FFCP PHASE1:Hg19::chr2:134024419..134024499,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:134024419..134024499,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_at_chr2:134024419..134024499,- | |||
|id=chr2:134024419..134024499,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;9.58e-07;3 | |||
|ontology_enrichment_disease=DOID:171!1.35e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;3.91e-15;10!DOID:3095;8.63e-09;22!DOID:2994;8.63e-09;22!DOID:169;2.98e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.09e-15,10;DOID:3095,8.83e-09,22;DOID:2994,8.83e-09,22;DOID:169,3.00e-08,6;DOID:0050687,8.56e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.06e-21!94;UBERON:0001016!1.06e-21!94;UBERON:0001017!4.34e-18!82;UBERON:0005743!6.01e-18!86;UBERON:0000924!1.82e-14!173;UBERON:0006601!1.82e-14!173;UBERON:0000955!3.74e-14!69;UBERON:0006238!3.74e-14!69;UBERON:0002346!6.41e-14!90;UBERON:0002616!1.22e-13!59;UBERON:0004121!1.36e-12!169;UBERON:0001049!2.99e-12!57;UBERON:0005068!2.99e-12!57;UBERON:0006241!2.99e-12!57;UBERON:0007135!2.99e-12!57;UBERON:0003080!5.23e-12!42;UBERON:0003075!1.07e-11!86;UBERON:0007284!1.07e-11!86;UBERON:0002780!1.27e-11!41;UBERON:0001890!1.27e-11!41;UBERON:0006240!1.27e-11!41;UBERON:0000481!3.09e-10!347;UBERON:0003056!3.50e-10!61;UBERON:0000153!3.78e-10!129;UBERON:0007811!3.78e-10!129;UBERON:0000468!4.92e-10!659;UBERON:0007023!5.50e-10!115;UBERON:0000033!9.03e-10!123;UBERON:0000922!1.36e-08!612;UBERON:0000477!1.43e-08!286;UBERON:0002020!3.10e-08!34;UBERON:0003528!3.10e-08!34;UBERON:0001893!3.40e-08!34;UBERON:0002791!7.17e-08!33;UBERON:0001869!8.82e-08!32;UBERON:0002050!9.20e-08!605;UBERON:0005423!9.20e-08!605;UBERON:0000923!1.40e-07!604;UBERON:0005291!1.40e-07!604;UBERON:0006598!1.40e-07!604;UBERON:0002532!1.40e-07!604;UBERON:0000475!2.47e-07!365;UBERON:0000483!5.18e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;4.12e-09;5!UBERON:0002216;4.12e-09;5!UBERON:0011134;4.12e-09;5!UBERON:0002209;4.12e-09;5!UBERON:0002213;4.12e-09;5!UBERON:0007844;4.12e-09;5!UBERON:0011138;4.12e-09;5!UBERON:0001130;4.12e-09;5!UBERON:0001066;4.12e-09;5!UBERON:0001468;4.12e-09;5!UBERON:0002346;1.00e-08;4!UBERON:0000923;1.00e-08;4!UBERON:0010316;1.00e-08;4!UBERON:0005291;1.00e-08;4!UBERON:0000922;1.18e-08;49!UBERON:0004905;6.78e-08;8!UBERON:0000982;6.78e-08;8!UBERON:0004770;6.78e-08;8!UBERON:0003296;9.90e-08;4!UBERON:0010133;9.90e-08;4!UBERON:0002050;6.30e-07;5!UBERON:0005423;6.30e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,4.88e-10,223;UBERON:0011135,4.15e-09,5;UBERON:0002216,4.15e-09,5;UBERON:0011134,4.15e-09,5;UBERON:0002209,4.15e-09,5;UBERON:0002213,4.15e-09,5;UBERON:0005856,4.15e-09,5;UBERON:0005866,4.15e-09,5;UBERON:0005863,4.15e-09,5;UBERON:0007844,4.15e-09,5;UBERON:0011138,4.15e-09,5;UBERON:0001130,4.15e-09,5;UBERON:0001066,4.15e-09,5;UBERON:0001468,4.15e-09,5;UBERON:0001016,2.22e-08,89;UBERON:0004905,6.86e-08,8;UBERON:0000982,6.86e-08,8;UBERON:0004770,6.86e-08,8;UBERON:0003296,1.30e-07,4;UBERON:0010133,1.30e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,3.58922423584135,4.97096063591874,0,0,0,0,0.123121058076788,0.204000691244253,0,1.43117993565528,0.273748850145768,0.376627918784408,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.443458794925128,0.351339142772504,0.72038491523742,0,0,2.59637914923747,1.91542711029194,0.797747763113191,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.450445921933289,0,0,0,0,0,0,0.993943903390637,0.379891534993739,0.794455084879313,0.286836620748814,0.709336764396714,0,0,0,0.311211035399766,0.134710672069688,0,0.454072282934794,1.72852777344,0.468642863667593,0,0,0,0.117434498643765,0.323745888736263,0.140450806702248,0.204154171254893,0.368502951935304,0.103325781175765,0,0.494533858557114,0,0,0.168336113954066,0.375355559615893,0.277064115484183,0,0,0,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0.103052529238439,1.54584324027377,0.558350568994769,0,0,0,0,0,0,0,0.508681776931463,0,0,0,0.121973706129595,0,0,0.207322110030741,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0.587043471179108,0.144366447761074,0,0.570762456703795,1.58040879591855,1.71697232418975,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0.381988425558278,0,1.71072446022705,0.308482478109971,0,0.571652865261156,0,0,0,0.646358578788889,0,0,3.45719551560332,3.12022310734098,0,0,0.266422179016099,0.142977993658148,1.62786481617433,0.823240336780769,0,0.355391948742546,0,0