FFCP PHASE1:Hg19::chr2:189861210..189861232,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:189861210..189861232,- | |||
|coexpression_cluster_id=C1051 | |coexpression_cluster_id=C1051 | ||
|description=CAGE_peak_at_chr2:189861210..189861232,- | |description=CAGE_peak_at_chr2:189861210..189861232,- | ||
|id=chr2:189861210..189861232,- | |id=chr2:189861210..189861232,- | ||
|ontology_enrichment_celltype=CL:0000135;2.07e-08;3!CL:0000388;2.07e-08;3!CL:0000188;5.92e-08;9!CL:0000499;1.31e-07;28!CL:0002564;3.88e-07;3!CL:0000723;7.49e-07;61 | |ontology_enrichment_celltype=CL:0000055!2.10e-20!180;CL:0000057!5.63e-13!75;CL:0000680!1.82e-11!57;CL:0000056!1.82e-11!57;CL:0000355!1.82e-11!57;CL:0000187!6.68e-11!54;CL:0000183!1.14e-10!59;CL:0000393!1.29e-09!60;CL:0000211!1.29e-09!60;CL:0002334!3.47e-08!12;CL:0000048!2.89e-07!430;CL:0000188!6.88e-07!9;CL:0000723!9.28e-07!436 | ||
| | |ontology_enrichment_celltype_v019=CL:0000135;2.07e-08;3!CL:0000388;2.07e-08;3!CL:0000188;5.92e-08;9!CL:0000499;1.31e-07;28!CL:0002564;3.88e-07;3!CL:0000723;7.49e-07;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.40e-09,58;CL:0000056,3.40e-09,58;CL:0000355,3.40e-09,58;CL:0000187,6.41e-09,55;CL:0000135,2.09e-08,3;CL:0000388,2.09e-08,3;CL:0000188,1.26e-07,9;CL:0000499,1.28e-07,28;CL:0000393,1.35e-07,61;CL:0000211,1.35e-07,61;CL:0000048,4.35e-07,427;CL:0002564,4.59e-07,3;CL:0000723,8.91e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0004905;6.50e-13;8!UBERON:0000982;6.50e-13;8!UBERON:0004770;6.50e-13;8!UBERON:0011135;3.97e-11;5!UBERON:0002216;3.97e-11;5!UBERON:0011134;3.97e-11;5!UBERON:0002209;3.97e-11;5!UBERON:0002213;3.97e-11;5!UBERON:0007844;3.97e-11;5!UBERON:0011138;3.97e-11;5!UBERON:0001130;3.97e-11;5!UBERON:0001066;3.97e-11;5!UBERON:0001468;3.97e-11;5!UBERON:0001134;3.98e-09;16!UBERON:0002036;3.98e-09;16!UBERON:0007846;2.07e-08;3!UBERON:0000043;2.07e-08;3!UBERON:0007845;2.07e-08;3!UBERON:0002204;2.68e-08;70!UBERON:0001013;2.92e-08;14!UBERON:0002385;5.08e-08;31!UBERON:0001015;5.08e-08;31!UBERON:0000383;5.08e-08;31!UBERON:0002242;3.88e-07;3 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!8.25e-13!63;UBERON:0001015!8.25e-13!63;UBERON:0000383!8.25e-13!63;UBERON:0000914!4.45e-12!83;UBERON:0002329!4.45e-12!83;UBERON:0003077!4.45e-12!83;UBERON:0003059!4.45e-12!83;UBERON:0007282!4.45e-12!83;UBERON:0009618!4.45e-12!83;UBERON:0007285!4.45e-12!83;UBERON:0001134!5.32e-12!61;UBERON:0002036!5.32e-12!61;UBERON:0003082!5.32e-12!61;UBERON:0004290!2.33e-11!70;UBERON:0000486!1.25e-09!82;UBERON:0005256!3.38e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;6.50e-13;8!UBERON:0000982;6.50e-13;8!UBERON:0004770;6.50e-13;8!UBERON:0011135;3.97e-11;5!UBERON:0002216;3.97e-11;5!UBERON:0011134;3.97e-11;5!UBERON:0002209;3.97e-11;5!UBERON:0002213;3.97e-11;5!UBERON:0007844;3.97e-11;5!UBERON:0011138;3.97e-11;5!UBERON:0001130;3.97e-11;5!UBERON:0001066;3.97e-11;5!UBERON:0001468;3.97e-11;5!UBERON:0001134;3.98e-09;16!UBERON:0002036;3.98e-09;16!UBERON:0007846;2.07e-08;3!UBERON:0000043;2.07e-08;3!UBERON:0007845;2.07e-08;3!UBERON:0002204;2.68e-08;70!UBERON:0001013;2.92e-08;14!UBERON:0002385;5.08e-08;31!UBERON:0001015;5.08e-08;31!UBERON:0000383;5.08e-08;31!UBERON:0002242;3.