FFCP PHASE1:Hg19::chr22:33255260..33255310,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=52bp_to_CU676956_5end | |association_with_transcript=52bp_to_CU676956_5end | ||
|cluster_id=chr22:33255260..33255310,- | |||
|coexpression_cluster_id=C1492 | |coexpression_cluster_id=C1492 | ||
|description=CAGE_peak_2_at_CU676956_5end | |description=CAGE_peak_2_at_CU676956_5end | ||
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|ontology_enrichment_celltype=CL:0000055!5.00e-11!180;CL:0000057!2.51e-10!75;CL:0002334!1.18e-07!12 | |ontology_enrichment_celltype=CL:0000055!5.00e-11!180;CL:0000057!2.51e-10!75;CL:0002334!1.18e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002334;5.87e-11;12!CL:0000349;4.67e-08;19!CL:0000134;3.18e-07;55!CL:0002620;4.37e-07;23 | |ontology_enrichment_celltype_v019=CL:0002334;5.87e-11;12!CL:0000349;4.67e-08;19!CL:0000134;3.18e-07;55!CL:0002620;4.37e-07;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.70e-12,76;CL:0002334,1.55e-11,12;CL:0000349,2.94e-08,19;CL:0002620,5.39e-07,23;CL:0002595,6.49e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!1.72e-12!57;UBERON:0005631!5.88e-07!14;UBERON:0000158!5.88e-07!14 | |ontology_enrichment_uberon=UBERON:0004923!1.72e-12!57;UBERON:0005631!5.88e-07!14;UBERON:0000158!5.88e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;8.74e-08;10!UBERON:0000158;8.74e-08;10!UBERON:0004457;2.65e-07;9!UBERON:0000042;2.65e-07;9!UBERON:0000478;7.78e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0005631;8.74e-08;10!UBERON:0000158;8.74e-08;10!UBERON:0004457;2.65e-07;9!UBERON:0000042;2.65e-07;9!UBERON:0000478;7.78e-07;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004923,3.69e-13,66;UBERON:0005631,2.24e-11,14;UBERON:0000158,2.24e-11,14;UBERON:0003124,4.81e-09,7;UBERON:0002199,1.32e-07,46;UBERON:0002416,1.32e-07,46;UBERON:0004797,2.30e-07,7;UBERON:0000478,5.34e-07,24;UBERON:0001013,6.09e-07,14;UBERON:0004872,6.16e-07,83;UBERON:0003834,6.49e-07,5;UBERON:0001533,6.49e-07,5 | |||
|phase1_expression=0.908391896352783,0.214100523890983,1.55049844505568,3.00219895059391,2.68176656656373,6.97870819280295,0,1.89515962028049,0,0.245733936501509,0.697801167972428,3.27662058195258,1.58260186937072,0.123766352960047,0.331397375727916,0,0,1.46062018077475,1.95173119516203,0.123121058076788,0.204000691244253,1.25381888591235,0,0,0.376627918784408,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55725123687061,1.44575660953827,0.50133791063589,1.44846518960824,0,4.86634870302636,0.378139268656271,0,0.087834785693126,1.30979075497713,0,0,0.324547393654683,0,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0.775250277507987,0,0,0.402829317109147,0.760272105718513,0.976248230192678,0,0,0,0,0,0,0,0,0,0,0,16.4000744059455,1.2663051166458,1.19168262731897,4.30254931123221,1.41867352879343,0,2.1349799145941,3.20667812942308,0,0.269421344139376,0.326923806226917,0,0,1.87457145467037,1.24864030732128,0,0.298897361103602,0,0,0.140450806702248,0.408308342509787,0.61417158655884,0.103325781175765,0,0.989067717114227,0,0,0.168336113954066,0,0,0.877955241761676,1.22595118319608,0.901428353439581,0.113432183160021,1.61450672119976,2.34913127700424,2.7551147150743,8.70264178644767,0.618315175430633,3.34932702059318,1.67505170698431,2.53164498361899,1.46155507741798,2.01947019395292,1.28869858099219,1.2931684545505,3.19508633264953,1.10827308050404,1.3564847384839,0.193260853163297,0,0,0.121973706129595,0,0,0.207322110030741,0,0,6.25798129319264,2.57296375277154,4.14404764057442,0.464367928031979,1.44375896333917,0.591534000199219,0,0.241011029883482,0.661763836394364,0.217879444092406,0.474541238222193,0.134831308160164,0.392442930250692,0.769494313892781,0,2.80483547606892,0.4115740113314,0,0,0,0,0,0.245976877086227,0.171567810298526,0.439001141634502,0,0.201057944823262,0.0925884451585296,3.25808305310325,1.03993478527958,0,0,0.352226082707465,1.15493158208859,0.462985512576611,1.14152491340759,0,0,0,1.17002132569619,0.148631162