FFCP PHASE1:Hg19::chr2:237683020..237683029,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:237683020..237683029,+ | |||
|coexpression_cluster_id=C323 | |coexpression_cluster_id=C323 | ||
|description=CAGE_peak_at_chr2:237683020..237683029,+ | |description=CAGE_peak_at_chr2:237683020..237683029,+ | ||
|id=chr2:237683020..237683029,+ | |id=chr2:237683020..237683029,+ | ||
|ontology_enrichment_celltype=CL:0000349!2.21e-43!3;CL:0002577!2.21e-43!3;CL:0002541!7.00e-43!3;CL:0002536!8.05e-30!2;CL:0002537!2.67e-12!5 | |ontology_enrichment_celltype=CL:0000349!2.21e-43!3;CL:0002577!2.21e-43!3;CL:0002541!7.00e-43!3;CL:0002536!8.05e-30!2;CL:0002537!2.67e-12!5 | ||
|ontology_enrichment_celltype_v019=CL:0002536;3.58e-57;2!CL:0000349;2.77e-53;19!CL:0002577;1.49e-38;3!CL:0002541;4.67e-38;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002536,3.58e-57,2;CL:0000349,2.77e-53,19;CL:0002577,1.49e-38,3;CL:0002541,4.67e-38,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!5.97e-100!14;UBERON:0000158!5.97e-100!14;UBERON:0003124!2.09e-72!7;UBERON:0000478!4.99e-58!24;UBERON:0000476!7.00e-43!3;UBERON:0000920!7.00e-43!3;UBERON:0000305!6.98e-33!7;UBERON:0001987!9.55e-33!4;UBERON:0004340!9.55e-33!4;UBERON:0004871!7.85e-29!8;UBERON:0004923!5.91e-24!57;UBERON:0005795!1.17e-10!22 | |ontology_enrichment_uberon=UBERON:0005631!5.97e-100!14;UBERON:0000158!5.97e-100!14;UBERON:0003124!2.09e-72!7;UBERON:0000478!4.99e-58!24;UBERON:0000476!7.00e-43!3;UBERON:0000920!7.00e-43!3;UBERON:0000305!6.98e-33!7;UBERON:0001987!9.55e-33!4;UBERON:0004340!9.55e-33!4;UBERON:0004871!7.85e-29!8;UBERON:0004923!5.91e-24!57;UBERON:0005795!1.17e-10!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;3.13e-45;10!UBERON:0000158;3.13e-45;10!UBERON:0000478;2.66e-42;24!UBERON:0003124;4.67e-38;3!UBERON:0000920;4.67e-38;3!UBERON:0001987;3.16e-29;4!UBERON:0000305;3.42e-17;7!UBERON:0004923;2.21e-08;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.33e-72,14;UBERON:0000158,4.33e-72,14;UBERON:0003124,2.99e-64,7;UBERON:0000478,2.66e-42,24;UBERON:0000920,4.67e-38,3;UBERON:0001987,3.16e-29,4;UBERON:0004340,3.16e-29,4;UBERON:0000305,3.42e-17,7;UBERON:0004923,1.22e-15,66;UBERON:0004871,3.53e-15,8 | |||
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|short_description=p@chr2:237683020..237683029,+ | |short_description=p@chr2:237683020..237683029,+ | ||
}} | }} |
Latest revision as of 08:08, 29 July 2015
Short description: | p@chr2:237683020..237683029, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:237683020..237683029, + |
Coexpression cluster: | C323_Placental_Amniotic_neuroblastoma_amniotic_chorionic_hairy_locus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amniotic epithelial cell | 3.58e-57 | 2 |
extraembryonic cell | 2.77e-53 | 19 |
placental epithelial cell | 1.49e-38 | 3 |
chorionic membrane mesenchymal stem cell | 4.67e-38 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.33e-72 | 14 |
membranous layer | 4.33e-72 | 14 |
chorion | 2.99e-64 | 7 |
extraembryonic structure | 2.66e-42 | 24 |
egg chorion | 4.67e-38 | 3 |
placenta | 3.16e-29 | 4 |
allantois | 3.16e-29 | 4 |
amnion | 3.42e-17 | 7 |
organ component layer | 1.22e-15 | 66 |
somatic layer of lateral plate mesoderm | 3.53e-15 | 8 |