FFCP PHASE1:Hg19::chr2:226378208..226378213,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:226378208..226378213,+ | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_at_chr2:226378208..226378213,+ | |||
|id=chr2:226378208..226378213,+ | |||
|ontology_enrichment_celltype=CL:0002150!1.13e-18!3;CL:0000861!1.13e-18!3;CL:0000066!3.46e-10!254;CL:0002178!5.97e-09!3;CL:1001319!1.18e-07!1;CL:1000600!1.18e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:1001319;2.21e-15;1!CL:1000600;2.21e-15;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,2.06e-15,1;CL:1000600,2.06e-15,1;CL:0000066,3.63e-08,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.81e-48;29!UBERON:0006595;6.75e-11;86 | |||
|ontology_enrichment_disease=DOID:305!2.26e-21!106;DOID:0050687!1.03e-14!143;DOID:162!1.43e-12!235;DOID:14566!3.35e-12!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.24e-21,106;DOID:0050687,1.60e-15,143;DOID:162,1.82e-10,235;DOID:14566,3.21e-10,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.94e-56!9;UBERON:0001557!8.06e-26!19;UBERON:0008947!1.54e-21!38;UBERON:0003258!1.54e-21!38;UBERON:0000065!8.95e-15!53;UBERON:0001041!6.81e-13!98;UBERON:0000072!3.95e-12!46;UBERON:0004921!1.05e-11!129;UBERON:0004185!1.05e-11!129;UBERON:0001007!2.25e-10!155;UBERON:0001555!2.25e-10!155;UBERON:0007026!2.25e-10!155;UBERON:0000077!2.89e-10!130;UBERON:0001004!2.93e-10!72;UBERON:0004119!3.37e-09!169;UBERON:0000925!3.37e-09!169;UBERON:0006595!3.37e-09!169;UBERON:0004645!1.18e-07!1;UBERON:0001256!1.18e-07!1;UBERON:0001259!1.18e-07!1;UBERON:0001882!4.90e-07!1;UBERON:0005403!4.90e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.97e-126;9!UBERON:0001557;3.97e-126;9!UBERON:0000072;3.04e-34;37!UBERON:0000065;6.01e-28;44!UBERON:0001004;8.91e-16;65!UBERON:0004645;2.21e-15;1!UBERON:0001256;2.21e-15;1!UBERON:0001259;2.21e-15;1!UBERON:0001255;2.40e-08;2!UBERON:0001556;2.40e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.25e-126,9;UBERON:0001557,1.01e-59,19;UBERON:0008947,1.57e-36,38;UBERON:0003258,1.57e-36,38;UBERON:0000072,2.26e-29,47;UBERON:0000065,1.89e-25,54;UBERON:0001041,2.58e-22,87;UBERON:0004921,6.59e-19,118;UBERON:0001004,2.56e-18,74;UBERON:0004645,2.06e-15,1;UBERON:0001256,2.06e-15,1;UBERON:0001259,2.06e-15,1;UBERON:0001007,3.55e-15,145;UBERON:0001555,3.55e-15,145;UBERON:0007026,3.55e-15,145;UBERON:0004119,1.22e-13,160;UBERON:0000925,1.22e-13,160;UBERON:0006595,1.22e-13,160;UBERON:0011216,6.13e-11,223;UBERON:0001048,1.25e-09,160;UBERON:0001255,2.31e-08,2;UBERON:0001556,2.31e-08,2 | |||
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|short_description=p@chr2:226378208..226378213,+ | |||
}} | }} |
Latest revision as of 07:17, 29 July 2015
Short description: | p@chr2:226378208..226378213, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:226378208..226378213, + |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 2.06e-15 | 1 |
lower urinary tract cell | 2.06e-15 | 1 |
epithelial cell | 3.63e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.25e-126 | 9 |
upper respiratory tract | 1.01e-59 | 19 |
respiratory primordium | 1.57e-36 | 38 |
endoderm of foregut | 1.57e-36 | 38 |
segment of respiratory tract | 2.26e-29 | 47 |
respiratory tract | 1.89e-25 | 54 |
foregut | 2.58e-22 | 87 |
subdivision of digestive tract | 6.59e-19 | 118 |
respiratory system | 2.56e-18 | 74 |
urinary bladder urothelium | 2.06e-15 | 1 |
wall of urinary bladder | 2.06e-15 | 1 |
mucosa of urinary bladder | 2.06e-15 | 1 |
digestive system | 3.55e-15 | 145 |
digestive tract | 3.55e-15 | 145 |
primitive gut | 3.55e-15 | 145 |
endoderm-derived structure | 1.22e-13 | 160 |
endoderm | 1.22e-13 | 160 |
presumptive endoderm | 1.22e-13 | 160 |
organ system subdivision | 6.13e-11 | 223 |
primordium | 1.25e-09 | 160 |
urinary bladder | 2.31e-08 | 2 |
lower urinary tract | 2.31e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.24e-21 | 106 |
cell type cancer | 1.60e-15 | 143 |
cancer | 1.82e-10 | 235 |
disease of cellular proliferation | 3.21e-10 | 239 |