FFCP PHASE1:Hg19::chr3:147127904..147127942,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=4bp_to_AB464362_5end | |||
|cluster_id=chr3:147127904..147127942,+ | |||
|coexpression_cluster_id=C368 | |||
|description=CAGE_peak_1_at_AB464362_5end | |||
|id=chr3:147127904..147127942,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.76e-13!25;CL:0000243!2.64e-11!15;CL:0000125!2.64e-11!15;CL:0000030!2.64e-11!15;CL:0000339!2.64e-11!15;CL:0000133!1.93e-10!59;CL:0000095!8.69e-10!17;CL:0000123!8.69e-10!17;CL:0000221!1.69e-08!71;CL:0000128!2.62e-08!7;CL:0000126!2.62e-08!7;CL:0000127!2.62e-08!7;CL:0002453!2.62e-08!7;CL:0002620!4.37e-08!23;CL:0000333!7.34e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0000708;2.31e-14;3!CL:0002559;2.54e-14;5!CL:0000064;5.67e-14;3!CL:0000067;5.67e-14;3!CL:0005012;5.67e-14;3!CL:0002304;5.67e-14;3!CL:0002603;7.20e-14;3!CL:0002564;7.10e-13;3!CL:0002575;2.18e-10;2!CL:0002549;4.66e-10;2!CL:0000047;8.99e-10;2!CL:0002561;2.41e-09;2!CL:0002319;7.73e-09;25!CL:0000346;4.21e-07;3!CL:1000428;4.21e-07;3!CL:0002590;8.32e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,2.31e-14,3;CL:0002559,2.54e-14,5;CL:0000064,6.33e-14,3;CL:0000067,6.33e-14,3;CL:0005012,6.33e-14,3;CL:0002304,6.33e-14,3;CL:0002603,7.21e-14,3;CL:0002564,8.74e-13,3;CL:0000221,3.38e-11,72;CL:0000133,8.76e-11,59;CL:0002575,2.19e-10,2;CL:0002549,4.66e-10,2;CL:0002561,2.41e-09,2;CL:0002319,7.23e-09,25;CL:0000346,4.21e-07,3;CL:1000428,4.21e-07,3;CL:0002590,8.21e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.01e-13;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.72e-56!82;UBERON:0005743!6.65e-55!86;UBERON:0000073!1.50e-53!94;UBERON:0001016!1.50e-53!94;UBERON:0000955!1.51e-45!69;UBERON:0006238!1.51e-45!69;UBERON:0002616!2.38e-40!59;UBERON:0001049!6.03e-37!57;UBERON:0005068!6.03e-37!57;UBERON:0006241!6.03e-37!57;UBERON:0007135!6.03e-37!57;UBERON:0003075!7.49e-36!86;UBERON:0007284!7.49e-36!86;UBERON:0004121!1.15e-34!169;UBERON:0002346!1.52e-33!90;UBERON:0000924!2.32e-33!173;UBERON:0006601!2.32e-33!173;UBERON:0000033!4.95e-30!123;UBERON:0000153!5.67e-29!129;UBERON:0007811!5.67e-29!129;UBERON:0001893!1.75e-22!34;UBERON:0002791!1.64e-21!33;UBERON:0003056!2.79e-21!61;UBERON:0002780!8.65e-21!41;UBERON:0001890!8.65e-21!41;UBERON:0006240!8.65e-21!41;UBERON:0002020!1.42e-20!34;UBERON:0003528!1.42e-20!34;UBERON:0001869!1.93e-20!32;UBERON:0003080!4.15e-20!42;UBERON:0003076!6.00e-20!15;UBERON:0003057!6.00e-20!15;UBERON:0004733!6.12e-16!12;UBERON:0002028!6.12e-16!12;UBERON:0007277!6.12e-16!12;UBERON:0000956!9.51e-15!25;UBERON:0000203!9.51e-15!25;UBERON:0004732!1.79e-14!13;UBERON:0002619!1.90e-13!22;UBERON:0000475!2.53e-13!365;UBERON:0002200!1.20e-12!11;UBERON:0006876!1.20e-12!11;UBERON:0007023!1.48e-12!115;UBERON:0002680!1.10e-11!9;UBERON:0001895!1.10e-11!9;UBERON:0010092!1.10e-11!9;UBERON:0001950!1.79e-11!20;UBERON:0002037!4.35e-11!6;UBERON:0006215!4.35e-11!6;UBERON:0005284!1.32e-09!5;UBERON:0005174!1.51e-08!5;UBERON:0001137!1.51e-08!5;UBERON:0000119!2.19e-08!312;UBERON:0000488!4.54e-08!4;UBERON:0000200!6.61e-08!6;UBERON:0009663!2.43e-07!7;UBERON:0002308!2.43e-07!9;UBERON:0000125!2.43e-07!9;UBERON:0001872!4.26e-07!5;UBERON:0000483!4.57e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;4.77e-25;6!UBERON:0006876;1.76e-24;11!UBERON:0004733;2.73e-21;12!UBERON:0002028;2.73e-21;12!UBERON:0004732;1.49e-19;13!UBERON:0000488;8.98e-18;4!UBERON:0002680;1.67e-16;9!UBERON:0001895;1.67e-16;9!UBERON:0005284;1.54e-14;5!UBERON:0003210;2.31e-14;3!UBERON:0002073;2.54e-14;5!UBERON:0001778;5.67e-14;3!UBERON:0001775;5.67e-14;3!UBERON:0011135;3.21e-13