FFCP PHASE1:Hg19::chr2:237677787..237677800,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:237677787..237677800,+ | |||
|description=CAGE_peak_at_chr2:237677787..237677800,+ | |description=CAGE_peak_at_chr2:237677787..237677800,+ | ||
|id=chr2:237677787..237677800,+ | |id=chr2:237677787..237677800,+ | ||
|ontology_enrichment_celltype=CL:0000064!1.02e-12!3;CL:0005012!1.02e-12!3;CL:0000067!1.02e-12!3;CL:0002304!1.02e-12!3;CL:0000221!5.59e-10!71;CL:0000133!1.18e-09!59;CL:0000243!4.55e-09!15;CL:0000125!4.55e-09!15;CL:0000030!4.55e-09!15;CL:0000339!4.55e-09!15;CL:0000306!6.51e-09!4;CL:0002222!6.51e-09!4;CL:0002224!6.51e-09!4;CL:0002536!1.03e-08!2;CL:0000095!5.16e-08!17;CL:0000123!5.16e-08!17;CL:0000075!1.34e-07!27 | |ontology_enrichment_celltype=CL:0000064!1.02e-12!3;CL:0005012!1.02e-12!3;CL:0000067!1.02e-12!3;CL:0002304!1.02e-12!3;CL:0000221!5.59e-10!71;CL:0000133!1.18e-09!59;CL:0000243!4.55e-09!15;CL:0000125!4.55e-09!15;CL:0000030!4.55e-09!15;CL:0000339!4.55e-09!15;CL:0000306!6.51e-09!4;CL:0002222!6.51e-09!4;CL:0002224!6.51e-09!4;CL:0002536!1.03e-08!2;CL:0000095!5.16e-08!17;CL:0000123!5.16e-08!17;CL:0000075!1.34e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000064;1.10e-66;3!CL:0000067;1.10e-66;3!CL:0005012;1.10e-66;3!CL:0002304;1.10e-66;3!CL:0002577;1.58e-30;3!CL:0000075;1.64e-13;27!CL:0000710;1.13e-10;20!CL:0002564;1.35e-08;3!CL:0000306;9.36e-07;4!CL:0002222;9.36e-07;4!CL:0002224;9.36e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,9.82e-67,3;CL:0000067,9.82e-67,3;CL:0005012,9.82e-67,3;CL:0002304,9.82e-67,3;CL:0002577,1.71e-30,3;CL:0000075,1.59e-13,27;CL:0000710,1.12e-10,20;CL:0002564,1.21e-08,3;CL:0000306,9.11e-07,4;CL:0002222,9.11e-07,4;CL:0002224,9.11e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3093!4.67e-07!11 | |ontology_enrichment_disease=DOID:3093!4.67e-07!11 | ||
|ontology_enrichment_disease_v019=DOID:5662;4.59e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,5.13e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0007625!3.32e-16!11;UBERON:0000488!4.28e-16!4;UBERON:0001778!1.02e-12!3;UBERON:0001775!1.02e-12!3;UBERON:0001801!1.70e-12!14;UBERON:0002200!6.18e-12!11;UBERON:0006876!6.18e-12!11;UBERON:0002203!9.90e-11!6;UBERON:0001768!9.90e-11!6;UBERON:0005631!3.83e-09!14;UBERON:0000158!3.83e-09!14;UBERON:0000019!6.39e-09!19;UBERON:0000047!6.39e-09!19;UBERON:0004088!6.39e-09!19;UBERON:0003072!6.39e-09!19;UBERON:0003071!6.39e-09!19;UBERON:0004128!6.39e-09!19;UBERON:0010077!6.51e-09!4;UBERON:0005389!6.51e-09!4;UBERON:0000484!6.51e-09!4;UBERON:0002546!6.51e-09!4;UBERON:0000965!6.51e-09!4;UBERON:0001803!6.51e-09!4;UBERON:0003073!6.51e-09!4;UBERON:0005426!6.51e-09!4;UBERON:0003124!9.31e-09!7;UBERON:0000970!2.02e-08!20;UBERON:0002104!5.73e-08!21;UBERON:0001456!5.73e-08!21;UBERON:0000020!3.50e-07!23;UBERON:0005085!4.07e-07!29;UBERON:0001032!7.70e-07!24;UBERON:0004