FFCP PHASE1:Hg19::chr21:47406935..47406993,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:47406935..47406993,- to FFCP PHASE1:Hg19::chr21:47406935..47406993,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:47406935..47406993,- | |||
|coexpression_cluster_id=C198 | |||
|description=CAGE_peak_at_chr21:47406935..47406993,- | |||
|id=chr21:47406935..47406993,- | |||
|ontology_enrichment_celltype=CL:0000055!1.02e-46!180;CL:0000057!1.45e-23!75;CL:0000680!2.11e-19!57;CL:0000056!2.11e-19!57;CL:0000355!2.11e-19!57;CL:0000393!2.48e-19!60;CL:0000211!2.48e-19!60;CL:0000183!1.36e-18!59;CL:0000187!1.49e-18!54;CL:0000192!3.96e-15!42;CL:0000514!3.96e-15!42;CL:0000359!6.99e-11!32;CL:0002620!2.43e-10!23;CL:0000222!1.59e-09!119;CL:0000048!1.75e-09!430;CL:0000723!6.37e-09!436;CL:0000034!8.42e-09!444;CL:0002371!2.95e-08!591;CL:0000144!3.32e-08!625;CL:0002334!3.48e-07!12;CL:0002570!9.42e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.00e-14;23!CL:0000187;1.44e-12;55!CL:0000057;1.83e-12;73!CL:0000192;2.03e-11;43!CL:0000134;2.70e-11;55!CL:0000723;5.03e-11;61!CL:0000393;1.24e-10;61!CL:0000211;1.24e-10;61!CL:0000048;1.10e-09;58!CL:0002334;1.13e-09;12!CL:0000359;1.35e-09;32!CL:0002320;2.09e-09;188!CL:0002570;4.71e-09;8!CL:0000499;4.50e-08;28!CL:0000034;5.12e-08;69!CL:0000188;3.20e-07;9!CL:0002539;5.41e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.73e-30,76;CL:0000048,1.79e-25,427;CL:0000723,2.07e-24,433;CL:0000034,4.81e-23,441;CL:0000680,6.12e-22,58;CL:0000056,6.12e-22,58;CL:0000355,6.12e-22,58;CL:0000187,1.62e-21,55;CL:0000393,7.65e-19,61;CL:0000211,7.65e-19,61;CL:0000192,5.70e-16,43;CL:0000514,5.70e-16,43;CL:0002620,9.90e-15,23;CL:0002320,2.61e-13,361;CL:0000134,2.39e-10,354;CL:0000359,8.59e-10,32;CL:0002334,9.01e-10,12;CL:0002570,3.83e-09,8;CL:0000219,6.68e-09,386;CL:0000499,4.10e-08,28;CL:0000222,5.86e-08,121;CL:0000188,4.15e-07,9;CL:0002539,6.35e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000355;8.99e-12;58!CL:0000514;2.03e-11;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.66e-23!83;UBERON:0002329!1.66e-23!83;UBERON:0003077!1.66e-23!83;UBERON:0003059!1.66e-23!83;UBERON:0007282!1.66e-23!83;UBERON:0009618!1.66e-23!83;UBERON:0007285!1.66e-23!83;UBERON:0004290!1.10e-22!70;UBERON:0000486!4.53e-21!82;UBERON:0002385!1.60e-18!63;UBERON:0001015!1.60e-18!63;UBERON:0000383!1.60e-18!63;UBERON:0005256!2.56e-18!143;UBERON:0001134!2.67e-18!61;UBERON:0002036!2.67e-18!61;UBERON:0003082!2.67e-18!61;UBERON:0000475!1.60e-12!365;UBERON:0002100!3.67e-11!216;UBERON:0003102!2.11e-10!95;UBERON:0002199!2.46e-09!45;UBERON:0002416!2.46e-09!45;UBERON:0001013!2.75e-09!14;UBERON:0000490!2.22e-08!138;UBERON:0000481!5.10e-08!347;UBERON:0001135!2.34e-07!15;UBERON:0000468!3.13e-07!659;UBERON:0004872!4.33e-07!84;UBERON:0003104!4.65e-07!238;UBERON:0009142!4.65e-07!238;UBERON:0002097!5.69e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.17e-11;14!UBERON:0002385;2.67e-11;31!UBERON:0001015;2.67e-11;31!UBERON:0000383;2.67e-11;31!UBERON:0002384;5.27e-10;198!UBERON:0002199;8.84e-10;46!UBERON:0002416;8.84e-10;46!UBERON:0002204;2.10e-09;70!UBERON:0004905;2.99e-09;8!UBERON:0000982;2.99e-09;8!UBERON:0004770;2.99e-09;8!UBERON:0003102;6.32e-09;50!UBERON:0002097;1.73e-08;41!UBERON:0002067;1.40e-07;9!UBERON:0001135;2.05e-07;15!UBERON:0004457;2.30e-07;9!UBERON:0000042;2.30e-07;9!UBERON:0004237;5.41e-07;10!UBERON:0004695;5.41e-07;10!UBERON:0002111;5.41e-07;10!UBERON:0004178;5.41e-07;10!UBERON:0011135;8.20e-07;5!UBERON:0002216;8.20e-07;5!UBERON:0011134;8.20e-07;5!UBERON:0002209;8.20e-07;5!UBERON:0002213;8.20e-07;5!UBERON:0007844;8.20e-07;5!UBERON:0011138;8.20e-07;5!UBERON:0001130;8.20e-07;5!UBERON:0001066;8.20e-07;5!UBERON:0001468;8.20e