288728,0,0.335964256397719,0.141775097242386,1.07470227243418,0.581267877027924,1.53353071666084,0,0.176096868026452,0,0.432359860250884,0,0.253991577168676,0,0,3.4214489204541,0.719792448923265,4.80548892550268,0.285826432630578,0.448524337381443,0,2.12681028880755,1.93907573636667,0,2.535908257668,0,0,0.771622122786426,1.41849132023278,0.799266537048298,0,0.542621605391443,0,0,0.355391948742546,0,0.602878754119172,0,0.799783929456456,1.2162378064119,0,0,0.239624855491583,1.14861935834114,0,0.434343920002738,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.813795071099207,2.49565033836969,2.14114786556594,2.05013139544115,1.05427273493442,0.601892199455438,0,2.0694614258501,1.32845119707087,1.65932251687533,0.955719759148911,0.783204629850962,1.71571711905428,0,0,0,1.5156378572313,4.99306318531491,1.81434175997808,1.48864684691266,1.84154367945675,1.68396056659844,1.28139149255701,2.55853624533352,1.60853921143608,13.3576259800492,2.92998418225046,6.92490728721196,1.39616165223476,1.55776328755086,4.99704627377825,0.241718899183244,0.601519410909855,0.184161977871793,0.34444334449382,0.546273504020151,0.131124414959424,0,0.0770153371044148,0,1.46139224653261,0,1.13733384070897,0.510281115829547,0.647747748306418,1.54227252690289,0,0,0,0,0,0,0,1.53870075069834,2.62411716559765,4.55529752530024,2.26690225624989,0,0,0,0,0,0.96670718292122,1.54048617114644,0.460511024178389,0.137836572484531,0.107420244868274,0.145016693914229,0.340906509664404,0.178064071293475,0.495854746082934,0.384380134730212,0,0.708104465988849,0.929691098594572,6.92587163027408,0,0.924100740528266,1.06461206063404,1.73986598415015,0.18532421910392,0,0,0.632758849437452,0.953150969619124,2.04718233049067,10.2705357128141,0,0,0.179872457583315,0,0,0.202182481573316,1.58510321173008,2.52755073743389,0,12.4293879711955,15.8475220135133,0.136499911407986,0.707027159768564,0,4.96228809191512,1.99031692572366,2.19225442626881,0,3.27947376023316,0.202910376962704,0,0.281695602532241,0.286822704408103,0.687743287091848,0.35667105148125,0,5.48879851773927,6.25660296623814,1.51789269506286,1.39973888097993,0,0,0,1.60044461320525,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89318974933188,0,0,0,3.95572084034114,0,0,0,10.7435018131961,2.07875276582847,6.45037474408387,0,0,0,0,0.844501632511974,3.98495976502139,0.276283915531148,0,0.818149460017238,0,11.5084647434869,0,0,0,1.08507746200627,0,0,0,0.185536196323703,0,0,0,3.62499787717397,0.568967241427498,0,1.89110145414349,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0.219385397153973,0.10893846351899,0.697118721393016,1.46205491157214,0.683652335082007,0.23056390438806,0,0.217294743844016,17.8640649449875,9.15975934018623,21.3213910407454,0,0,0.166211681900156,0,0,0,0,0.635746315921515,0,0,0,0,1.99052386215701,0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| ||
|short_description=p2@CU676956 | |short_description=p2@CU676956 | ||
}} | }} |
Latest revision as of 20:28, 28 July 2015
Short description: | p2@CU676956 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CU676956_5end |
Coexpression cluster: | C1492_chorionic_amniotic_Smooth_basal_spindle_placenta_mesenchymal |
Association with transcript: | 52bp_to_CU676956_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.70e-12 | 76 |
preadipocyte | 1.55e-11 | 12 |
extraembryonic cell | 2.94e-08 | 19 |
skin fibroblast | 5.39e-07 | 23 |
smooth muscle cell of the subclavian artery | 6.49e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
organ component layer | 3.69e-13 | 66 |
extraembryonic membrane | 2.24e-11 | 14 |
membranous layer | 2.24e-11 | 14 |
chorion | 4.81e-09 | 7 |
integument | 1.32e-07 | 46 |
integumental system | 1.32e-07 | 46 |
blood vessel layer | 2.30e-07 | 7 |
extraembryonic structure | 5.34e-07 | 24 |
adipose tissue | 6.09e-07 | 14 |
splanchnic layer of lateral plate mesoderm | 6.16e-07 | 83 |
thoracic segment blood vessel | 6.49e-07 | 5 |
subclavian artery | 6.49e-07 | 5 |