FFCP PHASE1:Hg19::chr21:47407540..47407554,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:47407540..47407554,- | |||
|coexpression_cluster_id=C198 | |||
|description=CAGE_peak_at_chr21:47407540..47407554,- | |description=CAGE_peak_at_chr21:47407540..47407554,- | ||
|id=chr21:47407540..47407554,- | |id=chr21:47407540..47407554,- | ||
|ontology_enrichment_celltype=CL:0000055!3.30e-37!180;CL:0000057!4.55e-27!75;CL:0000183!1.86e-14!59;CL:0000680!3.35e-14!57;CL:0000056!3.35e-14!57;CL:0000355!3.35e-14!57;CL:0000187!5.71e-14!54;CL:0002620!1.44e-12!23;CL:0000048!2.65e-12!430;CL:0000393!8.45e-12!60;CL:0000211!8.45e-12!60;CL:0000723!1.97e-11!436;CL:0000034!5.99e-11!444;CL:0000192!5.24e-10!42;CL:0000514!5.24e-10!42;CL:0002570!5.04e-08!8 | |ontology_enrichment_celltype=CL:0000055!3.30e-37!180;CL:0000057!4.55e-27!75;CL:0000183!1.86e-14!59;CL:0000680!3.35e-14!57;CL:0000056!3.35e-14!57;CL:0000355!3.35e-14!57;CL:0000187!5.71e-14!54;CL:0002620!1.44e-12!23;CL:0000048!2.65e-12!430;CL:0000393!8.45e-12!60;CL:0000211!8.45e-12!60;CL:0000723!1.97e-11!436;CL:0000034!5.99e-11!444;CL:0000192!5.24e-10!42;CL:0000514!5.24e-10!42;CL:0002570!5.04e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0002570;1.01e-13;8!CL:0000723;2.08e-11;61!CL:0000134;5.33e-10;55!CL:0000048;1.40e-09;58!CL:0002620;5.23e-09;23!CL:0000188;2.21e-07;9!CL:0000034;2.97e-07;69!CL:0000057;3.23e-07;73!CL:0000135;6.42e-07;3!CL:0000388;6.42e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.28e-18,76;CL:0000048,5.52e-18,427;CL:0000723,2.35e-17,433;CL:0000034,1.52e-16,441;CL:0002570,5.34e-14,8;CL:0002320,2.06e-13,361;CL:0000187,4.83e-11,55;CL:0000680,3.95e-10,58;CL:0000056,3.95e-10,58;CL:0000355,3.95e-10,58;CL:0000134,6.93e-10,354;CL:0000393,2.59e-09,61;CL:0000211,2.59e-09,61;CL:0002620,5.63e-09,23;CL:0000219,8.63e-08,386;CL:0000188,1.22e-07,9;CL:0000135,6.35e-07,3;CL:0000388,6.35e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.07e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!7.02e-20!83;UBERON:0002329!7.02e-20!83;UBERON:0003077!7.02e-20!83;UBERON:0003059!7.02e-20!83;UBERON:0007282!7.02e-20!83;UBERON:0009618!7.02e-20!83;UBERON:0007285!7.02e-20!83;UBERON:0004290!1.05e-17!70;UBERON:0000486!2.75e-15!82;UBERON:0005256!5.08e-15!143;UBERON:0002385!4.05e-14!63;UBERON:0001015!4.05e-14!63;UBERON:0000383!4.05e-14!63;UBERON:0001134!8.04e-14!61;UBERON:0002036!8.04e-14!61;UBERON:0003082!8.04e-14!61;UBERON:0003102!1.89e-10!95;UBERON:0001013!1.53e-09!14;UBERON:0002199!1.93e-09!45;UBERON:0002416!1.93e-09!45;UBERON:0000475!1.31e-08!365;UBERON:0002100!2.80e-08!216;UBERON:0002097!5.93e-08!40;UBERON:0000481!2.48e-07!347;UBERON:0002384!9.31e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;8.12e-16;14!UBERON:0004905;1.09e-09;8!UBERON:0000982;1.09e-09;8!UBERON:0004770;1.09e-09;8!UBERON:0011135;1.08e-08;5!UBERON:0002216;1.08e-08;5!UBERON:0011134;1.08e-08;5!UBERON:0002209;1.08e-08;5!UBERON:0002213;1.08e-08;5!UBERON:0007844;1.08e-08;5!UBERON:0011138;1.08e-08;5!UBERON:0001130;1.08e-08;5!UBERON:0001066;1.08e-08;5!UBERON:0001468;1.08e-08;5!UBERON:0002384;2.61e-08;198!UBERON:0002199;1.21e-07;46!UBERON:0002416;1.21e-07;46!UBERON:0002204;3.17e-07;70!UBERON:0007846;6.42e-07;3!UBERON:0000043;6.42e-07;3!UBERON:0007845;6.42e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,4.41e-16,14;UBERON:0007524