FFCP PHASE1:Hg19::chr3:55502510..55502543,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:55502510..55502543,-
|short_description=p@chr3:55502510..55502543,-
|description=CAGE_peak_at_chr3:55502510..55502543,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:55502510..55502543,- | |||
|coexpression_cluster_id=C1929 | |||
|description=CAGE_peak_at_chr3:55502510..55502543,- | |||
|id=chr3:55502510..55502543,- | |||
|ontology_enrichment_celltype=CL:0000055!1.36e-09!180;CL:0002620!5.15e-09!23;CL:0002570!2.65e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002537;1.99e-14;5!CL:0000349;2.87e-13;19!CL:0000153;7.16e-11;9!CL:0000447;7.16e-11;9!CL:0000327;1.78e-08;15!CL:0000499;5.20e-08;28!CL:0000138;6.70e-08;6!CL:0000134;1.74e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.21e-14,5;CL:0000349,2.36e-13,19;CL:0000153,5.96e-11,9;CL:0000447,5.96e-11,9;CL:0000327,1.57e-08,15;CL:0000058,5.21e-08,6;CL:0000138,5.21e-08,6;CL:0000499,5.29e-08,28;CL:0002536,7.58e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!8.82e-09!14;UBERON:0000158!8.82e-09!14;UBERON:0000305!9.62e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;1.99e-19;7!UBERON:0005631;1.89e-17;10!UBERON:0000158;1.89e-17;10!UBERON:0000478;4.63e-10;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,1.54e-19,7;UBERON:0005631,6.57e-19,14;UBERON:0000158,6.57e-19,14;UBERON:0004871,5.88e-17,8;UBERON:0000478,3.99e-10,24;UBERON:0004923,1.64e-08,66 | |||
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| ||
|short_description=p@chr3:55502510..55502543,- | |||
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Latest revision as of 22:42, 29 July 2015
Short description: | p@chr3:55502510..55502543, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:55502510..55502543, - |
Coexpression cluster: | C1929_Fibroblast_Olfactory_mesenchymal_Chondrocyte_normal_Mesenchymal_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.21e-14 | 5 |
extraembryonic cell | 2.36e-13 | 19 |
GAG secreting cell | 5.96e-11 | 9 |
carbohydrate secreting cell | 5.96e-11 | 9 |
extracellular matrix secreting cell | 1.57e-08 | 15 |
chondroblast | 5.21e-08 | 6 |
chondrocyte | 5.21e-08 | 6 |
stromal cell | 5.29e-08 | 28 |
amniotic epithelial cell | 7.58e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
amnion | 1.54e-19 | 7 |
extraembryonic membrane | 6.57e-19 | 14 |
membranous layer | 6.57e-19 | 14 |
somatic layer of lateral plate mesoderm | 5.88e-17 | 8 |
extraembryonic structure | 3.99e-10 | 24 |
organ component layer | 1.64e-08 | 66 |