FFCP PHASE1:Hg19::chr4:120546882..120546885,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr4:120546882..120546885,- to FFCP PHASE1:Hg19::chr4:120546882..120546885,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:120546882..120546885,- | |||
|description=CAGE_peak_at_chr4:120546882..120546885,- | |||
|id=chr4:120546882..120546885,- | |||
|ontology_enrichment_celltype=CL:0002622!7.95e-10!3;CL:0002504!1.28e-09!3;CL:1000279!1.28e-09!3;CL:1000280!1.28e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0002622;2.40e-66;3!CL:0002363;7.14e-26;2!CL:0002504;9.45e-18;3!CL:1000279;9.45e-18;3!CL:1000280;9.45e-18;3!CL:0000499;3.78e-08;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,1.71e-66,3;CL:0002363,9.18e-26,2;CL:0000008,9.18e-26,2;CL:0002504,9.46e-18,3;CL:1000279,9.46e-18,3;CL:1000280,9.46e-18,3;CL:0000499,3.65e-08,28 | |||
|ontology_enrichment_development_v019=CL:0000008;7.14e-26;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002367!1.12e-11!11;UBERON:0010147!1.12e-11!11;UBERON:0009846!1.12e-11!11;UBERON:0003353!1.12e-11!11;UBERON:0004902!1.12e-11!11;UBERON:0003820!1.12e-11!11;UBERON:0009847!1.12e-11!11;UBERON:0003937!1.32e-10!12;UBERON:0005399!1.32e-10!12;UBERON:0000162!6.42e-09!14;UBERON:0001353!6.42e-09!14;UBERON:0000163!6.42e-09!14;UBERON:0006866!6.42e-09!14;UBERON:0000164!6.42e-09!14;UBERON:0000931!6.42e-09!14;UBERON:0004122!3.03e-08!15;UBERON:0001007!8.69e-07!155;UBERON:0001555!8.69e-07!155;UBERON:0007026!8.69e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0003566;7.14e-26;2!UBERON:0001777;7.14e-26;2!UBERON:0002367;4.69e-19;11!UBERON:0010147;4.69e-19;11!UBERON:0003937;1.44e-17;12!UBERON:0005399;1.44e-17;12!UBERON:0003891;1.13e-13;4!UBERON:0000964;1.13e-13;4!UBERON:0010409;1.13e-13;4!UBERON:0003101;4.33e-10;22!UBERON:0000079;4.33e-10;22!UBERON:0000077;2.06e-08;27!UBERON:0001155;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003566,9.18e-26,2;UBERON:0001777,9.18e-26,2;UBERON:0002367,4.28e-19,11;UBERON:0010147,4.28e-19,11;UBERON:0009846,4.28e-19,11;UBERON:0003353,4.28e-19,11;UBERON:0004902,4.28e-19,11;UBERON:0003820,4.28e-19,11;UBERON:0009847,4.28e-19,11;UBERON:0003937,1.33e-17,12;UBERON:0005399,1.33e-17,12;UBERON:0000162,2.95e-15,14;UBERON:0001353,2.95e-15,14;UBERON:0000163,2.95e-15,14;UBERON:0006866,2.95e-15,14;UBERON:0000164,2.95e-15,14;UBERON:0000931,2.95e-15,14;UBERON:0004122,2.58e-14,15;UBERON:0003891,1.29e-13,4;UBERON:0000964,1.29e-13,4;UBERON:0010409,1.29e-13,4;UBERON:0004348,1.29e-13,4;UBERON:0005427,1.29e-13,4;UBERON:0001046,1.55e-11,19;UBERON:0005157,2.17e-10,47;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22;UBERON:0003064,3.65e-08,28;UBERON:0000077,6.44e-08,29;UBERON:0001155,8.37e-07,9 | |||
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| ||
|short_description=p@chr4:120546882..120546885,- | |||
}} | }} |
Latest revision as of 01:18, 30 July 2015
Short description: | p@chr4:120546882..120546885, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:120546882..120546885, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 1.71e-66 | 3 |
keratocyte | 9.18e-26 | 2 |
migratory cranial neural crest cell | 9.18e-26 | 2 |
enteric smooth muscle cell | 9.46e-18 | 3 |
smooth muscle cell of large intestine | 9.46e-18 | 3 |
smooth muscle cell of colon | 9.46e-18 | 3 |
stromal cell | 3.65e-08 | 28 |
Ontology term | p-value | n |
---|---|---|
head connective tissue | 9.18e-26 | 2 |
substantia propria of cornea | 9.18e-26 | 2 |
prostate gland | 4.28e-19 | 11 |
male accessory sex gland | 4.28e-19 | 11 |
embryonic cloacal epithelium | 4.28e-19 | 11 |
epithelium of hindgut | 4.28e-19 | 11 |
urogenital sinus epithelium | 4.28e-19 | 11 |
prostate bud | 4.28e-19 | 11 |
prostate field | 4.28e-19 | 11 |
sex gland | 1.33e-17 | 12 |
male reproductive gland | 1.33e-17 | 12 |
cloaca | 2.95e-15 | 14 |
anal region | 2.95e-15 | 14 |
embryonic cloaca | 2.95e-15 | 14 |
terminal part of digestive tract | 2.95e-15 | 14 |
primitive urogenital sinus | 2.95e-15 | 14 |
proctodeum | 2.95e-15 | 14 |
genitourinary system | 2.58e-14 | 15 |
stroma | 1.29e-13 | 4 |
cornea | 1.29e-13 | 4 |
eye surface | 1.29e-13 | 4 |
optic eminence | 1.29e-13 | 4 |
corneal primordium | 1.29e-13 | 4 |
hindgut | 1.55e-11 | 19 |
epithelial fold | 2.17e-10 | 47 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
intermediate mesoderm | 3.65e-08 | 28 |
mixed endoderm/mesoderm-derived structure | 6.44e-08 | 29 |
colon | 8.37e-07 | 9 |