FFCP PHASE1:Hg19::chr3:193561630..193561644,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=153bp_to_ENST00000439074_5end | |||
|cluster_id=chr3:193561630..193561644,- | |||
|coexpression_cluster_id=C346 | |||
|description=CAGE_peak_1_at_ENST00000439074_5end | |||
|id=chr3:193561630..193561644,- | |||
|ontology_enrichment_celltype=CL:0002178!8.77e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002563;4.05e-40;4!CL:0002253;5.69e-21;2!CL:0002251;6.42e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.31e-40,4;CL:0002253,5.70e-21,2;CL:0002251,6.17e-09,20;CL:0000223,6.14e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0006242;6.62e-41;1!UBERON:0004161;1.62e-15;11!UBERON:0009497;2.68e-13;13!UBERON:0003104;4.36e-12;31 | |||
|ontology_enrichment_disease=DOID:299!3.37e-15!25;DOID:3493!3.46e-11!2;DOID:4929!9.65e-11!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.97e-18!35;UBERON:0000160!1.35e-13!27;UBERON:0004921!1.65e-11!129;UBERON:0004185!1.65e-11!129;UBERON:0001007!4.72e-10!155;UBERON:0001555!4.72e-10!155;UBERON:0007026!4.72e-10!155;UBERON:0004119!7.45e-09!169;UBERON:0000925!7.45e-09!169;UBERON:0006595!7.45e-09!169;UBERON:0002108!2.50e-08!14;UBERON:0009497!7.01e-07!25;UBERON:0000015!7.01e-07!25;UBERON:0002423!7.01e-07!25;UBERON:0006235!7.01e-07!25;UBERON:0004161!7.01e-07!25;UBERON:0002171!7.77e-07!1;UBERON:0006518!7.77e-07!1;UBERON:0008949!7.77e-07!1;UBERON:0000101!7.77e-07!1;UBERON:0002167!7.77e-07!1;UBERON:0000077!8.54e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;4.05e-40;4!UBERON:0001262;4.05e-40;4!UBERON:0004786;4.05e-40;4!UBERON:0004808;4.05e-40;4!UBERON:0001277;4.05e-40;4!UBERON:0000485;1.80e-23;7!UBERON:0003929;1.80e-23;7!UBERON:0003350;1.10e-20;8!UBERON:0002110;1.22e-14;3!UBERON:0001052;3.42e-11;4!UBERON:0000160;8.47e-10;17!UBERON:0004907;3.22e-09;5!UBERON:0000344;6.42e-09;20!UBERON:0005409;6.98e-08;22!UBERON:0002423;2.13e-07;25!UBERON:0002294;5.08e-07;7!UBERON:0001173;5.08e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,3.31e-40,4;UBERON:0001262,3.31e-40,4;UBERON:0004786,3.31e-40,4;UBERON:0004808,3.31e-40,4;UBERON:0001277,3.31e-40,4;UBERON:0003350,9.92e-21,8;UBERON:0000485,1.48e-18,9;UBERON:0002110,1.22e-14,3;UBERON:0006242,1.22e-14,3;UBERON:0005911,1.04e-12,82;UBERON:0003929,1.93e-12,54;UBERON:0001052,3.42e-11,4;UBERON:0000160,8.11e-10,17;UBERON:0004907,3.22e-09,5;UBERON:0000344,6.17e-09,20;UBERON:0009497,2.14e-07,25;UBERON:0000015,2.14e-07,25;UBERON:0002423,2.14e-07,25;UBERON:0006235,2.14e-07,25;UBERON:0004161,2.14e-07,25;UBERON:0001007,2.16e-07,145;UBERON:0001555,2.16e-07,145;UBERON:0007026,2.16e-07,145;UBERON:0005409,4.28e-07,25;UBERON:0004119,9.48e-07,160;UBERON:0000925,9.48e-07,160;UBERON:0006595,9.48e-07,160 | |||
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|short_description=p1@ENST00000439074 | |||
}} | }} |
Latest revision as of 19:35, 29 July 2015
Short description: | p1@ENST00000439074 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000439074_5end |
Coexpression cluster: | C346_gall_ductus_seminal_temporal_duodenum_Hepatocyte_liver |
Association with transcript: | 153bp_to_ENST00000439074_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.31e-40 | 4 |
epithelial cell of large intestine | 5.70e-21 | 2 |
epithelial cell of alimentary canal | 6.17e-09 | 20 |
endodermal cell | 6.14e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 3.31e-40 | 4 |
wall of intestine | 3.31e-40 | 4 |
gastrointestinal system mucosa | 3.31e-40 | 4 |
gastrointestinal system epithelium | 3.31e-40 | 4 |
intestinal epithelium | 3.31e-40 | 4 |
epithelium of mucosa | 9.92e-21 | 8 |
simple columnar epithelium | 1.48e-18 | 9 |
gallbladder | 1.22e-14 | 3 |
gall bladder primordium | 1.22e-14 | 3 |
endo-epithelium | 1.04e-12 | 82 |
gut epithelium | 1.93e-12 | 54 |
rectum | 3.42e-11 | 4 |
intestine | 8.11e-10 | 17 |
lower digestive tract | 3.22e-09 | 5 |
mucosa | 6.17e-09 | 20 |
epithelium of foregut-midgut junction | 2.14e-07 | 25 |
anatomical boundary | 2.14e-07 | 25 |
hepatobiliary system | 2.14e-07 | 25 |
foregut-midgut junction | 2.14e-07 | 25 |
septum transversum | 2.14e-07 | 25 |
digestive system | 2.16e-07 | 145 |
digestive tract | 2.16e-07 | 145 |
primitive gut | 2.16e-07 | 145 |
gastrointestinal system | 4.28e-07 | 25 |
endoderm-derived structure | 9.48e-07 | 160 |
endoderm | 9.48e-07 | 160 |
presumptive endoderm | 9.48e-07 | 160 |