FFCP PHASE1:Hg19::chr2:102600220..102600233,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:102600220..102600233,+ | |||
|coexpression_cluster_id=C524 | |||
|description=CAGE_peak_at_chr2:102600220..102600233,+ | |description=CAGE_peak_at_chr2:102600220..102600233,+ | ||
|id=chr2:102600220..102600233,+ | |id=chr2:102600220..102600233,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.32e-08!43;CL:0002621!3.83e-08!3;CL:0002541!5.09e-08!3;CL:0000128!2.48e-07!7;CL:0000126!2.48e-07!7;CL:0000127!2.48e-07!7;CL:0002453!2.48e-07!7;CL:0002149!4.81e-07!6;CL:0002255!4.81e-07!6;CL:0002605!7.46e-07!3 | |ontology_enrichment_celltype=CL:0002076!1.32e-08!43;CL:0002621!3.83e-08!3;CL:0002541!5.09e-08!3;CL:0000128!2.48e-07!7;CL:0000126!2.48e-07!7;CL:0000127!2.48e-07!7;CL:0002453!2.48e-07!7;CL:0002149!4.81e-07!6;CL:0002255!4.81e-07!6;CL:0002605!7.46e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002149;3.78e-22;6!CL:0002255;3.78e-22;6!CL:0002621;7.87e-20;3!CL:0002076;1.94e-09;42!CL:0002535;2.67e-08;2!CL:0002251;6.29e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,3.27e-22,6;CL:0002255,3.27e-22,6;CL:0002621,7.88e-20,3;CL:0002076,6.18e-12,42;CL:0000223,1.46e-08,58;CL:0002535,2.48e-08,2;CL:0002251,6.56e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0005795;9.22e-07;10 | |||
|ontology_enrichment_disease=DOID:120!4.51e-07!27;DOID:3001!4.81e-07!6 | |ontology_enrichment_disease=DOID:120!4.51e-07!27;DOID:3001!4.81e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:3001;3.78e-22;6!DOID:120;3.12e-13;27!DOID:193;2.55e-12;29!DOID:299;1.73e-09;25!DOID:4468;1.61e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,3.27e-22,6;DOID:120,2.89e-13,27;DOID:193,2.37e-12,29;DOID:299,1.66e-09,25;DOID:4468,1.61e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0008814!4.02e-09!15;UBERON:0005795!6.24e-09!22;UBERON:0001949!3.83e-08!3;UBERON:0000476!5.09e-08!3;UBERON:0000920!5.09e-08!3;UBERON:0000995!1.46e-07!21;UBERON:0003134!1.47e-07!37;UBERON:0000474!1.47e-07!37;UBERON:0000153!2.45e-07!129;UBERON:0007811!2.45e-07!129;UBERON:0003975!3.89e-07!22 | |ontology_enrichment_uberon=UBERON:0008814!4.02e-09!15;UBERON:0005795!6.24e-09!22;UBERON:0001949!3.83e-08!3;UBERON:0000476!5.09e-08!3;UBERON:0000920!5.09e-08!3;UBERON:0000995!1.46e-07!21;UBERON:0003134!1.47e-07!37;UBERON:0000474!1.47e-07!37;UBERON:0000153!2.45e-07!129;UBERON:0007811!2.45e-07!129;UBERON:0003975!3.89e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;7.87e-20;3!UBERON:0002372;1.54e-15;1!UBERON:0001961;1.54e-15;1!UBERON:0001744;1.54e-15;1!UBERON:0001042;1.54e-15;1!UBERON:0001735;1.54e-15;1!UBERON:0000995;1.01e-13;17!UBERON:0003975;5.60e-13;18!UBERON:0000161;3.49e-12;19!UBERON:0000166;3.49e-12;19!UBERON:0004175;3.64e-11;21!UBERON:0003929;4.76e-09;7!UBERON:0002370;1.39e-08;2!UBERON:0005058;1.39e-08;2!UBERON:0009113;1.39e-08;2!UBERON:0006562;2.00e-08;2!UBERON:0000165;2.38e-08;28!UBERON:0006955;2.67e-08;2!UBERON:0004801;2.67e-08;2!UBERON:0003350;5.00e-08;8!UBERON:0001828;5.00e-08;8!UBERON:0010371;1.47e-07;31!UBERON:0003134;5.78e-07;33!UBERON:0000344;5.80e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,7.88e-20,3;UBERON:0002372,1.34e-15,1;UBERON:0001961,1.34e-15,1;UBERON:0001744,1.34e-15,1;UBERON:0001735,1.34e-15,1;UBERON:0000995,3.36e-11,21;UBERON:0005795,1.06e-10,22;UBERON:0003975,1.06e-10,22;UBERON:0000166,1.50e-10,22;UBERON:0004175,1.89e-09,25;UBERON:0006955,2.48e-08,2;UBERON:0004801,2.48e-08,2;UBERON:0000165,4.62e-08,29;UBERON:0000930,4.62e-08,29;UBERON:0003350,5.00e-08,8;UBERON:0001828,5.00e-08,8;UBERON:0004923,1.87e-07,66;UBERON:0000344,5.68e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.86521706326594,0.272746120590835,1.72082757233402,0,0,0,0,0,0,0,3.21620469096443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,2.01057944823262,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.502548796003046,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0.157702415033935,0.585707074963566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764628819135115,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0.893288987462089,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90995587790152,0,0.307160702099232,0,0.281338832821026,0.445234820091624,