456!7.70e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;1.10e-66;3!UBERON:0001775;1.10e-66;3!UBERON:0000488;2.87e-50;4!UBERON:0002203;7.94e-34;6!UBERON:0001768;7.94e-34;6!UBERON:0002200;7.94e-34;6!UBERON:0007625;2.06e-32;11!UBERON:0001801;1.35e-25;14!UBERON:0001987;3.48e-23;4!UBERON:0000019;5.29e-19;19!UBERON:0000047;5.29e-19;19!UBERON:0004088;5.29e-19;19!UBERON:0010230;5.29e-19;19!UBERON:0006876;7.91e-19;11!UBERON:0000970;4.45e-18;20!UBERON:0002104;3.06e-17;21!UBERON:0001456;3.06e-17;21!UBERON:0000020;8.78e-16;23!UBERON:0001032;3.82e-15;24!UBERON:0004456;3.82e-15;24!UBERON:0010371;3.21e-11;31!UBERON:0002242;1.35e-08;3!UBERON:0010077;9.36e-07;4!UBERON:0005389;9.36e-07;4!UBERON:0000484;9.36e-07;4!UBERON:0000965;9.36e-07;4!UBERON:0001803;9.36e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,9.82e-67,3;UBERON:0001775,9.82e-67,3;UBERON:0000488,2.64e-50,4;UBERON:0002203,7.51e-34,6;UBERON:0001768,7.51e-34,6;UBERON:0002200,7.51e-34,6;UBERON:0007625,1.90e-32,11;UBERON:0001801,1.27e-25,14;UBERON:0001987,3.68e-23,4;UBERON:0004340,3.68e-23,4;UBERON:0006876,7.68e-19,11;UBERON:0000019,4.26e-18,20;UBERON:0000047,4.26e-18,20;UBERON:0010312,4.26e-18,20;UBERON:0004088,4.26e-18,20;UBERON:0010230,4.26e-18,20;UBERON:0003072,4.26e-18,20;UBERON:0004128,4.26e-18,20;UBERON:0003071,4.26e-18,20;UBERON:0000970,2.93e-17,21;UBERON:0002104,2.93e-17,21;UBERON:0001456,1.70e-16,22;UBERON:0000020,3.68e-15,24;UBERON:0001032,3.68e-15,24;UBERON:0004456,3.68e-15,24;UBERON:0003124,1.08e-13,7;UBERON:0005085,7.79e-12,31;UBERON:0002242,1.21e-08,3;UBERON:0003068,1.21e-08,3;UBERON:0002328,1.21e-08,3;UBERON:0004880,1.21e-08,3;UBERON:0001444,1.28e-07,49;UBERON:0005631,2.60e-07,14;UBERON:0000158,2.60e-07,14;UBERON:0010077,9.11e-07,4;UBERON:0005389,9.11e-07,4;UBERON:0000484,9.11e-07,4;UBERON:0002546,9.11e-07,4;UBERON:0000965,9.11e-07,4;UBERON:0001803,9.11e-07,4;UBERON:0003073,9.11e-07,4;UBERON:0005426,9.11e-07,4 | |||
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| ||
|short_description=p@chr2:237677787..237677800,+ | |short_description=p@chr2:237677787..237677800,+ | ||
}} | }} |
Latest revision as of 08:08, 29 July 2015
Short description: | p@chr2:237677787..237677800, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:237677787..237677800, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 9.82e-67 | 3 |
ciliated epithelial cell | 9.82e-67 | 3 |
multi-ciliated epithelial cell | 9.82e-67 | 3 |
non-pigmented ciliary epithelial cell | 9.82e-67 | 3 |
placental epithelial cell | 1.71e-30 | 3 |
columnar/cuboidal epithelial cell | 1.59e-13 | 27 |
neurecto-epithelial cell | 1.12e-10 | 20 |
nucleus pulposus cell of intervertebral disc | 1.21e-08 | 3 |
crystallin accumulating cell | 9.11e-07 | 4 |
vertebrate lens cell | 9.11e-07 | 4 |
lens epithelial cell | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 5.13e-23 | 1 |