;5!UBERON:0002216;3.21e-13;5!UBERON:0011134;3.21e-13;5!UBERON:0002209;3.21e-13;5!UBERON:0002213;3.21e-13;5!UBERON:0007844;3.21e-13;5!UBERON:0011138;3.21e-13;5!UBERON:0001130;3.21e-13;5!UBERON:0001066;3.21e-13;5!UBERON:0001468;3.21e-13;5!UBERON:0002242;7.10e-13;3!UBERON:0004905;9.00e-13;8!UBERON:0000982;9.00e-13;8!UBERON:0004770;9.00e-13;8!UBERON:0002203;7.01e-12;6!UBERON:0001768;7.01e-12;6!UBERON:0002200;7.01e-12;6!UBERON:0005629;4.66e-10;2!UBERON:0005358;4.66e-10;2!UBERON:0001886;4.66e-10;2!UBERON:0004086;4.66e-10;2!UBERON:0005282;4.66e-10;2!UBERON:0005281;4.66e-10;2!UBERON:0007625;8.55e-10;11!UBERON:0001017;8.60e-10;75!UBERON:0010371;1.36e-09;31!UBERON:0005933;2.41e-09;2!UBERON:0005942;2.41e-09;2!UBERON:0005932;2.41e-09;2!UBERON:0001016;1.49e-08;83!UBERON:0001801;1.27e-07;14!UBERON:0000955;3.15e-07;68!UBERON:0000412;4.21e-07;3!UBERON:0001992;4.21e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.13e-25,6;UBERON:0006215,3.13e-25,6;UBERON:0006876,1.87e-24,11;UBERON:0004733,2.66e-21,12;UBERON:0002028,2.66e-21,12;UBERON:0007277,2.66e-21,12;UBERON:0001017,3.78e-21,81;UBERON:0003076,4.54e-21,15;UBERON:0003057,4.54e-21,15;UBERON:0004732,1.45e-19,13;UBERON:0001016,1.53e-18,89;UBERON:0000488,1.00e-17,4;UBERON:0004121,1.44e-17,171;UBERON:0000924,1.44e-17,171;UBERON:0006601,1.44e-17,171;UBERON:0002680,1.27e-16,9;UBERON:0001895,1.27e-16,9;UBERON:0010092,1.27e-16,9;UBERON:0000955,3.54e-15,68;UBERON:0006238,3.54e-15,68;UBERON:0005284,1.52e-14,5;UBERON:0003210,2.31e-14,3;UBERON:0002073,2.54e-14,5;UBERON:0005086,2.54e-14,5;UBERON:0010371,3.58e-14,104;UBERON:0001778,6.33e-14,3;UBERON:0001775,6.33e-14,3;UBERON:0011135,2.92e-13,5;UBERON:0002216,2.92e-13,5;UBERON:0011134,2.92e-13,5;UBERON:0002209,2.92e-13,5;UBERON:0002213,2.92e-13,5;UBERON:0005856,2.92e-13,5;UBERON:0005866,2.92e-13,5;UBERON:0005863,2.92e-13,5;UBERON:0007844,2.92e-13,5;UBERON:0011138,2.92e-13,5;UBERON:0001130,2.92e-13,5;UBERON:0001066,2.92e-13,5;UBERON:0001468,2.92e-13,5;UBERON:0004905,8.46e-13,8;UBERON:0000982,8.46e-13,8;UBERON:0004770,8.46e-13,8;UBERON:0002242,8.74e-13,3;UBERON:0003068,8.74e-13,3;UBERON:0002328,8.74e-13,3;UBERON:0004880,8.74e-13,3;UBERON:0003075,4.11e-12,82;UBERON:0007284,4.11e-12,82;UBERON:0002203,7.53e-12,6;UBERON:0001768,7.53e-12,6;UBERON:0002200,7.53e-12,6;UBERON:0002346,2.28e-11,86;UBERON:0005629,4.66e-10,2;UBERON:0005358,4.66e-10,2;UBERON:0001886,4.66e-10,2;UBERON:0004086,4.66e-10,2;UBERON:0005282,4.66e-10,2;UBERON:0005281,4.66e-10,2;UBERON:0005085,7.62e-10,31;UBERON:0007625,8.88e-10,11;UBERON:0001049,1.91e-09,56;UBERON:0005068,1.91e-09,56;UBERON:0006241,1.91e-09,56;UBERON:0007135,1.91e-09,56;UBERON:0005933,2.41e-09,2;UBERON:0005942,2.41e-09,2;UBERON:0005932,2.41e-09,2;UBERON:0010314,5.05e-09,132;UBERON:0000073,1.47e-08,53;UBERON:0002616,1.47e-08,53;UBERON:0001801,1.30e-07,14;UBERON:0011216,4.04e-07,223;UBERON:0000412,4.21e-07,3;UBERON:0001992,4.21e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.990130823680373,1.98838425436749,0,0,0,0,10.2190478203734,4.28401451612931,6.26909442956176,0,0.410623275218653,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,12.1004565970007,5.09977614163897,6.23626978421195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8653813498192,9.21881479167998,0,0,0,0,0.23486899728753,0.809364721840658,0.702254033511242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.89694817844431,0,0.211931901159562,0,0.206105058476878,1.28820270022815,0.930584281657949,0,0,0,0.0920498986422993,0,1.06502877754984,0.201504196455281,0,0,0,0,0,0,0.580969714347592,4.35376431064556,0,0,14.0804579096834,16.724264393015,0