FFCP PHASE1:Hg19::chr4:127877921..127877928,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:127877921..127877928,- | |||
|coexpression_cluster_id=C112 | |coexpression_cluster_id=C112 | ||
|description=CAGE_peak_at_chr4:127877921..127877928,- | |description=CAGE_peak_at_chr4:127877921..127877928,- | ||
|id=chr4:127877921..127877928,- | |id=chr4:127877921..127877928,- | ||
|ontology_enrichment_celltype=CL:1000415!3.54e-14!2;CL:0000319!4.71e-08!1 | |ontology_enrichment_celltype=CL:1000415!3.54e-14!2;CL:0000319!4.71e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000054;1.64e-09;2!CL:0000137;1.64e-09;2!CL:0000092;1.64e-09;2!CL:0000763;8.36e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.46e-14,108;CL:0000049,2.46e-14,108;CL:0000054,1.86e-09,2;CL:0000137,1.86e-09,2;CL:0000092,1.86e-09,2;CL:0002032,2.27e-09,161;CL:0000837,2.27e-09,161;CL:0000037,6.05e-09,168;CL:0000988,1.91e-08,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!7.49e-31!8;DOID:8692!8.04e-25!31;DOID:1240!2.55e-19!39;DOID:2531!4.03e-17!51;DOID:0060083!4.03e-17!51;DOID:162!1.39e-08!235;DOID:14566!2.56e-08!239;DOID:0050686!3.16e-08!137;DOID:0060085!3.34e-08!1;DOID:3165!3.34e-08!1;DOID:0060121!3.34e-08!1;DOID:2438!3.34e-08!1;DOID:4418!3.34e-08!1;DOID:3030!4.71e-08!1;DOID:9119!7.59e-08!1 | |ontology_enrichment_disease=DOID:1036!7.49e-31!8;DOID:8692!8.04e-25!31;DOID:1240!2.55e-19!39;DOID:2531!4.03e-17!51;DOID:0060083!4.03e-17!51;DOID:162!1.39e-08!235;DOID:14566!2.56e-08!239;DOID:0050686!3.16e-08!137;DOID:0060085!3.34e-08!1;DOID:3165!3.34e-08!1;DOID:0060121!3.34e-08!1;DOID:2438!3.34e-08!1;DOID:4418!3.34e-08!1;DOID:3030!4.71e-08!1;DOID:9119!7.59e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.52e-73;8!DOID:8692;8.19e-42;31!DOID:1240;3.20e-28;39!DOID:2531;9.41e-23;51!DOID:0060083;9.41e-23;51!DOID:0060085;1.12e-17;1!DOID:3165;1.12e-17;1!DOID:0060121;1.12e-17;1!DOID:2438;1.12e-17;1!DOID:4418;1.12e-17;1!DOID:200;1.64e-09;2!DOID:4305;1.64e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.43e-73,8;DOID:8692,3.02e-42,31;DOID:1240,1.73e-33,39;DOID:2531,1.96e-31,51;DOID:0060083,1.96e-31,51;DOID:0060085,1.44e-17,1;DOID:3165,1.44e-17,1;DOID:0060121,1.44e-17,1;DOID:2438,1.44e-17,1;DOID:4418,1.44e-17,1;DOID:0050686,2.14e-16,137;DOID:200,1.86e-09,2;DOID:4305,1.86e-09,2;DOID:162,3.37e-09,235;DOID:14566,5.49e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0002110!9.38e-10!3;UBERON:0006242!9.38e-10!3;UBERON:0002294!4.95e-09!7;UBERON:0001173!4.95e-09!7;UBERON:0004912!4.95e-09!7;UBERON:0001282!6.63e-08!1;UBERON:0009842!6.63e-08!1;UBERON:0003704!6.63e-08!1;UBERON:0001171!6.63e-08!1;UBERON:0001172!6.63e-08!1 | |ontology_enrichment_uberon=UBERON:0002110!9.38e-10!3;UBERON:0006242!9.38e-10!3;UBERON:0002294!4.95e-09!7;UBERON:0001173!4.95e-09!7;UBERON:0004912!4.95e-09!7;UBERON:0001282!6.63e-08!1;UBERON:0009842!6.63e-08!1;UBERON:0003704!6.63e-08!1;UBERON:0001171!6.63e-08!1;UBERON:0001172!6.63e-08!1 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr4:127877921..127877928,- | |short_description=p@chr4:127877921..127877928,- | ||
}} | }} |
Latest revision as of 01:29, 30 July 2015
Short description: | p@chr4:127877921..127877928, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:127877921..127877928, - |
Coexpression cluster: | C112_gastric_pancreas_temporal_duodenum_small_extraskeletal_adrenal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.46e-14 | 108 |
common myeloid progenitor | 2.46e-14 | 108 |
bone matrix secreting cell | 1.86e-09 | 2 |
osteocyte | 1.86e-09 | 2 |
osteoclast | 1.86e-09 | 2 |
hematopoietic oligopotent progenitor cell | 2.27e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.27e-09 | 161 |
hematopoietic stem cell | 6.05e-09 | 168 |
hematopoietic cell | 1.91e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.43e-73 | 8 |
myeloid leukemia | 3.02e-42 | 31 |
leukemia | 1.73e-33 | 39 |
hematologic cancer | 1.96e-31 | 51 |
immune system cancer | 1.96e-31 | 51 |
organ system benign neoplasm | 1.44e-17 | 1 |
skin benign neoplasm | 1.44e-17 | 1 |
integumentary system benign neoplasm | 1.44e-17 | 1 |
dermis tumor | 1.44e-17 | 1 |
cutaneous fibrous histiocytoma | 1.44e-17 | 1 |
organ system cancer | 2.14e-16 | 137 |
giant cell tumor | 1.86e-09 | 2 |
bone giant cell tumor | 1.86e-09 | 2 |
cancer | 3.37e-09 | 235 |
disease of cellular proliferation | 5.49e-09 | 239 |