FFCP PHASE1:Hg19::chr2:175708423..175708427,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:175708423..175708427,- to FFCP PHASE1:Hg19::chr2:175708423..175708427,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:175708423..175708427,- | |||
|coexpression_cluster_id=C1179 | |||
|description=CAGE_peak_at_chr2:175708423..175708427,- | |||
|id=chr2:175708423..175708427,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;6.30e-07;1!DOID:4549;6.30e-07;1!DOID:5861;6.30e-07;1!DOID:6496;6.30e-07;1!DOID:6193;6.30e-07;1!DOID:5662;6.30e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,3.82e-07,1;DOID:4549,3.82e-07,1;DOID:5861,3.82e-07,1;DOID:6496,3.82e-07,1;DOID:6193,4.57e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!6.73e-29!57;UBERON:0005068!6.73e-29!57;UBERON:0006241!6.73e-29!57;UBERON:0007135!6.73e-29!57;UBERON:0001017!1.74e-26!82;UBERON:0005743!2.61e-26!86;UBERON:0000955!5.28e-26!69;UBERON:0006238!5.28e-26!69;UBERON:0002020!9.47e-26!34;UBERON:0003528!9.47e-26!34;UBERON:0001893!1.97e-25!34;UBERON:0002780!2.47e-25!41;UBERON:0001890!2.47e-25!41;UBERON:0006240!2.47e-25!41;UBERON:0000073!4.89e-25!94;UBERON:0001016!4.89e-25!94;UBERON:0002346!7.83e-25!90;UBERON:0001869!1.05e-24!32;UBERON:0002791!1.52e-24!33;UBERON:0003075!2.29e-24!86;UBERON:0007284!2.29e-24!86;UBERON:0003080!2.31e-24!42;UBERON:0002616!3.31e-24!59;UBERON:0003056!3.45e-19!61;UBERON:0000956!1.18e-18!25;UBERON:0000203!1.18e-18!25;UBERON:0000153!1.24e-17!129;UBERON:0007811!1.24e-17!129;UBERON:0000033!2.65e-17!123;UBERON:0002619!2.00e-16!22;UBERON:0000924!6.12e-16!173;UBERON:0006601!6.12e-16!173;UBERON:0004121!2.29e-15!169;UBERON:0001950!1.09e-14!20;UBERON:0007023!1.83e-13!115;UBERON:0002308!1.47e-08!9;UBERON:0000125!1.47e-08!9;UBERON:0000475!2.67e-08!365;UBERON:0009663!2.05e-07!7;UBERON:0002420!3.78e-07!9;UBERON:0007245!3.78e-07!9;UBERON:0010009!3.78e-07!9;UBERON:0010011!3.78e-07!9;UBERON:0000454!3.78e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.99e-37;32!UBERON:0000956;6.90e-36;25!UBERON:0000203;6.90e-36;25!UBERON:0002619;6.08e-35;22!UBERON:0002791;1.53e-34;32!UBERON:0001950;2.68e-32;20!UBERON:0001893;7.41e-31;34!UBERON:0003528;6.21e-30;34!UBERON:0002020;6.21e-30;34!UBERON:0002780;4.15e-27;41!UBERON:0001890;4.15e-27;41!UBERON:0001870;1.91e-18;3!UBERON:0000200;3.56e-16;6!UBERON:0000073;1.26e-15;53!UBERON:0002616;1.26e-15;53!UBERON:0002702;3.08e-13;2!UBERON:0002021;1.76e-11;5!UBERON:0001017;4.32e-10;75!UBERON:0000955;3.97e-09;68!UBERON:0005383;4.76e-09;3!UBERON:0005382;4.76e-09;3!UBERON:0001016;1.89e-08;83!UBERON:0001871;4.21e-08;6!UBERON:0001874;1.86e-07;1!UBERON:0003112;2.92e-07;1!UBERON:0011158;2.92e-07;1!UBERON:0003128;2.92e-07;1!UBERON:0001703;2.92e-07;1!UBERON:0002241;2.92e-07;1!UBERON:0000369;5.53e-07;4!UBERON:0002435;5.53e-07;4!UBERON:0000204;5.53e-07;4!UBERON:0000996;6.30e-07;1!UBERON:0007190;6.30e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,2.09e-42,32;UBERON:0001893,8.68e-40,34;UBERON:0002791,2.34e-37,32;UBERON:0002780,6.91e-37,41;UBERON:0001890,6.91e-37,41;UBERON:0003080,6.91e-37,41;UBERON:0006240,6.91e-37,41;UBERON:0000956,6.48e-36,25;UBERON:0000203,6.48e-36,25;UBERON:0002619,4.53e-35,22;UBERON:0003528,4.86e-35,34;UBERON:0002020,4.86e-35,34;UBERON:0001950,2.15e-32,20;UBERON:0001049,1.46e-29,56;UBERON:0005068,1.46e-29,56;UBERON:0006241,1.46e-29,56;UBERON:0007135,1.46e-29,56;UBERON:0000073,7.14e-28,53;UBERON:0002616,7.14e-28,53;UBERON:0003056,8.41e-24,61;UBERON:0001017,2.02e-21,81;UBERON:0000955,1.16e-20,68;UBERON:0006238,1.16e-20,68;UBERON:0003075,4.42e-19,82;UBERON:0007284,4.42e-19,82;UBERON:0001016,6.34e-19,89;UBERON:0001870,9.18e-19,3;UBERON:0002346,5.03e-18,86;UBERON:0000200,4.77e-16,6;UBERON:0010371,2.86e-14,104;UBERON:0002702,2.58e-13,2;UBERON:0010314,7.13e-12,132;UBERON:0002021,1.96e-11,5;UBERON:0011216,9.92e-10,223;UBERON:0004121,3.65e-09,171;UBERON:0000924,3.65e-09,171;UBERON:0006601,3.65e-09,171;UBERON:0005383,4.86e-09,3;UBERON:0005382,4.86e-09,3;UBERON:0007023,1.73e-08,114;UBERON:0001871,4.43e-08,6;UBERON:0000025,7.81e-08,192;UBERON:0001874,1.98e-07,1;UBERON:0003112,3.01e-07,1;UBERON:0011158,3.01e-07,1;UBERON:0003128,3.01e-07,1;UBERON:0001703,3.01e-07,1;UBERON:0002241,3.01e-07,1;UBERON:0004761,3.01e-07,1;UBERON:0009617,3.01e-07,1;UBERON:0004111,4.96e-07,240;UBERON:0000996,5.45e-07,1;UBERON:0000369,5.62e-07,4;UBERON:0002435,5.62e-07,4;UBERON:0000204,5.62e-07,4;UBERON:0010082,5.62e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0.572471974262113,1.09499540058307,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