FFCP PHASE1:Hg19::chr2:241897125..241897142,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:241897125..241897142,- | |||
|coexpression_cluster_id=C2694 | |coexpression_cluster_id=C2694 | ||
|description=CAGE_peak_at_chr2:241897125..241897142,- | |description=CAGE_peak_at_chr2:241897125..241897142,- | ||
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|ontology_enrichment_celltype=CL:0002564!3.46e-16!3;CL:0000594!2.96e-15!3;CL:0000188!2.57e-13!9;CL:0002602!9.75e-12!2;CL:0000035!1.90e-08!20;CL:0000214!1.75e-07!3 | |ontology_enrichment_celltype=CL:0002564!3.46e-16!3;CL:0000594!2.96e-15!3;CL:0000188!2.57e-13!9;CL:0002602!9.75e-12!2;CL:0000035!1.90e-08!20;CL:0000214!1.75e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002602;3.57e-45;2!CL:0002564;1.84e-30;3!CL:0002575;3.43e-12;2!CL:0000669;9.90e-07;4 | |ontology_enrichment_celltype_v019=CL:0002602;3.57e-45;2!CL:0002564;1.84e-30;3!CL:0002575;3.43e-12;2!CL:0000669;9.90e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002602,3.19e-45,2;CL:0002564,1.98e-30,3;CL:0002575,3.24e-12,2;CL:0000669,9.63e-07,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004905!1.17e-16!5;UBERON:0000982!1.17e-16!5;UBERON:0004770!1.17e-16!5;UBERON:0002242!3.46e-16!3;UBERON:0003068!3.46e-16!3;UBERON:0002328!3.46e-16!3;UBERON:0004880!3.46e-16!3;UBERON:0009568!9.75e-12!2;UBERON:0002216!9.75e-12!2;UBERON:0002209!9.75e-12!2;UBERON:0002213!9.75e-12!2;UBERON:0004267!9.75e-12!2;UBERON:0006444!9.75e-12!2;UBERON:0001995!9.75e-12!2;UBERON:0004715!9.75e-12!2;UBERON:0001468!9.75e-12!2;UBERON:0001130!9.75e-12!2;UBERON:0001066!9.75e-12!2;UBERON:0002418!4.29e-08!3;UBERON:0004755!4.29e-08!3;UBERON:0006915!1.75e-07!3;UBERON:0002018!1.75e-07!3;UBERON:0002217!1.75e-07!3;UBERON:0007616!1.75e-07!3 | |ontology_enrichment_uberon=UBERON:0004905!1.17e-16!5;UBERON:0000982!1.17e-16!5;UBERON:0004770!1.17e-16!5;UBERON:0002242!3.46e-16!3;UBERON:0003068!3.46e-16!3;UBERON:0002328!3.46e-16!3;UBERON:0004880!3.46e-16!3;UBERON:0009568!9.75e-12!2;UBERON:0002216!9.75e-12!2;UBERON:0002209!9.75e-12!2;UBERON:0002213!9.75e-12!2;UBERON:0004267!9.75e-12!2;UBERON:0006444!9.75e-12!2;UBERON:0001995!9.75e-12!2;UBERON:0004715!9.75e-12!2;UBERON:0001468!9.75e-12!2;UBERON:0001130!9.75e-12!2;UBERON:0001066!9.75e-12!2;UBERON:0002418!4.29e-08!3;UBERON:0004755!4.29e-08!3;UBERON:0006915!1.75e-07!3;UBERON:0002018!1.75e-07!3;UBERON:0002217!1.75e-07!3;UBERON:0007616!1.75e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0011135;7.40e-71;5!UBERON:0002216;7.40e-71;5!UBERON:0011134;7.40e-71;5!UBERON:0002209;7.40e-71;5!UBERON:0002213;7.40e-71;5!UBERON:0007844;7.40e-71;5!UBERON:0011138;7.40e-71;5!UBERON:0001130;7.40e-71;5!UBERON:0001066;7.40e-71;5!UBERON:0001468;7.40e-71;5!UBERON:0006444;3.57e-45;2!UBERON:0001995;3.57e-45;2!UBERON:0004715;3.57e-45;2!UBERON:0004905;1.45e-44;8!UBERON:0000982;1.45e-44;8!UBERON:0004770;1.45e-44;8!UBERON:0002418;1.58e-30;3!UBERON:0004755;1.58e-30;3!UBERON:0002242;1.84e-30;3!UBERON:0000075;1.38e-22;16!UBERON:0004765;4.35e-14;26 | |ontology_enrichment_uberon_v019=UBERON:0011135;7.40e-71;5!UBERON:0002216;7.40e-71;5!UBERON:0011134;7.40e-71;5!UBERON:0002209;7.40e-71;5!UBERON:0002213;7.40e-71;5!UBERON:0007844;7.40e-71;5!UBERON:0011138;7.40e-71;5!UBERON:0001130;7.40e-71;5!UBERON:0001066;7.40e-71;5!UBERON:0001468;7.40e-71;5!UBERON:0006444;3.57e-45;2!UBERON:0001995;3.57e-45;2!UBERON:0004715;3.57e-45;2!UBERON:0004905;1.45e-44;8!UBERON:0000982;1.45e-44;8!UBERON:0004770;1.45e-44;8!UBERON:0002418;1.58e-30;3!UBERON:0004755;1.58e-30;3!UBERON:0002242;1.84e-30;3!UBERON:0000075;1.38e-22;16!UBERON:0004765;4.35e-14;26 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,7.40e-71,5;UBERON:0002216,7.40e-71,5;UBERON:0011134,7.40e-71,5;UBERON:0002209,7.40e-71,5;UBERON:0002213,7.40e-71,5;UBERON:0005856,7.40e-71,5;UBERON:0005866,7.40e-71,5;UBERON:0005863,7.40e-71,5;UBERON:0007844,7.40e-71,5;UBERON:0011138,7.40e-71,5;UBERON:0001130,7.40e-71,5;UBERON:0001066,7.40e-71,5;UBERON:0001468,7.40e-71,5;UBERON:0006444,3.19e-45,2;UBERON:0001995,3.19e-45,2;UBERON:0004715,3.19e-45,2;UBERON:0004905,1.45e-44,8;UBERON:0000982,1.45e-44,8;UBERON:0004770,1.45e-44,8;UBERON:0002418,1.47e-30,3;UBERON:0004755,1.47e-30,3;UBERON:0002242,1.98e-30,3;UBERON:0003068,1.98e-30,3;UBERON:0002328,1.98e-30,3;UBERON:0004880,1.98e-30,3;UBERON:0000075,1.38e-22,16;UBERON:0011137,2.68e-07,14 | |||
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|short_description=p@chr2:241897125..241897142,- | |short_description=p@chr2:241897125..241897142,- | ||
}} | }} |
Latest revision as of 08:34, 29 July 2015
Short description: | p@chr2:241897125..241897142, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:241897125..241897142, - |
Coexpression cluster: | C2694_Nucleus_Anulus_Smooth_Hep2_Fibroblast_Meningeal_myxofibrosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
annulus pulposus cell | 3.19e-45 | 2 |
nucleus pulposus cell of intervertebral disc | 1.98e-30 | 3 |
central nervous system pericyte | 3.24e-12 | 2 |
pericyte cell | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 7.40e-71 | 5 |
symphysis | 7.40e-71 | 5 |
nonsynovial joint | 7.40e-71 | 5 |
fibrous joint | 7.40e-71 | 5 |
cartilaginous joint | 7.40e-71 | 5 |
developing mesenchymal condensation | 7.40e-71 | 5 |
pre-cartilage condensation | 7.40e-71 | 5 |
cartilaginous condensation | 7.40e-71 | 5 |
cartilage element | 7.40e-71 | 5 |
post-cranial axial skeletal system | 7.40e-71 | 5 |
vertebral column | 7.40e-71 | 5 |
intervertebral disk | 7.40e-71 | 5 |
intervertebral joint | 7.40e-71 | 5 |
annulus fibrosus | 3.19e-45 | 2 |
fibrocartilage | 3.19e-45 | 2 |
annulus fibrosus disci intervertebralis | 3.19e-45 | 2 |
articulation | 1.45e-44 | 8 |
skeletal joint | 1.45e-44 | 8 |
articular system | 1.45e-44 | 8 |
cartilage tissue | 1.47e-30 | 3 |
skeletal tissue | 1.47e-30 | 3 |
nucleus pulposus | 1.98e-30 | 3 |
axial mesoderm | 1.98e-30 | 3 |
notochord | 1.98e-30 | 3 |
chordamesoderm | 1.98e-30 | 3 |
subdivision of skeletal system | 1.38e-22 | 16 |
axial skeletal system | 2.68e-07 | 14 |