FFCP PHASE1:Hg19::chr22:38369664..38369689,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:38369664..38369689,+ to FFCP PHASE1:Hg19::chr22:38369664..38369689,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=161bp_to_CU678225_5end | |||
|cluster_id=chr22:38369664..38369689,+ | |||
|coexpression_cluster_id=C327 | |||
|description=CAGE_peak_2_at_CU678225_5end | |||
|id=chr22:38369664..38369689,+ | |||
|ontology_enrichment_celltype=CL:0000148!3.87e-16!10;CL:0000541!3.87e-16!10;CL:0000147!4.69e-11!14;CL:0000710!2.91e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0000148;3.73e-19;10!CL:0000147;1.65e-13;14!CL:0000710;2.90e-09;20!CL:0002567;2.35e-08;3!CL:0002566;6.39e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.58e-19,10;CL:0000541,2.58e-19,10;CL:0000147,1.28e-13,14;CL:0000710,2.43e-09,20;CL:0002567,2.32e-08,3;CL:0002566,6.59e-07,1;CL:0000075,9.49e-07,27 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.53e-14;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;5.88e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,6.07e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.62e-58!115;UBERON:0001049!2.90e-50!57;UBERON:0005068!2.90e-50!57;UBERON:0006241!2.90e-50!57;UBERON:0007135!2.90e-50!57;UBERON:0002616!1.21e-42!59;UBERON:0000955!6.58e-42!69;UBERON:0006238!6.58e-42!69;UBERON:0002780!2.82e-40!41;UBERON:0001890!2.82e-40!41;UBERON:0006240!2.82e-40!41;UBERON:0003080!3.84e-39!42;UBERON:0001893!7.46e-39!34;UBERON:0002020!1.76e-38!34;UBERON:0003528!1.76e-38!34;UBERON:0001017!6.61e-38!82;UBERON:0005743!6.82e-38!86;UBERON:0002791!1.01e-36!33;UBERON:0001869!2.50e-34!32;UBERON:0003075!8.34e-34!86;UBERON:0007284!8.34e-34!86;UBERON:0000073!2.86e-33!94;UBERON:0001016!2.86e-33!94;UBERON:0002346!8.04e-32!90;UBERON:0000153!3.47e-30!129;UBERON:0007811!3.47e-30!129;UBERON:0000033!3.03e-29!123;UBERON:0003056!9.17e-27!61;UBERON:0002619!5.06e-24!22;UBERON:0001950!2.23e-23!20;UBERON:0004121!1.41e-22!169;UBERON:0000924!9.23e-22!173;UBERON:0006601!9.23e-22!173;UBERON:0002308!1.05e-21!9;UBERON:0000125!1.05e-21!9;UBERON:0002420!1.41e-21!9;UBERON:0007245!1.41e-21!9;UBERON:0010009!1.41e-21!9;UBERON:0010011!1.41e-21!9;UBERON:0000454!1.41e-21!9;UBERON:0000956!9.65e-21!25;UBERON:0000203!9.65e-21!25;UBERON:0009663!2.10e-17!7;UBERON:0004111!2.93e-13!241;UBERON:0001872!1.14e-12!5;UBERON:0003076!5.96e-12!15;UBERON:0003057!5.96e-12!15;UBERON:0002298!2.17e-11!8;UBERON:0000025!2.68e-11!194;UBERON:0001871!8.37e-11!7;UBERON:0000477!1.70e-10!286;UBERON:0000200!1.78e-10!6;UBERON:0000369!3.37e-10!4;UBERON:0002435!3.37e-10!4;UBERON:0000204!3.37e-10!4;UBERON:0010082!3.37e-10!4;UBERON:0004733!2.03e-09!12;UBERON:0002028!2.03e-09!12;UBERON:0007277!2.03e-09!12;UBERON:0000475!2.16e-09!365;UBERON:0004732!1.32e-08!13;UBERON:0006331!1.53e-08!3;UBERON:0000988!3.31e-08!3;UBERON:0000349!3.42e-08!5;UBERON:0002771!3.83e-08!3;UBERON:0000064!5.30e-08!219;UBERON:0005383!6.70e-08!3;UBERON:0005382!6.70e-08!3;UBERON:0000062!8.41e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.15e-23;53!UBERON:0002616;1.15e-23;53!UBERON:0001893;2.75e-22;34!UBERON:0002780;1.03e-21;41!UBERON:0001890;1.03e-21;41!UBERON:0003528;1.47e-18;34!UBERON:0002020;1.47e-18;34!UBERON:0000955;5.40e-18;68!UBERON:0002791;1.37e-17;32!UBERON:0001869;2.27e-17;32!UBERON:0001017;5.88e-15;75!UBERON:0001950;3.20e-14;20!UBERON:0000125;3.28e-14;9!UBERON:0002308;3.28e-14;9!UBERON:0002298;9.99e-14;6!UBERON:0002619;7.00e-13;22!UBERON:0001016;1.04e-12;83!UBERON:0009663;4.29e-12;7!UBERON:0001897;1.75e-11;2!UBERON:0010225;1.75e-11;2!UBERON:0000956;2.94e-11;25!UBERON:0000203;2.94e-11;25!UBERON:0001875;4.03e-11;2!UBERON:0006514;4.03e-11;2!UBERON:0007023;6.98e-11;114!UBERON:0004733;2.21e-10