.602878754119172,0,0,0,0,0,0,0,1.42636905040718,0,0.205476322550383,0,0,0,0,0,2.03275699377971,2.60279707715243,3.09315525111078,1.00509759200609,1.27587750330633,0,0,0,2.20844685094452,2.00068208423871,4.88277042659524,0.207970861530807,0,0.157702415033935,0,0,0,0,0.664225598535437,0.184369168541703,1.12948698808508,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0.177561725313127,0,0.519254429183621,0.232420756919918,0,0.200506470303285,0,4.13332013392584,2.36718518408732,6.16284750309293,0,0,0,0,0,0,0,0.431831832204279,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.9273691048295,0,0,0,0,1.6068392984416,0.096670718292122,0,0,0.137836572484531,0,0,0.0852266274161009,0.0890320356467374,0,0.192190067365106,0.638063562472921,0,0.464845549297286,0.62962469366128,0,0.616067160352178,0,0,0.18532421910392,0,0.372158369359667,2.84741482246853,0.38126038784765,0,0,0,0,2.51821440616641,0.54907405947211,0.353437207037059,0,0,0,0.48763373908959,0.731140468893853,0,13.9229909636145,17.5342735622604,1.13008116620243,1.10273068709225,1.32687795048244,0.876901770507525,0,0,0.811641507850816,0.92947049429925,1.97186921772569,0,2.45622602532803,0.7133421029625,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0.23874448473769,0,0.921482106297696,0.994147647766298,0.984685914873589,5.23150913607658,0,24.4905473428472,0.796991953004279,0.828851746593443,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,2.22273980289274,0,0.185536196323703,5.98841394003583,1.04171104434093,0,0.724999575434793,0.341380344856499,0,0.945550727071745,0,15.7466491226957,0,2.65722415744152,0.844175070377856,0,0,0,4.16832254592548,0,0,0.384751292518985,0.683652335082007,0,0,0,0,3.48070854927077,0,0,0,0,0,0,0,0,0,0,0,0,4.54416143458391,0,0,1.22206028986725,0,0,0,0.67401132980677,4.01288823649394,0.468528891450678,0,0,0,0.394584402849391,1.20990716048664,23.5676026455477,0.505492637027904,0,0.103688191397247,0,0,0.941798755221676,1.19472429772959,0,0,0,0,0,0.34945333648406,2.75177651954586,3.48322792640707,5.48169878146392,4.59846559497972,0.0969890164884194,0,11.2990370390266,1.37041924646751,0.19871461170299,0.443175571691151,0.195551382734803,0.320635281006135,0,0.19980960958213,0.144090417154106,0,1.54435498075768,0,0.869767748958028,0.471388069233591,0,0.104602846312333,0.203996435272644,0,0,0.547621515567972,0,0,0,1.39641200636127,0.458320848023367,0.717873024576814,0,0,0.223171457441873,0.53746777989381,5.04419836959365,0,0,0,0,0,0,0,1.77064427945048,0,0.137539436597234,0.83088067605837,0.2249738915515,0,0.91124334987037,0,0.394028536495991,0.577000469484979,0,3.76503412598974,2.1110671705139,0.714695326373367,0,0,0,0,0,1.19730191562487,0,0,0,0,1.32506888912221,0.775697738169303,0.66116300871345,0,0,0.533937062838473,9.27505400088029,0.828478110694391,0.496166021811951,0,0,0,0,1.0027595760908,0.306345576763462,0.327872630709804,0.157054096250234,0,0.366078794705889,0.250381861413,0.573409195690071,0.332787154610557,0.620964029413834,224.26313723163,0.37494122388632,0,0,0,0,0.28984205722165,0,0,0.554805861502613,0,0,0,0,0,0.15543720058278,0.147855149989634,0.63718706865481,0,0.310525913752519,1.6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| |||
|short_description=p@chr2:134024419..134024499,- | |||
}} |
Latest revision as of 00:27, 29 July 2015
Short description: | p@chr2:134024419..134024499, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:134024419..134024499, - |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 4.88e-10 | 223 |
intervertebral cartilage | 4.15e-09 | 5 |
symphysis | 4.15e-09 | 5 |
nonsynovial joint | 4.15e-09 | 5 |
fibrous joint | 4.15e-09 | 5 |
cartilaginous joint | 4.15e-09 | 5 |
developing mesenchymal condensation | 4.15e-09 | 5 |
pre-cartilage condensation | 4.15e-09 | 5 |
cartilaginous condensation | 4.15e-09 | 5 |
cartilage element | 4.15e-09 | 5 |
post-cranial axial skeletal system | 4.15e-09 | 5 |
vertebral column | 4.15e-09 | 5 |
intervertebral disk | 4.15e-09 | 5 |
intervertebral joint | 4.15e-09 | 5 |
nervous system | 2.22e-08 | 89 |
articulation | 6.86e-08 | 8 |
skeletal joint | 6.86e-08 | 8 |
articular system | 6.86e-08 | 8 |
gland of diencephalon | 1.30e-07 | 4 |
neuroendocrine gland | 1.30e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.09e-15 | 10 |
germ cell and embryonal cancer | 8.83e-09 | 22 |
germ cell cancer | 8.83e-09 | 22 |
neuroendocrine tumor | 3.00e-08 | 6 |
cell type cancer | 8.56e-07 | 143 |