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,5.21e-13,8;UBERON:0000982,5.21e-13,8;UBERON:0004770,5.21e-13,8;UBERON:0011135,4.64e-11,5;UBERON:0002216,4.64e-11,5;UBERON:0011134,4.64e-11,5;UBERON:0002209,4.64e-11,5;UBERON:0002213,4.64e-11,5;UBERON:0005856,4.64e-11,5;UBERON:0005866,4.64e-11,5;UBERON:0005863,4.64e-11,5;UBERON:0007844,4.64e-11,5;UBERON:0011138,4.64e-11,5;UBERON:0001130,4.64e-11,5;UBERON:0001066,4.64e-11,5;UBERON:0001468,4.64e-11,5;UBERON:0003104,1.58e-10,160;UBERON:0009142,1.58e-10,160;UBERON:0001134,1.78e-10,62;UBERON:0002036,1.78e-10,62;UBERON:0003082,1.78e-10,62;UBERON:0007524,4.97e-10,73;UBERON:0002385,5.64e-10,64;UBERON:0001015,5.64e-10,64;UBERON:0000383,5.64e-10,64;UBERON:0002329,1.61e-09,71;UBERON:0003059,1.61e-09,71;UBERON:0007282,1.61e-09,71;UBERON:0004290,1.61e-09,71;UBERON:0009618,1.61e-09,71;UBERON:0003077,2.62e-09,72;UBERON:0007285,2.62e-09,72;UBERON:0000486,3.29e-09,83;UBERON:0001013,1.38e-08,14;UBERON:0005256,1.82e-08,122;UBERON:0007846,2.09e-08,3;UBERON:0000043,2.09e-08,3;UBERON:0007845,2.09e-08,3;UBERON:0007503,3.67e-08,78;UBERON:0002242,4.59e-07,3;UBERON:0003068,4.59e-07,3;UBERON:0002328,4.59e-07,3;UBERON:0004880,4.59e-07,3;UBERON:0000490,6.12e-07,148 | |||
|phase1_expression=0,1.49870366723688,0.563817616383885,2.00146596706261,2.23480547213644,1.74467704820074,2.53299878168311,0.631719873426831,0.783556884599516,0,0,0.436882744260345,0.791300934685361,3.34169152992126,2.31978163009541,0.672325146451775,0.602694528023977,0,0,0,0,0.313454721478088,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69490601792545,2.30152611318355,1.0843174571537,0,2.31754430337318,0,0.973269740605272,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.886413581652058,0.264818361626438,1.72101972449288,0,0.560677600142307,0,0.74000264525148,0,1.48181739276657,1.63461903113459,0.756787138224657,0.576175924479999,0,0,0,0,0.352303495931295,0.323745888736263,0,0,0,0.309977343527296,0,1.7308685049499,0,1.43723628363248,0.168336113954066,0,0,0,0.612975591598039,0.300476117813194,1.58805056424029,0,0.85422955527427,0.635795703478686,0.300091096084402,0,0.257640540045629,0.37223371266318,0.337552664482532,0.389748020644795,0.252433774244115,0.552299391853796,0.484938170456436,0,0,0.169560592310488,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,3.21620469096443,0,2.3218396401599,1.44375896333917,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.8231480226628,4.41026134156626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.22001485746285,0.129271715757778,0,1.690605505112,1.32969058292435,0,0,0,0,6.29103172095849,13.0229185293946,0,2.93162565864362,10.3063665135338,2.37585561880029,0,0,0.599837947092342,0,0,0,0.479249710983165,1.14861935834114,0,0.289562613335158,1.02738161275192,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,2.4538298343828,2.00068208423871,1.35632511849868,11.854339107256,5.53129865271201,5.99269177128952,0.35142424497814,0,0,0,0.664225598535437,0,0.0868836144680828,0.587403472388222,0.343143423810856,0,0,0,0.606255142892519,0,0.907170879989041,0.248107807818777,0.306923946576125,0.841980283299221,0.896974044789907,0,1.28683136914886,1.48418066444991,1.3878872442239,0.887808626565635,0.328508624055237,1.55776328755086,1.74315567689939,0,0,0,1.49258782613989,3.09554