FFCP PHASE1:Hg19::chr2:219866929..219866945,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000441450_5end | |association_with_transcript=0bp_to_ENST00000441450_5end | ||
|cluster_id=chr2:219866929..219866945,+ | |||
|coexpression_cluster_id=C732 | |coexpression_cluster_id=C732 | ||
|description=CAGE_peak_1_at_ENST00000441450_5end | |description=CAGE_peak_1_at_ENST00000441450_5end | ||
|id=chr2:219866929..219866945,+ | |id=chr2:219866929..219866945,+ | ||
|ontology_enrichment_celltype=CL:0000242!1.01e-13!2;CL:0002553!1.44e-07!1;CL:0000167!1.74e-07!1;CL:0000164!1.74e-07!1;CL:0000502!1.74e-07!1;CL:0000172!1.74e-07!1;CL:0000173!1.74e-07!1;CL:0002351!1.74e-07!1 | |ontology_enrichment_celltype=CL:0000242!1.01e-13!2;CL:0002553!1.44e-07!1;CL:0000167!1.74e-07!1;CL:0000164!1.74e-07!1;CL:0000502!1.74e-07!1;CL:0000172!1.74e-07!1;CL:0000173!1.74e-07!1;CL:0002351!1.74e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.57e-37;2!CL:0000242;1.57e-37;2!CL:0002553;2.97e-19;1!CL:0000167;5.13e-19;1!CL:0000164;5.13e-19;1!CL:0000502;5.13e-19;1!CL:0000172;5.13e-19;1!CL:0000173;5.13e-19;1!CL:0000312;1.13e-15;5!CL:0000240;3.14e-13;6!CL:0000311;3.14e-13;6!CL:0000079;3.14e-13;6!CL:0000237;3.14e-13;6!CL:0002535;1.98e-10;2!CL:0000362;3.92e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.57e-37,2;CL:0002553,2.71e-19,1;CL:0000167,4.69e-19,1;CL:0000164,4.69e-19,1;CL:0000502,4.69e-19,1;CL:0000172,4.69e-19,1;CL:0000173,4.69e-19,1;CL:0002351,4.69e-19,1;CL:0000312,1.13e-15,5;CL:0000240,3.14e-13,6;CL:0000311,3.14e-13,6;CL:0000079,3.14e-13,6;CL:0000237,3.14e-13,6;CL:0000036,3.14e-13,6;CL:0000357,3.14e-13,6;CL:0000114,3.14e-13,6;CL:0002535,2.07e-10,2;CL:0000362,3.92e-09,9 | |||
|ontology_enrichment_development_v019=CL:0002351;5.13e-19;1!CL:0000357;3.14e-13;6!CL:0000114;3.14e-13;6 | |||
|ontology_enrichment_disease=DOID:305!3.67e-11!106;DOID:0050687!4.24e-11!143;DOID:4430!1.74e-07!1;DOID:3119!3.49e-07!14;DOID:5409!5.52e-07!4;DOID:162!8.88e-07!235 | |ontology_enrichment_disease=DOID:305!3.67e-11!106;DOID:0050687!4.24e-11!143;DOID:4430!1.74e-07!1;DOID:3119!3.49e-07!14;DOID:5409!5.52e-07!4;DOID:162!8.88e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:4430;5.13e-19;1!DOID:3119;2.84e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,4.69e-19,1;DOID:3119,2.84e-12,14;DOID:305,1.86e-10,106;DOID:0050687,1.21e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0000007!1.66e-13!2;UBERON:0001831!2.52e-07!1;UBERON:0001567!2.52e-07!1;UBERON:0008801!2.52e-07!1;UBERON:0003296!3.63e-07!4;UBERON:0010133!3.63e-07!4 | |ontology_enrichment_uberon=UBERON:0000007!1.66e-13!2;UBERON:0001831!2.52e-07!1;UBERON:0001567!2.52e-07!1;UBERON:0008801!2.52e-07!1;UBERON:0003296!3.63e-07!4;UBERON:0010133!3.63e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;6.83e-37;2!UBERON:0003296;5.15e-19;4!UBERON:0010133;5.15e-19;4!UBERON:0001894;2.69e-11;7!UBERON:0006955;1.98e-10;2!UBERON:0004801;1.98e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,6.83e-37,2;UBERON:0003296,5.15e-19,4;UBERON:0010133,5.15e-19,4;UBERON:0001894,2.69e-11,7;UBERON:0006222,2.69e-11,7;UBERON:0006955,2.07e-10,2;UBERON:0004801,2.07e-10,2 | |||
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|short_description=p1@ENST00000441450 | |short_description=p1@ENST00000441450 | ||
}} | }} |
Latest revision as of 06:47, 29 July 2015
Short description: | p1@ENST00000441450 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000441450_5end |
Coexpression cluster: | C732_small_merkel_nonsmall_argyrophil_neuroblastoma_acute_carcinoid |
Association with transcript: | 0bp_to_ENST00000441450_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.57e-37 | 2 |
lung fibroblast | 2.71e-19 | 1 |
peptide hormone secreting cell | 4.69e-19 | 1 |
enteroendocrine cell | 4.69e-19 | 1 |
type D enteroendocrine cell | 4.69e-19 | 1 |
somatostatin secreting cell | 4.69e-19 | 1 |
pancreatic D cell | 4.69e-19 | 1 |
progenitor cell of endocrine pancreas | 4.69e-19 | 1 |
keratinocyte | 1.13e-15 | 5 |
stratified squamous epithelial cell | 3.14e-13 | 6 |
keratin accumulating cell | 3.14e-13 | 6 |
stratified epithelial cell | 3.14e-13 | 6 |
keratinizing barrier epithelial cell | 3.14e-13 | 6 |
epithelial fate stem cell | 3.14e-13 | 6 |
stratified epithelial stem cell | 3.14e-13 | 6 |
surface ectodermal cell | 3.14e-13 | 6 |
epithelial cell of cervix | 2.07e-10 | 2 |
epidermal cell | 3.92e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 6.83e-37 | 2 |
gland of diencephalon | 5.15e-19 | 4 |
neuroendocrine gland | 5.15e-19 | 4 |
diencephalon | 2.69e-11 | 7 |
future diencephalon | 2.69e-11 | 7 |
uterine epithelium | 2.07e-10 | 2 |
cervix epithelium | 2.07e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 4.69e-19 | 1 |
gastrointestinal system cancer | 2.84e-12 | 14 |
carcinoma | 1.86e-10 | 106 |
cell type cancer | 1.21e-09 | 143 |