,1.04e-13,73;UBERON:0002384,1.32e-13,371;UBERON:0002329,4.27e-13,71;UBERON:0003059,4.27e-13,71;UBERON:0007282,4.27e-13,71;UBERON:0004290,4.27e-13,71;UBERON:0009618,4.27e-13,71;UBERON:0003077,8.55e-13,72;UBERON:0007285,8.55e-13,72;UBERON:0000486,8.48e-12,83;UBERON:0007503,3.69e-11,78;UBERON:0003104,3.13e-10,160;UBERON:0009142,3.13e-10,160;UBERON:0001134,5.25e-10,62;UBERON:0002036,5.25e-10,62;UBERON:0003082,5.25e-10,62;UBERON:0004905,7.70e-10,8;UBERON:0000982,7.70e-10,8;UBERON:0004770,7.70e-10,8;UBERON:0002385,1.75e-09,64;UBERON:0001015,1.75e-09,64;UBERON:0000383,1.75e-09,64;UBERON:0005256,2.26e-09,122;UBERON:0002199,2.30e-09,46;UBERON:0002416,2.30e-09,46;UBERON:0011135,5.47e-09,5;UBERON:0002216,5.47e-09,5;UBERON:0011134,5.47e-09,5;UBERON:0002209,5.47e-09,5;UBERON:0002213,5.47e-09,5;UBERON:0005856,5.47e-09,5;UBERON:0005866,5.47e-09,5;UBERON:0005863,5.47e-09,5;UBERON:0007844,5.47e-09,5;UBERON:0011138,5.47e-09,5;UBERON:0001130,5.47e-09,5;UBERON:0001066,5.47e-09,5;UBERON:0001468,5.47e-09,5;UBERON:0002097,1.50e-07,41;UBERON:0003102,1.58e-07,99;UBERON:0007846,6.35e-07,3;UBERON:0000043,6.35e-07,3;UBERON:0007845,6.35e-07,3 | |||
|phase1_expression=0.908391896352783,0.428201047781966,0.422863212287913,2.00146596706261,1.78784437770915,1.74467704820074,0,3.15859936713415,1.04474251279935,0,0,0,0,1.73272894144065,3.64537113300707,0.672325146451775,3.01347264011988,2.19093027116212,2.43966399395253,0.246242116153576,1.83600622119828,0.940364164434263,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.639312809217652,3.2529523714611,2.50668955317945,2.31754430337318,0,0,0.283604451492204,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.506522046658319,0.397227542439656,4.01571269048339,1.06400514659507,1.12135520028461,1.06748995729705,0.74000264525148,0.933633106199299,0.942974704487816,1.30769522490767,2.11900398702904,2.30470369792,0,2.49728061464256,0.570471821544449,2.39117888882882,0.704606991862589,1.78060238804945,0.98315564691574,0.816616685019573,1.84251475967652,0.826606249406124,2.37600571456411,1.97813543422845,0,1.43723628363248,0.841680569770331,0.250237039743928,0,0.438977620880838,1.83892677479412,2.25357088359895,0.340296549480063,0.717558542755448,2.77624605464138,1.48352330811693,3.90118424909723,1.13357782162283,1.03056216018252,1.8611685633159,1.0126579934476,0.584622030967192,0.504867548488229,0.920498986422993,2.58633690910099,3.19508633264953,0.604512589365842,1.18692414617341,0,0,0,0.243947412259191,0,0,0,0.252320850875628,0,6.25798129319264,15.4377825166292,0,0.928735856063958,3.60939740834793,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0.8231480226628,2.94017422771084,0,0,0.590789906681404,0,0,0.686271241194102,0,0,0,0,0.325808305310325,2.07986957055916,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.179117045405697,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.616964956219941,0,0,0,0,0.07333828582095,0.387815147273333,17.8828222925941,5.071816515336,0.26593811658487,0,0.257207374262142,0,1.5985330740966,2.57360388584666,2.17048642156577,0.823240336780769,1.62868092146868,2.84313558994037,0,0.301439377059586,0,0,0,0,0,0.958499421966331,2.29723871668228,0,0.868687840005475,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82190430954022,1.50051156317903,5.15403545029498,0.623912584592421