985611419,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.580024309752732,1.07834031980251,1.5350367472613,1.10269257987624,0.751941714077915,3.33538396002726,1.02271952899321,4.45160178233687,0,0,0,0,0,1.5740617341532,0,1.23213432070436,0,0,0,0.143124886741991,0.372158369359667,0,0.762520775695299,0.511795582622668,0,0.318203247925937,0,1.2591072030832,4.94166653524899,0.942499218765491,0,0,0.421258456238981,0,3.41198885483798,0,1.36499911407986,3.25232493493539,1.13008116620243,0,0,0,0,3.9353685122798,0,0.6196469961995,0.281695602532241,1.14729081763241,3.04572027140676,0,0,1.68886108238131,6.25660296623814,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0,0,0,0,1.39473591775749,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.230850775511391,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0,4.01288823649394,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.19755703795225,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0,0.837847203816763,0,0,0.399358000997982,0,0,0.201550417460179,3.96329871896644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.209818352539992,0,0,0,0,0,0,0.542999601753713,0,1.95952416065645,0,0,0.681552087141687,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34329322598187,1.63599316893057,2.21922344601045,0.378806010550178,2.26411111577318,0,0.457680136793847,1.51230923763239,1.5543720058278,0.591420599958536,0.796483835818512,0,1.24210365501008,0.829412415681711,0.53168342911599,0,9.31597175782754,1.14241563650639,0,1.45478927362048,1.50374779859484,0,0.796191777397232,0,0,0,0,0.192619830407303,0,0,0,0,0.244736704506468,0,0,1.09642024789354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,1.05802783107205,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0.795664888465099,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,0.280272163313789,0.913158720509496,0,0,0.0714765441766563,0,0.348724276104376,0.521574816907738,1.60342272946051,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0.118920090777569,0,0,0,0.154348316215889,5.68254857310289,0,0.490296643507811,0,0,0,0.4226557275834,0.849635573439084,0,0.644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,10.415860508669,6.00828317220844,13.8440499879613,0,0.109265571963696,0,0,0,0,0,0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| ||
|short_description=p@chr2:189861210..189861232,- | |short_description=p@chr2:189861210..189861232,- | ||
}} | }} |
Latest revision as of 04:15, 29 July 2015
Short description: | p@chr2:189861210..189861232, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:189861210..189861232, - |
Coexpression cluster: | C1051_umbilical_tenocyte_Mesenchymal_mesenchymal_Olfactory_Adipocyte_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.40e-09 | 58 |
myoblast | 3.40e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.40e-09 | 58 |
muscle cell | 6.41e-09 | 55 |
fibrocyte | 2.09e-08 | 3 |
tendon cell | 2.09e-08 | 3 |
cell of skeletal muscle | 1.26e-07 | 9 |
stromal cell | 1.28e-07 | 28 |
electrically responsive cell | 1.35e-07 | 61 |
electrically active cell | 1.35e-07 | 61 |
multi fate stem cell | 4.35e-07 | 427 |
nucleus pulposus cell of intervertebral disc | 4.59e-07 | 3 |
somatic stem cell | 8.91e-07 | 433 |