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.538651809526579,0,0,0,0,0.31900115973192,0.549585560411174,2.13213910407454,0,0,0,0,0,0,0,0,0.632994193584081,3.7543545876604,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,1.99226682220855,0,10.0664648234376,0.0979923974143777,1.91530254476886,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554645257684261,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0,0,0,0,0,0,0,0,0.537052785212442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,1.24329698497822,0.17071847709395,0,0,0,0,0,85.9150757040188,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0.196308467114945,0.594092800654172,0,0,0,0,0,0.357107877211315,0,0.0802413666891683,0,0,0.286679166302903,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0,0.710478008196067,6.82821857254437,0.33639558774184,0.700118741059814,0,0.870866991587845,0.342233301085281,2.89613827962726,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0.813792356631477,0,0.603821380773079,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.86521706326594,0.272746120590835,1.72082757233402,0,0,0,0,0,0,0,3.21620469096443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,2.01057944823262,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.502548796003046,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0.157702415033935,0.585707074963566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764628819135115,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0.893288987462089,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90995587790152,0,0.307160702099232,0,0.281338832821026,0.445234820091624,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.538651809526579,0,0,0,0,0.31900115973192,0.549585560411174,2.13213910407454,0,0,0,0,0,0,0,0,0.632994193584081,3.7543545876604,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,1.99226682220855,0,10.0664648234376,0.0979923974143777,1.91530254476886,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554645257684261,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0,0,0,0,0,0,0,0,0.537052785212442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,1.24329698497822,0.17071847709395,0,0,0,0,0,85.9150757040188,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0.196308467114945,0.594092800654172,0,0,0,0,0,0.357107877211315,0,0.0802413666891683,0,0,0.286679166302903,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0,0.710478008196067,6.82821857254437,0.33639558774184,0.700118741059814,0,0.870866991587845,0.342233301085281,2.89613827962726,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0.813792356631477,0,0.603821380773079,0 | ||
|short_description=p@chr2:102600220..102600233,+ | |short_description=p@chr2:102600220..102600233,+ | ||
}} | }} |
Latest revision as of 22:47, 28 July 2015
Short description: | p@chr2:102600220..102600233, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:102600220..102600233, + |
Coexpression cluster: | C524_serous_endometrioid_endometrial_mesothelioma_gall_clear_papillotubular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 3.27e-22 | 6 |
stromal cell of endometrium | 3.27e-22 | 6 |
gingival epithelial cell | 7.88e-20 | 3 |
endo-epithelial cell | 6.18e-12 | 42 |
endodermal cell | 1.46e-08 | 58 |
epithelial cell of cervix | 2.48e-08 | 2 |
epithelial cell of alimentary canal | 6.56e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 7.88e-20 | 3 |
tonsil | 1.34e-15 | 1 |
mucosa-associated lymphoid tissue | 1.34e-15 | 1 |
lymphoid tissue | 1.34e-15 | 1 |
tonsillar ring | 1.34e-15 | 1 |
uterus | 3.36e-11 | 21 |
embryonic uterus | 1.06e-10 | 22 |
internal female genitalia | 1.06e-10 | 22 |
oral opening | 1.50e-10 | 22 |
internal genitalia | 1.89e-09 | 25 |
uterine epithelium | 2.48e-08 | 2 |
cervix epithelium | 2.48e-08 | 2 |
mouth | 4.62e-08 | 29 |
stomodeum | 4.62e-08 | 29 |
epithelium of mucosa | 5.00e-08 | 8 |
gingiva | 5.00e-08 | 8 |
organ component layer | 1.87e-07 | 66 |
mucosa | 5.68e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 3.27e-22 | 6 |
female reproductive organ cancer | 2.89e-13 | 27 |
reproductive organ cancer | 2.37e-12 | 29 |
adenocarcinoma | 1.66e-09 | 25 |
clear cell adenocarcinoma | 1.61e-08 | 2 |