;12!UBERON:0002028;2.21e-10;12!UBERON:0001872;1.08e-09;5!UBERON:0004732;1.45e-09;13!UBERON:0002420;1.98e-09;9!UBERON:0007245;1.98e-09;9!UBERON:0010009;1.98e-09;9!UBERON:0010011;1.98e-09;9!UBERON:0000454;1.98e-09;9!UBERON:0000200;3.73e-08;6!UBERON:0000988;1.07e-07;3!UBERON:0001896;1.07e-07;3!UBERON:0001870;1.07e-07;3!UBERON:0005290;1.07e-07;3!UBERON:0011216;1.92e-07;132!UBERON:0001894;3.37e-07;7!UBERON:0002038;5.88e-07;1!UBERON:0009661;5.88e-07;1!UBERON:0002950;5.88e-07;1!UBERON:0001891;5.88e-07;1!UBERON:0002336;7.34e-07;1!UBERON:0011215;7.34e-07;1!UBERON:0001018;7.34e-07;1!UBERON:0002473;7.34e-07;1!UBERON:0005340;7.34e-07;1!UBERON:0003544;7.34e-07;1!UBERON:0005970;7.34e-07;1!UBERON:0002316;7.34e-07;1!UBERON:0001020;7.34e-07;1!UBERON:0002437;7.34e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.80e-42,56;UBERON:0005068,2.80e-42,56;UBERON:0006241,2.80e-42,56;UBERON:0007135,2.80e-42,56;UBERON:0000073,6.51e-41,53;UBERON:0002616,6.51e-41,53;UBERON:0000955,2.48e-40,68;UBERON:0006238,2.48e-40,68;UBERON:0001017,4.32e-36,81;UBERON:0001016,5.25e-32,89;UBERON:0002780,1.91e-31,41;UBERON:0001890,1.91e-31,41;UBERON:0003080,1.91e-31,41;UBERON:0006240,1.91e-31,41;UBERON:0003075,3.31e-30,82;UBERON:0007284,3.31e-30,82;UBERON:0007023,3.35e-29,114;UBERON:0002346,1.42e-28,86;UBERON:0010371,1.89e-27,104;UBERON:0001893,1.23e-25,34;UBERON:0004121,8.73e-24,171;UBERON:0000924,8.73e-24,171;UBERON:0006601,8.73e-24,171;UBERON:0003056,8.64e-23,61;UBERON:0003528,7.12e-22,34;UBERON:0002020,7.12e-22,34;UBERON:0010314,3.06e-20,132;UBERON:0002791,9.38e-20,32;UBERON:0001869,1.36e-19,32;UBERON:0000125,1.99e-14,9;UBERON:0002308,1.99e-14,9;UBERON:0001950,4.09e-14,20;UBERON:0011216,5.61e-14,223;UBERON:0002298,6.05e-14,6;UBERON:0002619,8.74e-13,22;UBERON:0009663,3.27e-12,7;UBERON:0003076,1.05e-11,15;UBERON:0003057,1.05e-11,15;UBERON:0001897,1.21e-11,2;UBERON:0010225,1.21e-11,2;UBERON:0001875,2.54e-11,2;UBERON:0006514,2.54e-11,2;UBERON:0000956,3.57e-11,25;UBERON:0000203,3.57e-11,25;UBERON:0004733,1.72e-10,12;UBERON:0002028,1.72e-10,12;UBERON:0007277,1.72e-10,12;UBERON:0001872,1.10e-09,5;UBERON:0004732,1.15e-09,13;UBERON:0002420,1.61e-09,9;UBERON:0007245,1.61e-09,9;UBERON:0010009,1.61e-09,9;UBERON:0010011,1.61e-09,9;UBERON:0000454,1.61e-09,9;UBERON:0000025,6.05e-09,192;UBERON:0004111,1.13e-08,240;UBERON:0000200,3.89e-08,6;UBERON:0001896,6.89e-08,3;UBERON:0005290,6.89e-08,3;UBERON:0010096,6.89e-08,3;UBERON:0000988,1.01e-07,3;UBERON:0001870,1.19e-07,3;UBERON:0001894,3.27e-07,7;UBERON:0006222,3.27e-07,7;UBERON:0002038,5.90e-07,1;UBERON:0009661,5.90e-07,1;UBERON:0002950,5.90e-07,1;UBERON:0001891,5.90e-07,1;UBERON:0009616,5.90e-07,1;UBERON:0010286,5.90e-07,1;UBERON:0002336,6.96e-07,1;UBERON:0011215,6.96e-07,1;UBERON:0001018,6.96e-07,1;UBERON:0002473,6.96e-07,1;UBERON:0005340,6.96e-07,1;UBERON:0003544,6.96e-07,1;UBERON:0005970,6.96e-07,1;UBERON:0002316,6.96e-07,1;UBERON:0001020,6.96e-07,1;UBERON:0002437,6.96e-07,1 | |||
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|short_description=p2@CU678225 | |||
}} | }} |
Latest revision as of 21:07, 28 July 2015
Short description: | p2@CU678225 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CU678225_5end |
Coexpression cluster: | C327_Melanocyte_corpus_thalamus_substantia_melanoma_globus_optic |
Association with transcript: | 161bp_to_CU678225_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.58e-19 | 10 |
melanoblast | 2.58e-19 | 10 |
pigment cell | 1.28e-13 | 14 |
neurecto-epithelial cell | 2.43e-09 | 20 |
light melanocyte | 2.32e-08 | 3 |
dark melanocyte | 6.59e-07 | 1 |
columnar/cuboidal epithelial cell | 9.49e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
melanoma | 6.07e-12 | 2 |