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,9.40e-27,73;UBERON:0002329,1.51e-26,71;UBERON:0003059,1.51e-26,71;UBERON:0007282,1.51e-26,71;UBERON:0004290,1.51e-26,71;UBERON:0009618,1.51e-26,71;UBERON:0003077,6.58e-26,72;UBERON:0007285,6.58e-26,72;UBERON:0007503,2.28e-24,78;UBERON:0000486,1.56e-23,83;UBERON:0001134,1.66e-20,62;UBERON:0002036,1.66e-20,62;UBERON:0003082,1.66e-20,62;UBERON:0005256,3.86e-20,122;UBERON:0003104,9.91e-20,160;UBERON:0009142,9.91e-20,160;UBERON:0002385,2.25e-19,64;UBERON:0001015,2.25e-19,64;UBERON:0000383,2.25e-19,64;UBERON:0002199,4.66e-15,46;UBERON:0002416,4.66e-15,46;UBERON:0002384,2.74e-13,371;UBERON:0003102,1.69e-12,99;UBERON:0000490,6.12e-12,148;UBERON:0001013,1.53e-11,14;UBERON:0002097,2.04e-11,41;UBERON:0002100,1.25e-10,199;UBERON:0000926,6.72e-10,315;UBERON:0004120,6.72e-10,315;UBERON:0006603,6.72e-10,315;UBERON:0004905,3.30e-09,8;UBERON:0000982,3.30e-09,8;UBERON:0004770,3.30e-09,8;UBERON:0002204,4.24e-08,167;UBERON:0002067,6.77e-08,9;UBERON:0004016,6.77e-08,9;UBERON:0010083,6.77e-08,9;UBERON:0001135,2.80e-07,15;UBERON:0004237,6.35e-07,10;UBERON:0004695,6.35e-07,10;UBERON:0002111,6.35e-07,10;UBERON:0004178,6.35e-07,10;UBERON:0011135,8.42e-07,5;UBERON:0002216,8.42e-07,5;UBERON:0011134,8.42e-07,5;UBERON:0002209,8.42e-07,5;UBERON:0002213,8.42e-07,5;UBERON:0005856,8.42e-07,5;UBERON:0005866,8.42e-07,5;UBERON:0005863,8.42e-07,5;UBERON:0007844,8.42e-07,5;UBERON:0011138,8.42e-07,5;UBERON:0001130,8.42e-07,5;UBERON:0001066,8.42e-07,5;UBERON:0001468,8.42e-07,5 | |||
|phase1_expression=2.18014055124668,1.71280419112787,2.96004248601539,6.00439790118782,4.46961094427288,2.61701557230111,2.53299878168311,5.68547886084148,7.05201196139564,0.245733936501509,0,0,0,9.65377553088364,12.5931002776608,6.05092631806598,4.82155622419182,5.11217063271161,6.8310591830671,0.246242116153576,1.63200552995402,3.76145665773705,0.85870796139317,0.273748850145768,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,1.66221330396589,15.9033227049209,8.52274448081012,6.66293987219789,0,1.45990461090791,0.567208902984407,0.221729397462564,0.43917392846563,0.392937226493138,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,3.97577561356255,2.02608818663328,2.78059279707759,4.87622255272983,0,3.92474320099615,0,4.9333509683432,0.311211035399766,0.67355336034844,1.47115712802113,1.21085942115945,17.86145365888,0.937285727335186,5.93104145977609,1.71141546463335,7.92078006924546,1.87895197830024,3.72307772046703,2.24721290723598,3.26646674007829,3.0708579327942,2.16984140469107,9.50402285825643,8.65434252474949,0.910161361938026,7.18618141816238,2.86171393721913,0.625592599359821,0,0.438977620880838,6.43624371177941,6.00952235626387,1.47461838108027,2.33206526395521,9.61008249683553,6.99375273826554,9.60291507470087,2.37020817248409,3.60696756063881,2.41951913231067,4.55696097051419,2.04617710838517,3.02920529092937,4.32634523618807,3.55621325001386,3.19508633264953,2.11579406278045,2.37384829234683,0.193260853163297,0.272746120590835,0.286804595389004,0.609868530647977,0,0.580969714347592,0.621966330092223,0.504641701751257,0.72995471815166,4.69348596989448,55.961961622781,2.76269842704961,5.57241513638375,12.9938306700525,0,0,0,0,0,0,0,0,0,0,1.40241773803446,2.8810180793198,2.94017422771084,0,0,0.590789906681404,0,0,0.171567810298526,0.109750285408626,0,0,0.185176890317059,1.95484983186195,13.5191522086345,0,0.463721619900307,0.234817388471643,0,0,0,0,0,0,0,0.297262324577456,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0.126995788584338,0,0,3.4214489204541,1.64523988325318,0,0,0.112131084345361,0.43596006883328,1.39342743059805,1.03417372606222,25.0359512096318,13.524844040896,1.86156681609