FFCP PHASE1:Hg19::chr3:72361584..72361590,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:72361584..72361590,- | |||
|coexpression_cluster_id=C4343 | |||
|description=CAGE_peak_at_chr3:72361584..72361590,- | |description=CAGE_peak_at_chr3:72361584..72361590,- | ||
|id=chr3:72361584..72361590,- | |id=chr3:72361584..72361590,- | ||
|ontology_enrichment_celltype=CL:0002127!2.32e-13!1;CL:0000914!2.32e-13!1;CL:0000911!2.32e-13!1;CL:0000814!2.32e-13!1;CL:0002042!2.32e-13!1;CL:0002039!2.32e-13!1;CL:0002040!2.32e-13!1;CL:0002041!2.32e-13!1;CL:0002032!4.44e-12!165;CL:0000837!4.44e-12!165;CL:0000037!1.64e-11!172;CL:0000566!1.64e-11!172;CL:0000988!8.86e-11!182;CL:0000763!3.31e-09!112;CL:0000049!3.31e-09!112;CL:0000893!2.58e-07!2;CL:0002489!2.58e-07!2;CL:0000809!2.58e-07!2;CL:0000808!2.58e-07!2;CL:0000894!2.58e-07!2;CL:0000806!2.58e-07!2;CL:0000807!2.58e-07!2;CL:0000805!2.58e-07!2;CL:0002425!2.58e-07!2 | |ontology_enrichment_celltype=CL:0002127!2.32e-13!1;CL:0000914!2.32e-13!1;CL:0000911!2.32e-13!1;CL:0000814!2.32e-13!1;CL:0002042!2.32e-13!1;CL:0002039!2.32e-13!1;CL:0002040!2.32e-13!1;CL:0002041!2.32e-13!1;CL:0002032!4.44e-12!165;CL:0000837!4.44e-12!165;CL:0000037!1.64e-11!172;CL:0000566!1.64e-11!172;CL:0000988!8.86e-11!182;CL:0000763!3.31e-09!112;CL:0000049!3.31e-09!112;CL:0000893!2.58e-07!2;CL:0002489!2.58e-07!2;CL:0000809!2.58e-07!2;CL:0000808!2.58e-07!2;CL:0000894!2.58e-07!2;CL:0000806!2.58e-07!2;CL:0000807!2.58e-07!2;CL:0000805!2.58e-07!2;CL:0002425!2.58e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002127;2.21e-40;1!CL:0000911;2.21e-40;1!CL:0000814;2.21e-40;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,2.21e-40,1;CL:0000914,2.21e-40,1;CL:0000911,2.21e-40,1;CL:0000814,2.21e-40,1;CL:0002042,2.21e-40,1;CL:0002039,2.21e-40,1;CL:0002040,2.21e-40,1;CL:0002041,2.21e-40,1;CL:0000893,5.70e-21,2;CL:0002489,5.70e-21,2;CL:0000809,5.70e-21,2;CL:0000808,5.70e-21,2;CL:0000894,5.70e-21,2;CL:0000806,5.70e-21,2;CL:0000807,5.70e-21,2;CL:0000805,5.70e-21,2;CL:0002425,5.70e-21,2 | |||
|ontology_enrichment_development_v019=CL:0002425;5.69e-21;2 | |||
|ontology_enrichment_disease=DOID:2531!2.91e-37!51;DOID:0060083!2.91e-37!51;DOID:1240!2.92e-35!39;DOID:8692!6.93e-30!31;DOID:0060060!6.06e-13!1;DOID:0060061!6.06e-13!1;DOID:8691!6.06e-13!1;DOID:0050686!1.02e-12!137;DOID:2355!1.09e-12!1;DOID:0060058!5.49e-11!10;DOID:162!6.65e-08!235;DOID:14566!1.07e-07!239;DOID:74!5.60e-07!2;DOID:1036!6.81e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:8692;7.48e-21;31!DOID:1240;2.65e-19;39!DOID:2531;9.07e-15;51!DOID:0060083;9.07e-15;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,6.58e-26,39;DOID:8692,4.39e-21,31;DOID:2531,5.31e-20,51;DOID:0060083,5.31e-20,51;DOID:0050686,8.63e-08,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.42e-11,4;UBERON:0005058,3.42e-11,4;UBERON:0009113,3.42e-11,4;UBERON:0003295,3.42e-11,4;UBERON:0005562,3.42e-11,4;UBERON:0003351,6.78e-08,6;UBERON:0004177,6.04e-07,7;UBERON:0005057,6.04e-07,7 | |||
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|short_description=p@chr3:72361584..72361590,- | |short_description=p@chr3:72361584..72361590,- | ||
}} | }} |
Latest revision as of 23:33, 29 July 2015
Short description: | p@chr3:72361584..72361590, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:72361584..72361590, - |
Coexpression cluster: | C4343_acute_chronic_NK_Hair_xeroderma_adult_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 2.21e-40 | 1 |
immature NK T cell | 2.21e-40 | 1 |
effector T cell | 2.21e-40 | 1 |
mature NK T cell | 2.21e-40 | 1 |
immature NK T cell stage IV | 2.21e-40 | 1 |
immature NK T cell stage I | 2.21e-40 | 1 |
immature NK T cell stage II | 2.21e-40 | 1 |
immature NK T cell stage III | 2.21e-40 | 1 |
thymocyte | 5.70e-21 | 2 |
double negative thymocyte | 5.70e-21 | 2 |
double-positive, alpha-beta thymocyte | 5.70e-21 | 2 |
DN4 thymocyte | 5.70e-21 | 2 |
DN1 thymic pro-T cell | 5.70e-21 | 2 |
DN2 thymocyte | 5.70e-21 | 2 |
DN3 thymocyte | 5.70e-21 | 2 |
immature single positive thymocyte | 5.70e-21 | 2 |
early T lineage precursor | 5.70e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 3.42e-11 | 4 |
hemolymphoid system gland | 3.42e-11 | 4 |
thymic region | 3.42e-11 | 4 |
pharyngeal gland | 3.42e-11 | 4 |
thymus primordium | 3.42e-11 | 4 |
pharyngeal epithelium | 6.78e-08 | 6 |
hemopoietic organ | 6.04e-07 | 7 |
immune organ | 6.04e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
leukemia | 6.58e-26 | 39 |
myeloid leukemia | 4.39e-21 | 31 |
hematologic cancer | 5.31e-20 | 51 |
immune system cancer | 5.31e-20 | 51 |
organ system cancer | 8.63e-08 | 137 |