FFCP PHASE1:Hg19::chr2:6072914..6072929,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000431188_5end | |association_with_transcript=0bp_to_ENST00000431188_5end | ||
|cluster_id=chr2:6072914..6072929,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_ENST00000431188_5end | |description=CAGE_peak_1_at_ENST00000431188_5end | ||
|id=chr2:6072914..6072929,+ | |id=chr2:6072914..6072929,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002586;4.80e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,4.86e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.68e-23;82!UBERON:0006241;1.59e-08;3!UBERON:0003057;1.59e-08;3!UBERON:0006215;2.45e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.01e-71!94;UBERON:0001016!1.01e-71!94;UBERON:0005743!1.32e-71!86;UBERON:0001049!4.47e-69!57;UBERON:0005068!4.47e-69!57;UBERON:0006241!4.47e-69!57;UBERON:0007135!4.47e-69!57;UBERON:0001017!1.30e-65!82;UBERON:0003075!2.24e-62!86;UBERON:0007284!2.24e-62!86;UBERON:0002346!1.03e-58!90;UBERON:0002616!2.66e-57!59;UBERON:0002780!8.29e-56!41;UBERON:0001890!8.29e-56!41;UBERON:0006240!8.29e-56!41;UBERON:0000955!5.30e-55!69;UBERON:0006238!5.30e-55!69;UBERON:0007023!1.34e-54!115;UBERON:0003080!3.52e-54!42;UBERON:0001893!2.86e-48!34;UBERON:0002020!3.00e-48!34;UBERON:0003528!3.00e-48!34;UBERON:0002791!1.23e-46!33;UBERON:0003056!8.00e-46!61;UBERON:0001869!1.01e-44!32;UBERON:0004121!8.36e-38!169;UBERON:0000924!2.06e-36!173;UBERON:0006601!2.06e-36!173;UBERON:0002619!6.76e-36!22;UBERON:0000956!1.75e-33!25;UBERON:0000203!1.75e-33!25;UBERON:0001950!8.38e-33!20;UBERON:0000033!9.34e-33!123;UBERON:0000153!1.53e-31!129;UBERON:0007811!1.53e-31!129;UBERON:0000025!1.91e-20!194;UBERON:0002308!3.79e-16!9;UBERON:0000125!3.79e-16!9;UBERON:0002420!1.05e-15!9;UBERON:0007245!1.05e-15!9;UBERON:0010009!1.05e-15!9;UBERON:0010011!1.05e-15!9;UBERON:0000454!1.05e-15!9;UBERON:0003076!1.90e-15!15;UBERON:0003057!1.90e-15!15;UBERON:0004111!9.99e-15!241;UBERON:0000483!1.79e-13!309;UBERON:0001871!3.64e-13!7;UBERON:0000119!3.84e-13!312;UBERON:0009663!7.50e-13!7;UBERON:0004732!1.45e-12!13;UBERON:0000477!3.74e-12!286;UBERON:0002298!1.96e-11!8;UBERON:0004733!5.13e-11!12;UBERON:0002028!5.13e-11!12;UBERON:0007277!5.13e-11!12;UBERON:0000200!8.15e-11!6;UBERON:0000064!3.36e-10!219;UBERON:0001872!3.00e-09!5;UBERON:0000349!3.73e-09!5;UBERON:0002021!3.80e-09!5;UBERON:0001894!7.84e-09!7;UBERON:0006222!7.84e-09!7;UBERON:0000062!1.70e-08!511;UBERON:0000475!5.49e-08!365;UBERON:0000369!1.04e-07!4;UBERON:0002435!1.04e-07!4;UBERON:0000204!1.04e-07!4;UBERON:0010082!1.04e-07!4;UBERON:0000481!9.01e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.20e-55;34!UBERON:0003528;4.29e-55;34!UBERON:0002020;4.29e-55;34!UBERON:0002780;7.10e-55;41!UBERON:0001890;7.10e-55;41!UBERON:0002791;2.76e-54;32!UBERON:0001869;3.62e-54;32!UBERON:0002619;4.75e-51;22!UBERON:0000073;7.58e-51;53!UBERON:0002616;7.58e-51;53!UBERON:0001950;1.48e-46;20!UBERON:0000956;2.38e-44;25!UBERON:0000203;2.38e-44;25!UBERON:0001017;7.53e-34;75!UBERON:0000955;1.51e-33;68!UBERON:0001016;3.67e-30;83!UBERON:0000125;1.44e-22;9!UBERON:0002308;1.44e-22;9!UBERON:0002420;6.33e-22;9!UBERON:0007245;6.33e-22;9!UBERON:0010009;6.33e-22;9!UBERON:0010011;6.33e-22;9!UBERON:0000454;6.33e-22;9!UBERON:0004732;6.45e-18;13!UBERON:0009663;8.15e-18;7!UBERON:0001871;4.64e-16;6!UBERON:0002298;5.82e-16;6!UBERON:0004733;1.14e-15;12!UBERON:0002028;1.14e-15;12!UBERON:0000200;7.30e-15;6!UBERON:0007023;7.57e-15;114!UBERON:0001872;1.29e-12;5!UBERON:0000349;1.66e-12;5!UBERON:0002021;1.80e-12