FFCP PHASE1:Hg19::chr2:211512735..211512749,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:211512735..211512749,+ | |||
|coexpression_cluster_id=C768 | |||
|description=CAGE_peak_at_chr2:211512735..211512749,+ | |description=CAGE_peak_at_chr2:211512735..211512749,+ | ||
|id=chr2:211512735..211512749,+ | |id=chr2:211512735..211512749,+ | ||
|ontology_enrichment_celltype=CL:0002150!3.17e-12!3;CL:0000861!3.17e-12!3 | |ontology_enrichment_celltype=CL:0002150!3.17e-12!3;CL:0000861!3.17e-12!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.58e-08,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.50e-41;29 | |||
|ontology_enrichment_disease=DOID:305!1.93e-11!106;DOID:0050687!5.67e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.47e-18,106;DOID:0050687,4.58e-13,143;DOID:162,3.07e-07,235;DOID:14566,4.72e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.29e-34!9;UBERON:0001557!3.95e-15!19;UBERON:0008947!5.69e-12!38;UBERON:0003258!5.69e-12!38;UBERON:0001007!1.47e-09!155;UBERON:0001555!1.47e-09!155;UBERON:0007026!1.47e-09!155;UBERON:0000072!2.03e-09!46;UBERON:0004921!2.04e-09!129;UBERON:0004185!2.04e-09!129;UBERON:0004119!2.85e-08!169;UBERON:0000925!2.85e-08!169;UBERON:0006595!2.85e-08!169;UBERON:0000065!7.87e-08!53;UBERON:0000077!1.60e-07!130;UBERON:0001041!4.03e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.43e-110;9!UBERON:0001557;2.43e-110;9!UBERON:0000072;1.95e-29;37!UBERON:0000065;2.85e-24;44!UBERON:0001004;6.83e-11;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.47e-110,9;UBERON:0001557,5.20e-52,19;UBERON:0008947,1.50e-31,38;UBERON:0003258,1.50e-31,38;UBERON:0000072,2.63e-25,47;UBERON:0000065,6.96e-22,54;UBERON:0001041,3.03e-19,87;UBERON:0004921,3.76e-16,118;UBERON:0001004,1.16e-15,74;UBERON:0001007,7.28e-13,145;UBERON:0001555,7.28e-13,145;UBERON:0007026,7.28e-13,145;UBERON:0004119,1.64e-11,160;UBERON:0000925,1.64e-11,160;UBERON:0006595,1.64e-11,160;UBERON:0001048,9.03e-10,160;UBERON:0011216,1.16e-07,223 | |||
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| ||
|short_description=p@chr2:211512735..211512749,+ | |short_description=p@chr2:211512735..211512749,+ | ||
}} | }} |
Latest revision as of 05:45, 29 July 2015
Short description: | p@chr2:211512735..211512749, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:211512735..211512749, + |
Coexpression cluster: | C768_Hepatocyte_liver_cervical_Hep2_epitheloid_large_nonsmall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.58e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.47e-110 | 9 |
upper respiratory tract | 5.20e-52 | 19 |
respiratory primordium | 1.50e-31 | 38 |
endoderm of foregut | 1.50e-31 | 38 |
segment of respiratory tract | 2.63e-25 | 47 |
respiratory tract | 6.96e-22 | 54 |
foregut | 3.03e-19 | 87 |
subdivision of digestive tract | 3.76e-16 | 118 |
respiratory system | 1.16e-15 | 74 |
digestive system | 7.28e-13 | 145 |
digestive tract | 7.28e-13 | 145 |
primitive gut | 7.28e-13 | 145 |
endoderm-derived structure | 1.64e-11 | 160 |
endoderm | 1.64e-11 | 160 |
presumptive endoderm | 1.64e-11 | 160 |
primordium | 9.03e-10 | 160 |
organ system subdivision | 1.16e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.47e-18 | 106 |
cell type cancer | 4.58e-13 | 143 |
cancer | 3.07e-07 | 235 |
disease of cellular proliferation | 4.72e-07 | 239 |