FFCP PHASE1:Hg19::chr22:33255315..33255336,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:33255315..33255336,-
|short_description=p4@CU676956
|description=CAGE_peak_4_at_CU676956_5end
|association_with_transcript=26bp_to_CU676956_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=26bp_to_CU676956_5end | |||
|cluster_id=chr22:33255315..33255336,- | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_4_at_CU676956_5end | |||
|id=chr22:33255315..33255336,- | |||
|ontology_enrichment_celltype=CL:0000057!6.26e-10!75;CL:0002334!1.99e-08!12;CL:0000055!3.54e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0002541;2.47e-11;3!CL:0002570;2.75e-09;8!CL:0002593;7.20e-08;2!CL:0000134;9.88e-08;55!CL:0000349;1.10e-07;19!CL:0000723;1.84e-07;61!CL:0002583;3.35e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.88e-11,3;CL:0002570,2.59e-09,8;CL:0002593,6.65e-08,2;CL:0000349,1.16e-07,19;CL:0002583,2.53e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!6.36e-11!57;UBERON:0005631!1.31e-08!14;UBERON:0000158!1.31e-08!14;UBERON:0003124!1.62e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.47e-11;3!UBERON:0000920;2.47e-11;3!UBERON:0001013;4.82e-10;14!UBERON:0000478;1.78e-09;24!UBERON:0005631;1.36e-08;10!UBERON:0000158;1.36e-08;10!UBERON:0002456;7.20e-08;2!UBERON:0005406;8.09e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,1.01e-11,7;UBERON:0000920,2.88e-11,3;UBERON:0005631,6.91e-11,14;UBERON:0000158,6.91e-11,14;UBERON:0001013,4.27e-10,14;UBERON:0000478,1.84e-09,24;UBERON:0004923,1.04e-08,66;UBERON:0002456,6.65e-08,2;UBERON:0005406,6.88e-08,2 | |||
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| ||
|short_description=p4@CU676956 | |||
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Latest revision as of 20:28, 28 July 2015
Short description: | p4@CU676956 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CU676956_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 26bp_to_CU676956_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.88e-11 | 3 |
mesenchymal stem cell of adipose | 2.59e-09 | 8 |
smooth muscle cell of the internal thoracic artery | 6.65e-08 | 2 |
extraembryonic cell | 1.16e-07 | 19 |
subcutaneous preadipocyte | 2.53e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
chorion | 1.01e-11 | 7 |
egg chorion | 2.88e-11 | 3 |
extraembryonic membrane | 6.91e-11 | 14 |
membranous layer | 6.91e-11 | 14 |
adipose tissue | 4.27e-10 | 14 |
extraembryonic structure | 1.84e-09 | 24 |
organ component layer | 1.04e-08 | 66 |
internal thoracic artery | 6.65e-08 | 2 |
perirenal fat | 6.88e-08 | 2 |