,0.356857977594324,0.630809660135739,0.585707074963566,0.902838299183157,0,1.03473071292505,0.664225598535437,1.10621501125022,1.56390506042549,1.76221041716467,3.0882908142977,0,0,0,0,0,0.604780586659361,0.744323423456331,0.153461973288062,0.841980283299221,0.768834895534206,0,1.12597744800525,2.96836132889982,0.462629081407967,4.79416658345443,1.23190734020714,0,7.43746422143739,0.241718899183244,0.200506470303285,0,0.803701137152247,1.0925470080403,2.09799063935079,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.165018999841176,0,0,1.6068392984416,1.45006077438183,2.7728751080636,1.84204409671355,1.24052915236078,0.644521469209642,1.45016693914229,1.36362603865761,1.69160867728801,0,0,0,0,0,2.20368642781448,0.6970372701606,0.616067160352178,1.59691809095107,0,0.9266210955196,0,2.232950216158,0.632758849437452,0.38126038784765,0.767693373934002,0.855877976067841,3.5002357271853,0,0.539617372749944,1.09814811894422,0.942499218765491,0,0,2.94880919367287,0.975267478179181,1.46228093778771,0,2.04749867111979,0.848432591722276,0,1.10273068709225,0,0.876901770507525,1.73632660280006,1.31178950409327,0.405820753925408,1.239293992399,1.12678241012897,0.430234056612155,1.47373561519682,0,0,2.11107635297664,1.31717957183961,0,1.39973888097993,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,0,0.597743964753209,0,0,0.102268682502155,0,1.86623752597084,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,0,0.307801034015188,0.113942055847001,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0.611030144933625,0,0,0,0,1.60515529459758,0,0,0,0,0,1.20990716048664,0,0.189559738885464,0,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0.343972064943233,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0.599428828746391,0.144090417154106,0,0,0,0.372757606696298,0.235694034616795,0,0.209205692624666,0,0,0,0,0,0,0,1.11712960508902,0,0,0,0.429226048136571,0,0.201550417460179,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0.0607495566580247,0,0.0788057072991982,0.157363764404994,0.211200673038813,0,0,0.714695326373367,0,0,0,0.864221491201268,0.326587360109409,0,0,0.170388021785422,0.226624183040251,0.146552233678082,2.65013777824443,0,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1763290984908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| ||
|short_description=p@chr21:47407540..47407554,- | |short_description=p@chr21:47407540..47407554,- | ||
}} | }} |
Latest revision as of 18:42, 28 July 2015
Short description: | p@chr21:47407540..47407554, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:47407540..47407554, - |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.28e-18 | 76 |
multi fate stem cell | 5.52e-18 | 427 |
somatic stem cell | 2.35e-17 | 433 |
stem cell | 1.52e-16 | 441 |
mesenchymal stem cell of adipose | 5.34e-14 | 8 |
connective tissue cell | 2.06e-13 | 361 |
muscle cell | 4.83e-11 | 55 |
muscle precursor cell | 3.95e-10 | 58 |
myoblast | 3.95e-10 | 58 |
multi-potent skeletal muscle stem cell | 3.95e-10 | 58 |
mesenchymal cell | 6.93e-10 | 354 |
electrically responsive cell | 2.59e-09 | 61 |
electrically active cell | 2.59e-09 | 61 |
skin fibroblast | 5.63e-09 | 23 |
motile cell | 8.63e-08 | 386 |
cell of skeletal muscle | 1.22e-07 | 9 |
fibrocyte | 6.35e-07 | 3 |
tendon cell | 6.35e-07 | 3 |