FFCP PHASE1:Hg19::chr2:165701580..165701589,+: Difference between revisions
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|id=chr2:165701580..165701589,+
|short_description=p@chr2:165701580..165701589,+
|description=CAGE_peak_at_chr2:165701580..165701589,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:165701580..165701589,+ | |||
|coexpression_cluster_id=C1882 | |||
|description=CAGE_peak_at_chr2:165701580..165701589,+ | |||
|id=chr2:165701580..165701589,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002149;7.58e-07;6!CL:0002255;7.58e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,7.58e-07,6;CL:0002255,7.58e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;5.35e-08;5!DOID:3001;7.58e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,5.35e-08,5;DOID:3001,7.58e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002240!2.59e-10!3;UBERON:0001049!3.15e-10!57;UBERON:0005068!3.15e-10!57;UBERON:0006241!3.15e-10!57;UBERON:0007135!3.15e-10!57;UBERON:0001894!1.62e-09!7;UBERON:0006222!1.62e-09!7;UBERON:0003075!3.56e-09!86;UBERON:0007284!3.56e-09!86;UBERON:0005743!4.79e-09!86;UBERON:0007023!5.32e-09!115;UBERON:0002346!1.12e-08!90;UBERON:0002022!3.57e-08!1;UBERON:0002336!4.41e-08!1;UBERON:0001018!4.41e-08!1;UBERON:0002473!4.41e-08!1;UBERON:0005340!4.41e-08!1;UBERON:0002316!4.41e-08!1;UBERON:0003544!4.41e-08!1;UBERON:0001020!4.41e-08!1;UBERON:0005970!4.41e-08!1;UBERON:0002437!4.41e-08!1;UBERON:0003296!4.90e-08!4;UBERON:0010133!4.90e-08!4;UBERON:0000073!5.23e-08!94;UBERON:0001016!5.23e-08!94;UBERON:0001017!5.87e-08!82;UBERON:0002363!7.16e-08!1;UBERON:0007647!7.16e-08!1;UBERON:0010115!7.16e-08!1;UBERON:0003076!1.34e-07!15;UBERON:0003057!1.34e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.07e-17;2!UBERON:0002757;1.07e-17;2!UBERON:0010134;1.07e-17;2!UBERON:0005408;1.07e-17;2!UBERON:0001899;1.07e-17;2!UBERON:0001896;2.89e-12;3!UBERON:0005290;2.89e-12;3!UBERON:0003296;1.57e-09;4!UBERON:0010133;1.57e-09;4!UBERON:0002784;1.57e-09;4!UBERON:0000995;7.61e-09;17!UBERON:0003975;2.09e-08;18!UBERON:0004175;2.44e-07;21!UBERON:0000002;7.17e-07;6!UBERON:0001560;7.17e-07;6!UBERON:0002298;8.97e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.27e-17,2;UBERON:0002757,1.27e-17,2;UBERON:0010134,1.27e-17,2;UBERON:0005408,1.27e-17,2;UBERON:0001899,1.27e-17,2;UBERON:0001896,2.89e-12,3;UBERON:0005290,2.89e-12,3;UBERON:0010096,2.89e-12,3;UBERON:0003296,1.70e-09,4;UBERON:0010133,1.70e-09,4;UBERON:0002784,1.70e-09,4;UBERON:0000995,2.44e-07,21;UBERON:0005795,4.79e-07,22;UBERON:0003975,4.79e-07,22;UBERON:0000002,7.17e-07,6;UBERON:0001560,7.17e-07,6;UBERON:0002298,8.97e-07,6 | |||
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|short_description=p@chr2:165701580..165701589,+ | |||
}} | }} |
Latest revision as of 02:04, 29 July 2015
Short description: | p@chr2:165701580..165701589, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:165701580..165701589, + |
Coexpression cluster: | C1882_endometrial_cervical_kidney_pineal_carcinoid_rectal_medulla |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 7.58e-07 | 6 |
stromal cell of endometrium | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.27e-17 | 2 |
regional part of epithalamus | 1.27e-17 | 2 |
secretory circumventricular organ | 1.27e-17 | 2 |
circumventricular organ | 1.27e-17 | 2 |
epithalamus | 1.27e-17 | 2 |
medulla oblongata | 2.89e-12 | 3 |
myelencephalon | 2.89e-12 | 3 |
future myelencephalon | 2.89e-12 | 3 |
gland of diencephalon | 1.70e-09 | 4 |
neuroendocrine gland | 1.70e-09 | 4 |
regional part of diencephalon | 1.70e-09 | 4 |
uterus | 2.44e-07 | 21 |
embryonic uterus | 4.79e-07 | 22 |
internal female genitalia | 4.79e-07 | 22 |
uterine cervix | 7.17e-07 | 6 |
neck of organ | 7.17e-07 | 6 |
brainstem | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 5.35e-08 | 5 |
female reproductive endometrioid cancer | 7.58e-07 | 6 |