FFCP PHASE1:Hg19::chr3:42515138..42515150,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:42515138..42515150,- | |||
|coexpression_cluster_id=C1926 | |coexpression_cluster_id=C1926 | ||
|description=CAGE_peak_at_chr3:42515138..42515150,- | |description=CAGE_peak_at_chr3:42515138..42515150,- | ||
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|ontology_enrichment_celltype=CL:0000071!9.81e-15!18;CL:0002546!9.81e-15!18;CL:1000413!1.97e-13!9;CL:0002139!2.70e-12!24;CL:0002594!2.52e-11!4;CL:0002544!5.23e-11!6;CL:0000359!7.29e-10!32;CL:0000222!1.82e-08!119;CL:0002494!2.22e-08!16;CL:0002078!1.20e-07!44;CL:0000115!1.54e-07!35;CL:0000192!8.41e-07!42;CL:0000514!8.41e-07!42;CL:0002548!8.53e-07!6 | |ontology_enrichment_celltype=CL:0000071!9.81e-15!18;CL:0002546!9.81e-15!18;CL:1000413!1.97e-13!9;CL:0002139!2.70e-12!24;CL:0002594!2.52e-11!4;CL:0002544!5.23e-11!6;CL:0000359!7.29e-10!32;CL:0000222!1.82e-08!119;CL:0002494!2.22e-08!16;CL:0002078!1.20e-07!44;CL:0000115!1.54e-07!35;CL:0000192!8.41e-07!42;CL:0000514!8.41e-07!42;CL:0002548!8.53e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002594;4.26e-74;4!CL:0002557;5.97e-34;1!CL:1000415;9.86e-18;2!CL:0000359;1.34e-09;32 | |ontology_enrichment_celltype_v019=CL:0002594;4.26e-74;4!CL:0002557;5.97e-34;1!CL:1000415;9.86e-18;2!CL:0000359;1.34e-09;32 | ||
|ontology_enrichment_celltype_v019_2=CL:0002594,7.04e-74,4;CL:0002557,5.05e-34,1;CL:1000415,7.67e-18,2;CL:0000359,5.18e-10,32;CL:0000192,1.25e-07,43;CL:0000514,1.25e-07,43 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4231;5.48e-18;2!DOID:1907;5.48e-18;2!DOID:201;7.17e-07;6!DOID:0060100;7.17e-07;6 | |ontology_enrichment_disease_v019=DOID:4231;5.48e-18;2!DOID:1907;5.48e-18;2!DOID:201;7.17e-07;6!DOID:0060100;7.17e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:4231,5.48e-18,2;DOID:1907,5.48e-18,2;DOID:201,7.17e-07,6;DOID:0060100,7.17e-07,6 | |||
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|short_description=p@chr3:42515138..42515150,- | |short_description=p@chr3:42515138..42515150,- | ||
}} | }} |
Latest revision as of 21:00, 29 July 2015
Short description: | p@chr3:42515138..42515150, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:42515138..42515150, - |
Coexpression cluster: | C1926_myxofibrosarcoma_Smooth_mesodermal_Multipotent_Fibroblast_basal_papillary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical artery | 7.04e-74 | 4 |
fibroblast of pulmonary artery | 5.05e-34 | 1 |
epithelial cell of gall bladder | 7.67e-18 | 2 |
vascular associated smooth muscle cell | 5.18e-10 | 32 |
smooth muscle cell | 1.25e-07 | 43 |
smooth muscle myoblast | 1.25e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 5.48e-18 | 2 |
malignant fibroxanthoma | 5.48e-18 | 2 |
connective tissue cancer | 7.17e-07 | 6 |
musculoskeletal system cancer | 7.17e-07 | 6 |