,2.78620756819187,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40194934417936,0,0,0,0,0,0,0,9.5062932079563,0.821860859650752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,17.2681869891856,13.0788020649984,7.99387315448355,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,5.33598710867173,6.50699269288109,0.773288812777695,0.335032530668698,1.27587750330633,0,0,0,1.34960640891054,4.00136416847742,1.08506009479894,0,0,0,0,0,0,0,0,0,0.173767228936166,85.5651058112176,35.686916076329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410635780069046,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457847324091717,1.07262349896764,0,0,0,0,0.308097234229289,0.15350367472613,0.275673144969061,0,0,0.511359764496605,0,0,0,0,0,0,0,0,0,0,0,0,0,13.397701296948,3.79655309662471,0.953150969619124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306806047506464,0,0,0,0,0,0,0,0,0.969332746095218,0.463840490809256,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0.723578631752448,1.52581736317083,1.65868889896837,5.6154047601174,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606610196826093,0,0,0,0,0,0,0,1.22429104652196,1.83241080922615,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,2.17446729717782,1.77824838730966,0,0.288950589901519,1.20084057741958,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36310417428337,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.250381861413,4.0138643698305,0.887432412294818,1.05563885000352,0.691743174681154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673498977531838,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0.567515953566836,0.184105950251841,0,0,0,0.646948868380091,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0.205116364240755,0,0.691572524642179,0.161475645631851,0,0,0,0,0,0,0,0.795664888465099,0,0,0,0,0,0,0.202612753855184,0.781078098613847,0.206686796501184,0.126831620387814,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.747667062745149,0.263091094251396,0,0,0,1.25692471932802,0,0,0,0,0.643288897589907,0,0.581207126840626,2.78173235684127,0,0,0,0,0,0.236664001461131,0.340853619036631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0.588925401344836,0.891139200981258,1.2679671827502,0,0,0,0,0,0,0,0,0,0.143339583151451,7.73080654746605,0,0.872701380680755,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,4.97501663675268,0.103432995861895,0.213233981900981,0,0,0,0,0,0.202117188958219,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@AB464362 | |||
}} |
Latest revision as of 16:45, 29 July 2015
Short description: | p1@AB464362 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AB464362_5end |
Coexpression cluster: | C368_Pericytes_Fibroblast_Nucleus_Anulus_Meningeal_Mesenchymal_Smooth |
Association with transcript: | 4bp_to_AB464362_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 2.31e-14 | 3 |
hair follicle cell | 2.54e-14 | 5 |
ciliated cell | 6.33e-14 | 3 |
ciliated epithelial cell | 6.33e-14 | 3 |
multi-ciliated epithelial cell | 6.33e-14 | 3 |
non-pigmented ciliary epithelial cell | 6.33e-14 | 3 |
astrocyte of the cerebellum | 7.21e-14 | 3 |
nucleus pulposus cell of intervertebral disc | 8.74e-13 | 3 |
ectodermal cell | 3.38e-11 | 72 |
neurectodermal cell | 8.76e-11 | 59 |
central nervous system pericyte | 2.19e-10 | 2 |
fibroblast of choroid plexus | 4.66e-10 | 2 |
outer root sheath cell | 2.41e-09 | 2 |
neural cell | 7.23e-09 | 25 |
hair follicle dermal papilla cell | 4.21e-07 | 3 |
stem cell of epidermis | 4.21e-07 | 3 |
smooth muscle cell of the brain vasculature | 8.21e-07 | 3 |