;5!UBERON:0001894;3.26e-12;7!UBERON:0011216;1.86e-11;132!UBERON:0000369;2.05e-10;4!UBERON:0002435;2.05e-10;4!UBERON:0000204;2.05e-10;4!UBERON:0010314;1.37e-09;132!UBERON:0002680;2.19e-09;9!UBERON:0001895;2.19e-09;9!UBERON:0000988;7.21e-09;3!UBERON:0001896;8.73e-09;3!UBERON:0005290;8.73e-09;3!UBERON:0002240;1.59e-08;3!UBERON:0005174;1.59e-08;3!UBERON:0001137;1.59e-08;3!UBERON:0001870;3.91e-08;3!UBERON:0005383;4.15e-08;3!UBERON:0005382;4.15e-08;3!UBERON:0001781;4.80e-08;3!UBERON:0001782;4.80e-08;3!UBERON:0000966;5.17e-08;5!UBERON:0005388;5.17e-08;5!UBERON:0001802;5.17e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.07e-99,56;UBERON:0005068,7.07e-99,56;UBERON:0006241,7.07e-99,56;UBERON:0007135,7.07e-99,56;UBERON:0000073,1.25e-91,53;UBERON:0002616,1.25e-91,53;UBERON:0001017,2.13e-87,81;UBERON:0003075,1.77e-84,82;UBERON:0007284,1.77e-84,82;UBERON:0001016,2.41e-83,89;UBERON:0002346,7.32e-80,86;UBERON:0000955,1.81e-77,68;UBERON:0006238,1.81e-77,68;UBERON:0002780,9.61e-77,41;UBERON:0001890,9.61e-77,41;UBERON:0003080,9.61e-77,41;UBERON:0006240,9.61e-77,41;UBERON:0010371,6.35e-66,104;UBERON:0001893,1.39e-65,34;UBERON:0003528,1.49e-65,34;UBERON:0002020,1.49e-65,34;UBERON:0003056,1.09e-63,61;UBERON:0002791,1.09e-60,32;UBERON:0001869,1.70e-60,32;UBERON:0002619,4.42e-51,22;UBERON:0010314,8.23e-51,132;UBERON:0007023,2.32e-50,114;UBERON:0004121,8.68e-48,171;UBERON:0000924,8.68e-48,171;UBERON:0006601,8.68e-48,171;UBERON:0001950,1.31e-46,20;UBERON:0000956,2.24e-44,25;UBERON:0000203,2.24e-44,25;UBERON:0011216,8.50e-29,223;UBERON:0000025,1.80e-24,192;UBERON:0000125,1.48e-22,9;UBERON:0002308,1.48e-22,9;UBERON:0003076,4.10e-22,15;UBERON:0003057,4.10e-22,15;UBERON:0002420,6.48e-22,9;UBERON:0007245,6.48e-22,9;UBERON:0010009,6.48e-22,9;UBERON:0010011,6.48e-22,9;UBERON:0000454,6.48e-22,9;UBERON:0004732,6.16e-18,13;UBERON:0009663,8.35e-18,7;UBERON:0004111,1.44e-17,240;UBERON:0001871,4.64e-16,6;UBERON:0002298,5.75e-16,6;UBERON:0004733,1.09e-15,12;UBERON:0002028,1.09e-15,12;UBERON:0007277,1.09e-15,12;UBERON:0000483,2.90e-15,306;UBERON:0000119,5.77e-15,309;UBERON:0000200,7.13e-15,6;UBERON:0001872,1.27e-12,5;UBERON:0000349,1.74e-12,5;UBERON:0002021,1.78e-12,5;UBERON:0001894,3.19e-12,7;UBERON:0006222,3.19e-12,7;UBERON:0001781,1.67e-10,4;UBERON:0000369,2.08e-10,4;UBERON:0002435,2.08e-10,4;UBERON:0000204,2.08e-10,4;UBERON:0010082,2.08e-10,4;UBERON:0000966,2.49e-10,6;UBERON:0005388,2.49e-10,6;UBERON:0001802,2.49e-10,6;UBERON:0002680,2.13e-09,9;UBERON:0001895,2.13e-09,9;UBERON:0010092,2.13e-09,9;UBERON:0000988,7.21e-09,3;UBERON:0001896,8.62e-09,3;UBERON:0005290,8.62e-09,3;UBERON:0010096,8.62e-09,3;UBERON:0002240,1.58e-08,3;UBERON:0005174,1.58e-08,3;UBERON:0001137,1.58e-08,3;UBERON:0001870,3.64e-08,3;UBERON:0005383,4.20e-08,3;UBERON:0005382,4.20e-08,3;UBERON:0001782,4.86e-08,3;UBERON:0005424,4.86e-08,3;UBERON:0000923,9.55e-07,560;UBERON:0010316,9.55e-07,560;UBERON:0005291,9.55e-07,560;UBERON:0006598,9.55e-07,560;UBERON:0010317,9.55e-07,560;UBERON:0002532,9.55e-07,560 | |||
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|short_description=p1@ENST00000431188 | |short_description=p1@ENST00000431188 | ||
}} | }} |
Latest revision as of 11:08, 29 July 2015
Short description: | p1@ENST00000431188 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000431188_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000431188_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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retinal pigment epithelial cell | 4.86e-08 | 3 |