409,1.04007436911366,2.05765899409714,1.41849132023278,1.0656887160644,7.43485567022367,12.4802969240032,0,10.0978217131058,11.727934308504,3.16780749173372,0.301439377059586,0,0.199945982364114,0,0,0,5.5113716763064,3.44585807502342,0,3.04040744001916,2.05476322550383,0.537182889719687,0,0,0,0,0,0,0.773288812777695,0.167516265334349,1.27587750330633,0,0,0,5.39842563564216,10.0034104211935,15.4621063508849,5.61521326133179,4.46072471992904,2.20783381047509,1.63997980989798,1.50473049863859,0,0,1.99267679560631,2.21243002250044,4.51794795234031,5.87403472388222,11.6668764095691,0.206768026122887,0,0,0,0,0.907170879989041,1.48864684691266,2.455391572609,3.36792113319688,1.66580894032411,2.04682899626681,1.60853921143608,4.45254199334973,7.24785560872481,15.8029935528683,6.89868110515997,3.63478100428535,23.9393379627516,0,0,0,3.09999010044438,4.18809686415449,6.94959399284948,0.451199612907412,0.0770153371044148,3.13739907670742,0,0,0,0,0.647747748306418,1.54227252690289,0,1.50506932156456,0,0,0.223874754722178,0,0,0.512900250232778,0,0.650756789328606,0.309123034943167,0.54941678891006,0.742585499285292,0,0,9.64103579064957,9.28038895604371,6.932187770159,7.06116903740196,3.1702411671442,3.00776685631166,5.22060098091223,3.57951835147624,8.36901135079331,0,0,0,0,0.464845549297286,3.77774816196768,2.0911118104818,4.00443654228915,2.12922412126809,2.60979897622522,3.15051172476664,0.143124886741991,3.72158369359667,2.21465597303108,4.00323407240032,2.303080121802,2.1396949401696,4.45484547096312,2.35484592059769,4.67668389716618,3.0199073270966,3.06312246098785,0.202182481573316,0,4.21258456238981,2.43816869544795,2.19342140668156,3.16950440270266,6.27899592476734,3.53513579884282,4.52032466480971,3.85955740482287,0.66343897524122,0.876901770507525,1.15755106853338,7.87073702455959,1.01455188481352,0.6196469961995,1.12678241012897,0.286822704408103,5.60019533774791,0.35667105148125,1.41904425628239,8.86652068250189,7.24448764511784,2.27683904259429,4.54915136318478,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.5745161103971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0.111443384277478,0.284136146806413,1.90995587790152,0,0,0,0.140669416410513,0.445234820091624,0,0,2.39097585901284,0,0,0.20453736500431,0,8.3980688668688,0,0,0,0.591860433821602,0,0,0,0.278304294485554,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,1.18219047581419,0,0,0,1.30815439456455,0.227884111694002,0,0,0.217294743844016,0.638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| ||
|short_description=p@chr21:47406935..47406993,- | |||
}} | }} |
Latest revision as of 18:42, 28 July 2015
Short description: | p@chr21:47406935..47406993, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:47406935..47406993, - |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.73e-30 | 76 |
multi fate stem cell | 1.79e-25 | 427 |
somatic stem cell | 2.07e-24 | 433 |
stem cell | 4.81e-23 | 441 |
muscle precursor cell | 6.12e-22 | 58 |
myoblast | 6.12e-22 | 58 |
multi-potent skeletal muscle stem cell | 6.12e-22 | 58 |
muscle cell | 1.62e-21 | 55 |
electrically responsive cell | 7.65e-19 | 61 |
electrically active cell | 7.65e-19 | 61 |
smooth muscle cell | 5.70e-16 | 43 |
smooth muscle myoblast | 5.70e-16 | 43 |
skin fibroblast | 9.90e-15 | 23 |
connective tissue cell | 2.61e-13 | 361 |
mesenchymal cell | 2.39e-10 | 354 |
vascular associated smooth muscle cell | 8.59e-10 | 32 |
preadipocyte | 9.01e-10 | 12 |
mesenchymal stem cell of adipose | 3.83e-09 | 8 |
motile cell | 6.68e-09 | 386 |
stromal cell | 4.10e-08 | 28 |
mesodermal cell | 5.86e-08 | 121 |
cell of skeletal muscle | 4.15e-07 | 9 |
aortic smooth muscle cell | 6.35e-07 | 10 |