | |short_description=p@chr4:145580790..145580817,+ | ||
}} | }} |
Latest revision as of 02:01, 30 July 2015
Short description: | p@chr4:145580790..145580817, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:145580790..145580817, + |
Coexpression cluster: | C386_chronic_acute_Hodgkin_NK_thymus_liver_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic endothelial cell | 2.81e-17 | 6 |
endothelial cell of artery | 7.27e-12 | 9 |
T cell | 1.20e-09 | 25 |
pro-T cell | 1.20e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 6.73e-26 | 4 |
hemolymphoid system gland | 6.73e-26 | 4 |
thymic region | 6.73e-26 | 4 |
pharyngeal gland | 6.73e-26 | 4 |
thymus primordium | 6.73e-26 | 4 |
pharyngeal epithelium | 1.22e-17 | 6 |
hemopoietic organ | 2.85e-15 | 7 |
immune organ | 2.85e-15 | 7 |
endothelial tube | 7.27e-12 | 9 |
arterial system endothelium | 7.27e-12 | 9 |
endothelium of artery | 7.27e-12 | 9 |
neck | 5.41e-11 | 10 |
gland of gut | 5.41e-11 | 10 |
chordate pharynx | 5.41e-11 | 10 |
pharyngeal region of foregut | 5.41e-11 | 10 |
pharynx | 4.42e-10 | 11 |
entire pharyngeal arch endoderm | 4.42e-10 | 11 |
early pharyngeal endoderm | 4.42e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.15e-08 | 51 |
immune system cancer | 3.15e-08 | 51 |