FFCP PHASE1:Hg19::chr22:35983643..35983660,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:35983643..35983660,- | |||
|coexpression_cluster_id=C1594 | |||
|description=CAGE_peak_at_chr22:35983643..35983660,- | |description=CAGE_peak_at_chr22:35983643..35983660,- | ||
|id=chr22:35983643..35983660,- | |id=chr22:35983643..35983660,- | ||
|ontology_enrichment_celltype=CL:0000066!1.29e-10!254;CL:0002150!1.42e-10!3;CL:0000861!1.42e-10!3;CL:0000083!4.92e-07!4 | |ontology_enrichment_celltype=CL:0000066!1.29e-10!254;CL:0002150!1.42e-10!3;CL:0000861!1.42e-10!3;CL:0000083!4.92e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000319;4.72e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,5.82e-08,1;CL:0000066,5.85e-08,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.33e-22;29 | |||
|ontology_enrichment_disease=DOID:305!1.38e-28!106;DOID:0050687!3.16e-21!143;DOID:162!2.27e-11!235;DOID:14566!6.35e-11!239;DOID:170!4.08e-08!6;DOID:299!1.29e-07!25;DOID:5093!3.43e-07!4;DOID:1612!3.43e-07!4;DOID:1793!4.92e-07!4;DOID:4929!8.90e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:305;4.31e-08;106!DOID:3030;4.72e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.18e-20,106;DOID:0050687,1.08e-13,143;DOID:162,8.31e-09,235;DOID:14566,1.54e-08,239;DOID:3030,5.82e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.57e-27!9;UBERON:0000077!1.41e-18!130;UBERON:0001041!2.18e-16!98;UBERON:0002075!9.48e-15!18;UBERON:0001264!1.87e-14!10;UBERON:0003922!1.87e-14!10;UBERON:0003923!1.87e-14!10;UBERON:0003924!1.87e-14!10;UBERON:0003921!1.87e-14!10;UBERON:0001557!2.23e-14!19;UBERON:0002114!6.45e-14!12;UBERON:0004921!1.21e-13!129;UBERON:0004185!1.21e-13!129;UBERON:0001045!4.94e-13!11;UBERON:0004119!5.07e-13!169;UBERON:0000925!5.07e-13!169;UBERON:0006595!5.07e-13!169;UBERON:0001007!7.23e-13!155;UBERON:0001555!7.23e-13!155;UBERON:0007026!7.23e-13!155;UBERON:0008947!2.57e-12!38;UBERON:0003258!2.57e-12!38;UBERON:0002108!7.37e-12!14;UBERON:0002294!5.19e-10!7;UBERON:0001173!5.19e-10!7;UBERON:0004912!5.19e-10!7;UBERON:0000072!1.26e-09!46;UBERON:0001048!1.43e-09!168;UBERON:0000065!3.97e-09!53;UBERON:0003124!5.41e-07!7;UBERON:0005631!5.74e-07!14;UBERON:0000158!5.74e-07!14;UBERON:0002394!6.20e-07!4;UBERON:0003928!6.20e-07!4;UBERON:0001004!9.30e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.60e-60;9!UBERON:0001557;3.60e-60;9!UBERON:0001264;9.00e-18;10!UBERON:0000072;8.68e-15;37!UBERON:0000065;7.87e-12;44!UBERON:0002075;8.75e-10;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.87e-60,9;UBERON:0001557,5.88e-28,19;UBERON:0001264,1.05e-17,10;UBERON:0008947,1.55e-16,38;UBERON:0003258,1.55e-16,38;UBERON:0000072,4.76e-13,47;UBERON:0000065,3.85e-11,54;UBERON:0002075,9.52e-10,18;UBERON:0001004,1.11e-07,74;UBERON:0001041,1.16e-07,87 | |||
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| ||
|short_description=p@chr22:35983643..35983660,- | |short_description=p@chr22:35983643..35983660,- | ||
}} | }} |
Latest revision as of 20:37, 28 July 2015
Short description: | p@chr22:35983643..35983660, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:35983643..35983660, - |
Coexpression cluster: | C1594_embryonic_cervical_keratoacanthoma_choriocarcinoma_brain_Osteoblast_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 5.82e-08 | 1 |
epithelial cell | 5.85e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.87e-60 | 9 |
upper respiratory tract | 5.88e-28 | 19 |
pancreas | 1.05e-17 | 10 |
respiratory primordium | 1.55e-16 | 38 |
endoderm of foregut | 1.55e-16 | 38 |
segment of respiratory tract | 4.76e-13 | 47 |
respiratory tract | 3.85e-11 | 54 |
viscus | 9.52e-10 | 18 |
respiratory system | 1.11e-07 | 74 |
foregut | 1.16e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.18e-20 | 106 |
cell type cancer | 1.08e-13 | 143 |
cancer | 8.31e-09 | 235 |
disease of cellular proliferation | 1.54e-08 | 239 |
mucinous adenocarcinoma | 5.82e-08 | 1 |