FFCP PHASE1:Hg19::chr2:43452764..43452781,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:43452764..43452781,- | |||
|description=CAGE_peak_at_chr2:43452764..43452781,- | |description=CAGE_peak_at_chr2:43452764..43452781,- | ||
|id=chr2:43452764..43452781,- | |id=chr2:43452764..43452781,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000623;3.74e-09;3!CL:0000226;1.27e-08;3!CL:0000842;1.27e-08;3!CL:0000622;1.61e-08;5!CL:0000094;4.34e-08;8!CL:0002564;8.24e-08;3!CL:0000154;4.34e-07;6 | |ontology_enrichment_celltype_v019=CL:0000623;3.74e-09;3!CL:0000226;1.27e-08;3!CL:0000842;1.27e-08;3!CL:0000622;1.61e-08;5!CL:0000094;4.34e-08;8!CL:0002564;8.24e-08;3!CL:0000154;4.34e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.61e-10,168;CL:0000738,4.18e-10,136;CL:0000988,2.45e-09,177;CL:0000623,3.52e-09,3;CL:0000825,3.52e-09,3;CL:0000226,7.55e-09,3;CL:0000842,7.55e-09,3;CL:0002032,1.23e-08,161;CL:0000837,1.23e-08,161;CL:0000622,1.32e-08,5;CL:0000094,4.22e-08,8;CL:0000154,3.69e-07,6;CL:0002564,3.87e-07,3;CL:0002087,8.98e-07,115;CL:0000771,9.41e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.32e-07!112 | |ontology_enrichment_uberon=UBERON:0002193!9.32e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.26e-09;15!UBERON:0000179;1.26e-09;15!UBERON:0000463;1.26e-09;15!UBERON:0011135;6.83e-08;5!UBERON:0002216;6.83e-08;5!UBERON:0011134;6.83e-08;5!UBERON:0002209;6.83e-08;5!UBERON:0002213;6.83e-08;5!UBERON:0007844;6.83e-08;5!UBERON:0011138;6.83e-08;5!UBERON:0001130;6.83e-08;5!UBERON:0001066;6.83e-08;5!UBERON:0001468;6.83e-08;5!UBERON:0002242;8.24e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.26e-09;15!UBERON:0000179;1.26e-09;15!UBERON:0000463;1.26e-09;15!UBERON:0011135;6.83e-08;5!UBERON:0002216;6.83e-08;5!UBERON:0011134;6.83e-08;5!UBERON:0002209;6.83e-08;5!UBERON:0002213;6.83e-08;5!UBERON:0007844;6.83e-08;5!UBERON:0011138;6.83e-08;5!UBERON:0001130;6.83e-08;5!UBERON:0001066;6.83e-08;5!UBERON:0001468;6.83e-08;5!UBERON:0002242;8.24e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.31e-10,15;UBERON:0000179,8.31e-10,15;UBERON:0000463,8.31e-10,15;UBERON:0011135,2.76e-07,5;UBERON:0002216,2.76e-07,5;UBERON:0011134,2.76e-07,5;UBERON:0002209,2.76e-07,5;UBERON:0002213,2.76e-07,5;UBERON:0005856,2.76e-07,5;UBERON:0005866,2.76e-07,5;UBERON:0005863,2.76e-07,5;UBERON:0007844,2.76e-07,5;UBERON:0011138,2.76e-07,5;UBERON:0001130,2.76e-07,5;UBERON:0001066,2.76e-07,5;UBERON:0001468,2.76e-07,5;UBERON:0002242,3.87e-07,3;UBERON:0003068,3.87e-07,3;UBERON:0002328,3.87e-07,3;UBERON:0004880,3.87e-07,3 | |||
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| ||
|short_description=p@chr2:43452764..43452781,- | |short_description=p@chr2:43452764..43452781,- | ||
}} | }} |
Latest revision as of 10:16, 29 July 2015
Short description: | p@chr2:43452764..43452781, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:43452764..43452781, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.61e-10 | 168 |
leukocyte | 4.18e-10 | 136 |
hematopoietic cell | 2.45e-09 | 177 |
natural killer cell | 3.52e-09 | 3 |
pro-NK cell | 3.52e-09 | 3 |
single nucleate cell | 7.55e-09 | 3 |
mononuclear cell | 7.55e-09 | 3 |
hematopoietic oligopotent progenitor cell | 1.23e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.23e-08 | 161 |
acinar cell | 1.32e-08 | 5 |
granulocyte | 4.22e-08 | 8 |
protein secreting cell | 3.69e-07 | 6 |
nucleus pulposus cell of intervertebral disc | 3.87e-07 | 3 |
nongranular leukocyte | 8.98e-07 | 115 |
eosinophil | 9.41e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 8.31e-10 | 15 |
haemolymphatic fluid | 8.31e-10 | 15 |
organism substance | 8.31e-10 | 15 |
intervertebral cartilage | 2.76e-07 | 5 |
symphysis | 2.76e-07 | 5 |
nonsynovial joint | 2.76e-07 | 5 |
fibrous joint | 2.76e-07 | 5 |
cartilaginous joint | 2.76e-07 | 5 |
developing mesenchymal condensation | 2.76e-07 | 5 |
pre-cartilage condensation | 2.76e-07 | 5 |
cartilaginous condensation | 2.76e-07 | 5 |
cartilage element | 2.76e-07 | 5 |
post-cranial axial skeletal system | 2.76e-07 | 5 |
vertebral column | 2.76e-07 | 5 |
intervertebral disk | 2.76e-07 | 5 |
intervertebral joint | 2.76e-07 | 5 |
nucleus pulposus | 3.87e-07 | 3 |
axial mesoderm | 3.87e-07 | 3 |
notochord | 3.87e-07 | 3 |
chordamesoderm | 3.87e-07 | 3 |