,1.17903228824749,1.23360899399706,0,0,0,0,0,0.294605907474837,0.221533894583621,0,0.128091319725675,0,0,0,0,0,0,0,0,0.383220493601921,0,0.253019692019503,0.318565414324097,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.283604451492204,0.886917589850256,0.263504357079378,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352303495931295,0.485618833104395,0.421352420106746,0,0.491337269247072,0,1.18800285728205,0.989067717114227,0,0,0.336672227908132,0.500474079487857,0,0.877955241761676,0,0.150238058906597,0,0.538168907066586,0,0.211931901159562,0,0.618315175430633,0.515281080091258,0.37223371266318,1.18143432568886,0.194874010322397,0.757301322732344,0.736399189138395,0.323292113637624,0,0.201504196455281,0.339121184620975,0,0,0,0,0,0.232387885739037,0,0.252320850875628,2.55484151353081,0,0,0,0.464367928031979,0.721879481669586,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0.266422179016099,0,0,0.823240336780769,0,0,0,0,0,0.099972991182057,0,0,0,0,1.14861935834114,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0,0,0,0,0,0,0.521301686808497,0,0,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0.308419387605311,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0.0915694648183434,0.330037999682352,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.551346289938122,0.537101224341368,0,0.255679882248303,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0,0,0,0,0.359744915166629,0.274537029736055,0,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.242721043499027,0.445773537109913,0,0,0,0,0,2.81338832821025,0.111308705022906,0.494411622680279,0.63337622438398,0.597743964753209,0,0,0.20453736500431,0,0,0.269605053441981,0,0,0,0,0,0.969332746095218,0.556608588971108,0,0,0,0,0.1137934482855,0,0,1.37897349296586,0,0.520874984799877,0.885741385813839,3.97968247463846,0,0.774054819518572,0.295547618953547,0.219385397153973,0,0,0.307801034015188,0,0,0,0,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,2.07564790076435,0.370691816839509,0.208843899010911,0.067401132980677,0.802577647298789,0,0,0.19566461893209,0,0,1.20990716048664,0.91821828489147,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0.277349346026277,0,0.0979923974143777,0,0.17472666824203,1.37588825977293,0.0967563312890851,0.0730893170861856,0,0,1.6768664071385,0,0,0,1.7727022867646,0,0.0801588202515337,0.640358984218058,0.19980960958213,0,0.114536596165916,0.514784993585894,0,0,0,0.135904206073614,0.104602846312333,0,0,0.600420288709789,0.821432273351958,0,0,0.262887354279314,0.279282401272254,0,0.717873024576814,0,0,0,0.134366944973453,0,0,0,0,0.0674035438541849,0.196854963029498,0,0.795229689809303,2.99647493445466,0.964518890790115,0,1.24632101408756,0,0.77380195455795,0.91124334987037,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0.5085370753095,0,0,0,0,0.082092520749339,0.340776043570843,0.113312091520126,0,0,0.258565912723101,0.79339561045614,0.513260513652988,0,0,0.314408610199332,0,0.496166021811951,0.197611631897944,0,0,0,0,0,0,0.471162288750703,4.43034089983493,0.976210119215705,4.50687350543399,0.573409195690071,0.887432412294818,0.124192805882767,0.276697269872462,0.124980407962107,0,0,0.235265819698172,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0.151230923763239,0,0.295710299979268,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0.406870733204662,0,0,0,0.398095888698616,0.400027764663154,0.343395705182793,0.336749488765919,0,0,0.214441591374926,0,0,0,0.244736704506468,0.179088841081487,0.308801447160972,0,0,0,0,0,0,0,4.00949464840019,0,0,0,0,0,0,0.79994958341972,0,0,0,0,0,0,0.76736622782191,0.754773679776773,0,0.655257829152084,0.169732529954025,0.212574920101683,0.123935764259002,0,0,0.0788617450012534,0,0,0.3062454773532,0.899209151350433,0,6.5449882213432,3.28186182785208,2.01657356977374,0.207471757392654,2.26065903884592,0,0.0981477185010256,0,0,0.231051332300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| ||
|short_description=p@chr2:175708423..175708427,- | |||
}} | }} |
Latest revision as of 02:41, 29 July 2015
Short description: | p@chr2:175708423..175708427, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:175708423..175708427, - |
Coexpression cluster: | C1179_parietal_putamen_occipital_medial_caudate_hippocampus_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 3.82e-07 | 1 |
extraosseous chondrosarcoma | 3.82e-07 | 1 |
myxoid chondrosarcoma | 3.82e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 3.82e-07 | 1 |
epithelioid sarcoma | 4.57e-07 | 1 |